Conservation of cofitness between DDA3937_RS00840 and DDA3937_RS00915 in Dickeya dadantii 3937

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dadantii 3937 1.0 DDA3937_RS00840 CDF family cation-efflux transporter FieF 1.0 DDA3937_RS00915 HslU--HslV peptidase ATPase subunit 0.42 15
Dickeya dianthicola 67-19 0.93 HGI48_RS20535 CDF family cation-efflux transporter FieF 0.98 HGI48_RS20460 HslU--HslV peptidase ATPase subunit low > 71
Dickeya dianthicola ME23 0.93 DZA65_RS21580 CDF family cation-efflux transporter FieF 0.98 DZA65_RS21505 HslU--HslV peptidase ATPase subunit low > 75
Pectobacterium carotovorum WPP14 0.79 HER17_RS00720 CDF family cation-efflux transporter FieF 0.93 HER17_RS00850 HslU--HslV peptidase ATPase subunit low > 75
Klebsiella michiganensis M5al 0.76 BWI76_RS00730 cation-efflux pump FieF 0.88 BWI76_RS00750 ATP-dependent protease ATP-binding subunit HslU low > 92
Enterobacter asburiae PDN3 0.75 EX28DRAFT_4389 cation diffusion facilitator family transporter 0.88 EX28DRAFT_4404 ATP-dependent protease HslVU, ATPase subunit low > 76
Enterobacter sp. TBS_079 0.75 MPMX20_04553 Ferrous-iron efflux pump FieF 0.89 MPMX20_04538 ATP-dependent protease ATPase subunit HslU low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF2282 Cobalt-zinc-cadmium resistance protein 0.88 GFF2313 ATP-dependent hsl protease ATP-binding subunit HslU 0.38 10
Escherichia coli ECRC99 0.74 KEDOAH_14320 fieF CDF family cation-efflux transporter FieF 0.88 KEDOAH_14420 hslU HslU--HslV peptidase ATPase subunit
Escherichia coli ECOR27 0.74 NOLOHH_05970 fieF CDF family cation-efflux transporter FieF 0.88 NOLOHH_05885 hslU HslU--HslV peptidase ATPase subunit low > 75
Escherichia coli ECRC102 0.74 NIAGMN_11590 fieF CDF family cation-efflux transporter FieF 0.88 NIAGMN_11495 hslU HslU--HslV peptidase ATPase subunit
Escherichia coli ECRC100 0.74 OKFHMN_13835 fieF CDF family cation-efflux transporter FieF 0.88 OKFHMN_13740 hslU HslU--HslV peptidase ATPase subunit low > 80
Escherichia coli ECRC98 0.74 JDDGAC_17460 fieF CDF family cation-efflux transporter FieF 0.88 JDDGAC_17365 hslU HslU--HslV peptidase ATPase subunit low > 86
Escherichia coli ECOR38 0.74 HEPCGN_12480 fieF CDF family cation-efflux transporter FieF 0.89 HEPCGN_12385 hslU HslU--HslV peptidase ATPase subunit low > 87
Escherichia coli ECRC101 0.74 MCAODC_04335 fieF CDF family cation-efflux transporter FieF 0.88 MCAODC_04240 hslU HslU--HslV peptidase ATPase subunit low > 87
Escherichia coli BL21 0.74 ECD_03800 ferrous iron and zinc transporter 0.88 ECD_03816 molecular chaperone and ATPase component of HslUV protease low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.74 OHPLBJKB_04136 Ferrous-iron efflux pump FieF 0.88 OHPLBJKB_04120 ATP-dependent protease ATPase subunit HslU low > 73
Escherichia coli Nissle 1917 0.74 ECOLIN_RS22550 CDF family cation-efflux transporter FieF 0.89 ECOLIN_RS22635 HslU--HslV peptidase ATPase subunit low > 55
Escherichia coli BW25113 0.74 b3915 fieF ferrous iron efflux protein F (NCBI) 0.88 b3931 hslU ATP-dependent protease ATP-binding subunit (NCBI) low > 76
Escherichia fergusonii Becca 0.74 EFB2_04703 Ferrous-iron efflux pump FieF 0.89 EFB2_04687 ATP-dependent protease ATPase subunit HslU low > 86
Escherichia coli ECRC62 0.74 BNILDI_05555 fieF CDF family cation-efflux transporter FieF 0.88 BNILDI_05645 hslU HslU--HslV peptidase ATPase subunit low > 75
