| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Dechlorosoma suillum PS | 1.0 | Dsui_0412 | | ABC-type dipeptide/oligopeptide/nickel transport system, permease component | 1.0 | Dsui_1879 | | luciferase family oxidoreductase, group 1 | 0.94 | 13 |
| Rhodopseudomonas palustris CGA009 | 0.66 | TX73_003925 | | ABC transporter permease | 0.35 | TX73_019170 | | LLM class flavin-dependent oxidoreductase | low | > 86 |
| Bosea sp. OAE506 | 0.61 | ABIE41_RS17330 | | ABC transporter permease | 0.53 | ABIE41_RS08380 | | LLM class flavin-dependent oxidoreductase | low | > 77 |
| Cupriavidus basilensis FW507-4G11 | 0.60 | RR42_RS07945 | | ABC transporter permease | 0.51 | RR42_RS21685 | | hypothetical protein | low | > 128 |
| Klebsiella michiganensis M5al | 0.58 | BWI76_RS07525 | | ABC transporter permease | 0.48 | BWI76_RS24980 | | LLM class flavin-dependent oxidoreductase | low | > 92 |
| Azospirillum brasilense Sp245 | 0.34 | AZOBR_RS26245 | | ABC transporter permease | 0.54 | AZOBR_RS02685 | | alkane 1-monooxygenase | low | > 97 |
| Escherichia coli Nissle 1917 | 0.33 | ECOLIN_RS19875 | | nickel ABC transporter permease subunit NikB | 0.47 | ECOLIN_RS18150 | | luciferase-like monooxygenase | low | > 52 |
| Escherichia coli ECOR27 | 0.33 | NOLOHH_08440 | nikB | nickel ABC transporter permease subunit NikB | 0.47 | NOLOHH_09965 | yhbW | luciferase-like monooxygenase | low | > 57 |
| Escherichia fergusonii Becca | 0.33 | EFB2_00339 | | Nickel transport system permease protein NikB | 0.47 | EFB2_00663 | | hypothetical protein | low | > 86 |
| Escherichia coli BW25113 | 0.33 | b3477 | nikB | nickel transporter subunit (NCBI) | 0.47 | b3160 | yhbW | predicted enzyme (NCBI) | low | > 76 |
| Escherichia coli BL21 | 0.33 | ECD_03326 | | nickel ABC transporter permease | 0.47 | ECD_03027 | | putative luciferase-like monooxygenase | low | > 60 |
| Azospirillum sp. SherDot2 | 0.33 | MPMX19_02826 | | Dipeptide transport system permease protein DppB | 0.49 | MPMX19_05887 | | hypothetical protein | low | > 112 |
| Escherichia coli ECRC62 | 0.33 | BNILDI_03075 | nikB | nickel ABC transporter permease subunit NikB | 0.47 | BNILDI_01565 | yhbW | luciferase-like monooxygenase | — | — |
| Acidovorax sp. GW101-3H11 | 0.33 | Ac3H11_697 | | Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) | 0.71 | Ac3H11_4052 | | Bacterial luciferase family protein | low | > 79 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.33 | OHPLBJKB_00226 | | Nickel transport system permease protein NikB | 0.47 | OHPLBJKB_00540 | | hypothetical protein | low | > 73 |
| Escherichia coli ECOR38 | 0.33 | HEPCGN_15465 | nikB | nickel ABC transporter permease subunit NikB | 0.47 | HEPCGN_17040 | yhbW | luciferase-like monooxygenase | low | > 85 |
| Enterobacter asburiae PDN3 | 0.33 | EX28DRAFT_2672 | | ABC-type dipeptide/oligopeptide/nickel transport systems, permease components | 0.47 | EX28DRAFT_3209 | | luciferase family oxidoreductase, group 1 | low | > 76 |
| Escherichia coli ECRC101 | 0.32 | OKFHMN_16545 | nikB | nickel ABC transporter permease subunit NikB | 0.47 | OKFHMN_18165 | yhbW | luciferase-like monooxygenase | — | — |
| Sinorhizobium meliloti 1021 | 0.32 | SM_b20477 | | peptide ABC transporter permease | 0.49 | SMc03968 | | oxidoreductase | low | > 103 |
| Escherichia coli ECRC102 | 0.32 | NIAGMN_14315 | nikB | nickel ABC transporter permease subunit NikB | 0.47 | NIAGMN_15925 | yhbW | luciferase-like monooxygenase | — | — |
| Escherichia coli ECRC99 | 0.32 | KEDOAH_11595 | nikB | nickel ABC transporter permease subunit NikB | 0.47 | KEDOAH_09985 | yhbW | luciferase-like monooxygenase | — | — |
| Escherichia coli ECRC101 | 0.32 | MCAODC_07065 | nikB | nickel ABC transporter permease subunit NikB | 0.47 | MCAODC_08685 | yhbW | luciferase-like monooxygenase | — | — |
| Escherichia coli ECRC98 | 0.32 | JDDGAC_20175 | nikB | nickel ABC transporter permease subunit NikB | 0.47 | JDDGAC_21790 | yhbW | luciferase-like monooxygenase | — | — |