Serratia liquefaciens MT49 0.74 IAI46_24650 CDF family cation-efflux transporter FieF 0.91 IAI46_24575 HslU--HslV peptidase ATPase subunit low > 86
Pantoea sp. MT58 0.71 IAI47_00775 CDF family cation-efflux transporter FieF 0.87 IAI47_00845 HslU--HslV peptidase ATPase subunit low > 76
Erwinia tracheiphila SCR3 0.67 LU632_RS21845 fieF CDF family cation-efflux transporter FieF 0.87 LU632_RS19675 hslU HslU--HslV peptidase ATPase subunit low > 74
Vibrio cholerae E7946 ATCC 55056 0.60 CSW01_13580 cation-efflux pump FieF 0.77 CSW01_13510 HslU--HslV peptidase ATPase subunit low > 62
Shewanella amazonensis SB2B 0.44 Sama_3430 cation efflux family protein (RefSeq) 0.76 Sama_0440 hslU ATP-dependent protease ATP-binding subunit HslU (RefSeq) low > 62
Magnetospirillum magneticum AMB-1 0.43 AMB_RS04510 ferrous iron transporter 0.54 AMB_RS22955 ATP-dependent protease ATPase subunit HslU low > 64
Shewanella oneidensis MR-1 0.42 SO4475 cation efflux family protein (NCBI ptt file) 0.77 SO4163 hslU heat shock protein HslVU, ATPase subunit HslU (NCBI ptt file) low > 76
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_1393 Cobalt-zinc-cadmium resistance protein 0.69 PfGW456L13_290 ATP-dependent hsl protease ATP-binding subunit HslU
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_4333 Cation efflux protein 0.70 Psyr_0394 Heat shock protein HslU low > 86
Shewanella sp. ANA-3 0.42 Shewana3_0255 cation diffusion facilitator family transporter (RefSeq) 0.77 Shewana3_3700 hslU ATP-dependent protease ATP-binding subunit HslU (RefSeq) low > 73
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_4333 Cation efflux protein 0.70 Psyr_0394 Heat shock protein HslU low > 86
Pseudomonas simiae WCS417 0.41 PS417_24560 ferrous iron transporter 0.68 PS417_01915 ATP-dependent protease ATP-binding subunit HslU 0.19 65
Pseudomonas fluorescens SBW25 0.41 PFLU_RS26490 cation diffusion facilitator family transporter 0.69 PFLU_RS01960 ATP-dependent protease ATPase subunit HslU low > 109
Pseudomonas fluorescens SBW25-INTG 0.41 PFLU_RS26490 cation diffusion facilitator family transporter 0.69 PFLU_RS01960 ATP-dependent protease ATPase subunit HslU low > 109
Pseudomonas stutzeri RCH2 0.41 Psest_0573 cation diffusion facilitator family transporter 0.69 Psest_3937 ATP-dependent protease HslVU, ATPase subunit low > 67
Pseudomonas fluorescens FW300-N2C3 0.41 AO356_15475 ferrous iron transporter 0.69 AO356_09460 ATP-dependent protease ATP-binding subunit HslU low > 104
Pseudomonas putida KT2440 0.40 PP_4774 divalent cation efflux transporter 0.70 PP_5001 protease HslVU, ATPase component low > 96
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_5036 Cobalt-zinc-cadmium resistance protein 0.69 Pf6N2E2_3770 ATP-dependent hsl protease ATP-binding subunit HslU low > 103
Pseudomonas sp. S08-1 0.40 OH686_08810 Ferrous-iron efflux pump FieF 0.69 OH686_10100 ATP-dependent protease HslVU, ATPase subunit low > 80
Pseudomonas sp. RS175 0.39 PFR28_03835 Ferrous-iron efflux pump FieF 0.71 PFR28_04998 ATP-dependent protease ATPase subunit HslU low > 88
Rhodospirillum rubrum S1H 0.39 Rru_A2628 Cation efflux protein (NCBI) 0.54 Rru_A3600 Heat shock protein HslU (NCBI) low > 58
Shewanella loihica PV-4 0.39 Shew_3568 cation diffusion facilitator family transporter (RefSeq) 0.77 Shew_0374 hslU ATP-dependent protease ATP-binding subunit (RefSeq) low > 60
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_2726 Cobalt-zinc-cadmium resistance protein 0.71 Pf1N1B4_1553 ATP-dependent hsl protease ATP-binding subunit HslU
Pseudomonas fluorescens FW300-N2E3 0.39 AO353_06310 ferrous iron transporter 0.71 AO353_12425 ATP-dependent protease ATP-binding subunit HslU
Azospirillum sp. SherDot2 0.37 MPMX19_00714 Ferrous-iron efflux pump FieF 0.57 MPMX19_02549 ATP-dependent protease ATPase subunit HslU low > 112
Sphingomonas koreensis DSMZ 15582 0.35 Ga0059261_1887 cation diffusion facilitator family transporter 0.50 Ga0059261_3339 ATP-dependent protease HslVU, ATPase subunit low > 68
Rahnella sp. WP5 0.32 EX31_RS10790 cation diffusion facilitator family transporter 0.89 EX31_RS14245 HslU--HslV peptidase ATPase subunit low > 89
Caulobacter crescentus NA1000 0.31 CCNA_03756 cation efflux family transporter 0.50 CCNA_03844 ATP-dependent endopeptidase hsl ATP-binding subunit HslU low > 66
Caulobacter crescentus NA1000 Δfur 0.31 CCNA_03756 cation efflux family transporter 0.50 CCNA_03844 ATP-dependent endopeptidase hsl ATP-binding subunit HslU
Brevundimonas sp. GW460-12-10-14-LB2 0.29 A4249_RS11365 cation diffusion facilitator family transporter 0.55 A4249_RS10990 ATP-dependent protease ATPase subunit HslU low > 48
Agrobacterium fabrum C58 0.27 Atu2274 cation efflux system protein 0.55 Atu0045 heat shock chaperone 0.21 89
Phaeobacter inhibens DSM 17395 0.25 PGA1_c01130 putative cation efflux pump 0.55 PGA1_c35240 ATP-dependent hsl protease ATP-binding subunit HslU low > 62
Sinorhizobium meliloti 1021 0.23 SMc02724 hypothetical protein 0.57 SMc02577 ATP-dependent protease ATP-binding subunit HslU low > 103
Dechlorosoma suillum PS 0.21 Dsui_0813 cation diffusion facilitator family transporter 0.68 Dsui_0580 ATP-dependent protease HslVU, ATPase subunit low > 51
Acidovorax sp. GW101-3H11 0.20 Ac3H11_4676 Cobalt-zinc-cadmium resistance protein 0.68 Ac3H11_2005 ATP-dependent hsl protease ATP-binding subunit HslU low > 79
Variovorax sp. SCN45 0.19 GFF2069 Cobalt-zinc-cadmium resistance protein 0.66 GFF4483 ATP-dependent hsl protease ATP-binding subunit HslU low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.19 GFF1671 Cobalt-zinc-cadmium resistance protein 0.68 GFF553 ATP-dependent hsl protease ATP-binding subunit HslU low > 90
Cupriavidus basilensis FW507-4G11 0.18 RR42_RS30535 cobalt transporter 0.67 RR42_RS01065 ATP-dependent protease ATP-binding subunit HslU low > 128
Herbaspirillum seropedicae SmR1 0.18 HSERO_RS02620 cobalt transporter 0.65 HSERO_RS00915 ATP-dependent protease low > 78
Variovorax sp. OAS795 0.17 ABID97_RS24945 cation diffusion facilitator family transporter 0.66 ABID97_RS06185 ATP-dependent protease ATPase subunit HslU low > 91
Echinicola vietnamensis KMM 6221, DSM 17526 0.16 Echvi_4463 cation diffusion facilitator family transporter 0.50 Echvi_4669 ATP-dependent protease HslVU, ATPase subunit low > 79
Castellaniella sp019104865 MT123 0.16 ABCV34_RS08935 cation diffusion facilitator family transporter 0.65 ABCV34_RS13410 ATP-dependent protease ATPase subunit HslU low > 48
Pontibacter actiniarum KMM 6156, DSM 19842 0.15 CA264_04200 cation-efflux pump 0.50 CA264_00055 ATP-dependent protease ATP-binding subunit HslU low > 74
Lysobacter sp. OAE881 0.10 ABIE51_RS09615 cation diffusion facilitator family transporter 0.63 ABIE51_RS03045 ATP-dependent protease ATPase subunit HslU low > 62

Not shown: 13 genomes with orthologs for DDA3937_RS00840 only; 23 genomes with orthologs for DDA3937_RS00915 only