| Rhizobium sp. OAE497 | 0.32 | ABIE40_RS26090 | | ABC transporter permease | 0.47 | ABIE40_RS15705 | | LLM class flavin-dependent oxidoreductase | low | > 107 |
| Ralstonia solanacearum PSI07 | 0.32 | RPSI07_RS03250 | | ABC transporter permease | 0.26 | RPSI07_RS12585 | | LLM class flavin-dependent oxidoreductase | low | > 81 |
| Variovorax sp. SCN45 | 0.32 | GFF1213 | | Oligopeptide transport permease protein OppB-like @ Glutathione ABC transporter, permease protein GsiC | 0.52 | GFF4914 | | Luciferase-like monooxygenase YhbW | low | > 127 |
| Rahnella sp. WP5 | 0.32 | EX31_RS17545 | | ABC transporter permease | 0.52 | EX31_RS08505 | | luciferase-like monooxygenase | low | > 89 |
| Variovorax sp. OAS795 | 0.32 | ABID97_RS22885 | | ABC transporter permease | 0.50 | ABID97_RS04410 | | LLM class flavin-dependent oxidoreductase | low | > 91 |
| Rhodospirillum rubrum S1H | 0.32 | Rru_A0980 | | Binding-protein-dependent transport systems inner membrane component (NCBI) | 0.48 | Rru_A0927 | | luciferase-like (NCBI) | low | > 58 |
| Pseudomonas putida KT2440 | 0.32 | PP_3343 | | nickel ABC transporter permease subunit | 0.57 | PP_0088 | | putative alkanal monooxygenase | low | > 96 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.32 | Psyr_2266 | | Binding-protein-dependent transport systems inner membrane component | 0.57 | Psyr_0039 | | luciferase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.32 | Psyr_2266 | | Binding-protein-dependent transport systems inner membrane component | 0.57 | Psyr_0039 | | luciferase | low | > 86 |
| Pantoea sp. MT58 | 0.31 | IAI47_13120 | | glutathione ABC transporter permease GsiC | 0.46 | IAI47_16975 | | luciferase-like monooxygenase | low | > 76 |
| Ralstonia solanacearum GMI1000 | 0.31 | RS_RS06925 | | glutathione ABC transporter permease GsiC | 0.26 | RS_RS12360 | | LLM class flavin-dependent oxidoreductase | low | > 80 |
| Pectobacterium carotovorum WPP14 | 0.31 | HER17_RS13500 | | glutathione ABC transporter permease GsiC | 0.48 | HER17_RS18170 | | LLM class flavin-dependent oxidoreductase | low | > 75 |
| Paraburkholderia graminis OAS925 | 0.31 | ABIE53_003270 | | glutathione transport system permease protein | 0.49 | ABIE53_001755 | | luciferase family oxidoreductase group 1 | low | > 113 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.31 | GFF729 | | Dipeptide transport system permease protein DppB in protein degradation cluster | 0.48 | GFF1508 | | Luciferase-like monooxygenase (EC 1.14.-.-) | low | > 78 |
| Enterobacter sp. TBS_079 | 0.31 | MPMX20_01471 | | Glutathione transport system permease protein GsiC | 0.48 | MPMX20_04064 | | hypothetical protein | low | > 85 |
| Serratia liquefaciens MT49 | 0.31 | IAI46_07855 | | glutathione ABC transporter permease GsiC | 0.50 | IAI46_01985 | | luciferase-like monooxygenase | low | > 86 |
| Herbaspirillum seropedicae SmR1 | 0.31 | HSERO_RS15950 | | ABC transporter permease | 0.48 | HSERO_RS18895 | | alkane 1-monooxygenase | low | > 78 |
| Paraburkholderia sabiae LMG 24235 | 0.31 | QEN71_RS16855 | | glutathione ABC transporter permease GsiC | 0.51 | QEN71_RS23415 | | LLM class flavin-dependent oxidoreductase | low | > 153 |
| Agrobacterium fabrum C58 | 0.31 | Atu4114 | | dipeptide ABC transporter permease | 0.50 | Atu3726 | | flavin dependent oxidoreductase | low | > 89 |
| Dickeya dadantii 3937 | 0.31 | DDA3937_RS20575 | | ABC transporter permease subunit | 0.52 | DDA3937_RS03105 | | LLM class flavin-dependent oxidoreductase | low | > 74 |
| Dickeya dianthicola 67-19 | 0.30 | HGI48_RS00640 | | ABC transporter permease subunit | 0.53 | HGI48_RS03280 | | luciferase-like monooxygenase | low | > 71 |
| Ralstonia sp. UNC404CL21Col | 0.30 | ABZR87_RS11715 | | glutathione ABC transporter permease GsiC | 0.27 | ABZR87_RS00425 | | LLM class flavin-dependent oxidoreductase | low | > 80 |
| Dickeya dianthicola ME23 | 0.30 | DZA65_RS00695 | | ABC transporter permease subunit | 0.53 | DZA65_RS03275 | | LLM class flavin-dependent oxidoreductase | low | > 75 |
| Pseudomonas sp. S08-1 | 0.30 | OH686_08705 | | Dipeptide ABC transporter, permease protein DppB | 0.59 | OH686_12400 | | Luciferase-like monooxygenase YhbW | low | > 80 |
| Ralstonia solanacearum UW163 | 0.30 | UW163_RS13580 | | glutathione ABC transporter permease GsiC | 0.26 | UW163_RS08870 | | LLM class flavin-dependent oxidoreductase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.30 | RALBFv3_RS00250 | | glutathione ABC transporter permease GsiC | 0.26 | RALBFv3_RS04800 | | LLM class flavin-dependent oxidoreductase | low | > 76 |
| Marinobacter adhaerens HP15 | 0.30 | HP15_2806 | | permease protein, ABC-type oligopeptide transporter | 0.53 | HP15_4079 | | flavin dependent oxidoreductase | low | > 73 |
| Pseudomonas sp. RS175 | 0.30 | PFR28_00051 | | Glutathione transport system permease protein GsiC | 0.58 | PFR28_04710 | | hypothetical protein | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.29 | Pf6N2E2_1810 | | Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) | 0.58 | Pf6N2E2_4053 | | Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases | low | > 103 |
| Pseudomonas fluorescens GW456-L13 | 0.29 | PfGW456L13_5055 | | Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) | 0.59 | PfGW456L13_571 | | Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.29 | AO356_29375 | | ABC transporter permease | 0.58 | AO356_10940 | | hypothetical protein | low | > 104 |
| Castellaniella sp019104865 MT123 | 0.29 | ABCV34_RS13520 | | glutathione ABC transporter permease GsiC | 0.53 | ABCV34_RS14830 | | LLM class flavin-dependent oxidoreductase | low | > 48 |
| Pseudomonas fluorescens FW300-N1B4 | 0.29 | Pf1N1B4_1124 | | Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) | 0.58 | Pf1N1B4_1836 | | Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases | low | > 87 |
| Pseudomonas simiae WCS417 | 0.29 | PS417_04060 | | dipeptide ABC transporter, permease component (from data) | 0.58 | PS417_00210 | | hypothetical protein | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.29 | PFLU_RS04100 | | ABC transporter permease subunit | 0.58 | PFLU_RS00205 | | LLM class flavin-dependent oxidoreductase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.29 | PFLU_RS04100 | | ABC transporter permease subunit | 0.58 | PFLU_RS00205 | | LLM class flavin-dependent oxidoreductase | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.29 | AO353_21870 | | ABC transporter permease | 0.58 | AO353_10735 | | hypothetical protein | low | > 101 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.27 | ABZR88_RS19860 | | ABC transporter permease | 0.28 | ABZR88_RS01305 | | LLM class flavin-dependent oxidoreductase | low | > 71 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.26 | CA265_RS25300 | | ABC transporter permease | 0.49 | CA265_RS05665 | | LLM class flavin-dependent oxidoreductase | low | > 88 |
| Shewanella sp. ANA-3 | 0.23 | Shewana3_2651 | | binding-protein-dependent transport systems inner membrane component (RefSeq) | 0.53 | Shewana3_3090 | | luciferase family protein (RefSeq) | — | — |
| Alteromonas macleodii MIT1002 | 0.23 | MIT1002_02935 | | Glutathione transport system permease protein GsiC | 0.46 | MIT1002_03895 | | Alkanal monooxygenase alpha chain | low | > 70 |
| Acinetobacter radioresistens SK82 | 0.19 | MPMX26_02272 | | Inner membrane ABC transporter permease protein YejB | 0.53 | MPMX26_01171 | | hypothetical protein | — | — |
| Pseudomonas stutzeri RCH2 | 0.17 | Psest_2066 | | ABC-type uncharacterized transport system, permease component | 0.57 | Psest_0077 | | luciferase family oxidoreductase, group 1 | low | > 67 |
Not shown: 11 genomes with orthologs for Dsui_0412 only; 16 genomes with orthologs for Dsui_1879 only