Conservation of cofitness between CSW01_18820 and CSW01_14125 in Vibrio cholerae E7946 ATCC 55056

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_18820 EamA/RhaT family transporter 1.0 CSW01_14125 1,4-alpha-glucan branching enzyme 0.58 13
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS23240 DMT family transporter 0.45 ABZR87_RS17215 1,4-alpha-glucan branching protein GlgB low > 80
Shewanella oneidensis MR-1 0.42 SO1091 membrane protein, putative (NCBI ptt file) 0.43 SO1494 glgB 1,4-alpha-glucan branching enzyme (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.41 Shewana3_0924 hypothetical protein (RefSeq) 0.42 Shewana3_2934 glycogen branching enzyme (RefSeq) low > 73
Agrobacterium fabrum C58 0.39 Atu5339 hypothetical protein 0.43 Atu4077 glycogen branching protein
Ralstonia solanacearum PSI07 0.39 RPSI07_RS07660 EamA/RhaT family transporter 0.43 RPSI07_RS00885 1,4-alpha-glucan branching protein GlgB low > 81
Serratia liquefaciens MT49 0.39 IAI46_17860 DMT family transporter 0.44 IAI46_23940 1,4-alpha-glucan branching protein GlgB low > 87
Pseudomonas putida KT2440 0.38 PP_4853 putative permease of the drug/metabolite transporter (DMT) superfamily 0.47 PP_4058 1,4-alpha-glucan branching enzyme low > 96
Variovorax sp. SCN45 0.38 GFF4546 Permease of the drug/metabolite transporter (DMT) superfamily 0.42 GFF6333 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) low > 127
Pectobacterium carotovorum WPP14 0.38 HER17_RS06975 DMT family transporter 0.44 HER17_RS01485 1,4-alpha-glucan branching enzyme 0.43 52
Pantoea agglomerans CFBP13505 P0401 0.37 PagCFBP13505_RS00180 DMT family transporter 0.43 PagCFBP13505_RS18195 1,4-alpha-glucan branching enzyme low > 74
Ralstonia solanacearum GMI1000 0.37 RS_RS24970 EamA/RhaT family transporter 0.44 RS_RS18305 glycogen-branching enzyme low > 80
Pantoea sp. MT58 0.37 IAI47_06225 DMT family transporter 0.44 IAI47_01680 1,4-alpha-glucan branching enzyme low > 76
Herbaspirillum seropedicae SmR1 0.36 HSERO_RS07675 multidrug DMT transporter 0.43 HSERO_RS11650 glycogen branching protein low > 78
Rahnella sp. WP5 0.36 EX31_RS19620 DMT family transporter 0.45 EX31_RS05025 1,4-alpha-glucan branching enzyme low > 89
Pseudomonas sp. BP01 0.35 JOY50_RS17455 DMT family transporter 0.47 JOY50_RS06760 glgB 1,4-alpha-glucan branching protein GlgB low > 84
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_1363 Permease of the drug/metabolite transporter (DMT) superfamily 0.45 Pf1N1B4_4678 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) low > 87
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_13445 hypothetical protein 0.44 AO353_22945 glycogen branching protein low > 101
Pseudomonas aeruginosa MRSN321 0.33 DY961_RS25070 DMT family transporter 0.46 DY961_RS17020 glgB;go_function=1%2C4-alpha-glucan 1 4-alpha-glucan branching protein GlgB low > 100
Pseudomonas sp. SVBP6 0.33 COO64_RS18100 DMT family transporter 0.46 COO64_RS24775 glgB 1,4-alpha-glucan branching protein GlgB low > 93
Pseudomonas aeruginosa PA14 0.33 IKLFDK_02675 EamA family transporter 0.46 IKLFDK_10535 1 4-alpha-glucan branching protein GlgB low > 98
Pseudomonas aeruginosa PUPa3 0.33 DQ20_RS57525 DMT family transporter 0.46 DQ20_RS39285 glgB;go_function=1%2C4-alpha-glucan 1 4-alpha-glucan branching protein GlgB low > 101
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_101 Permease of the drug/metabolite transporter (DMT) superfamily 0.44 PfGW456L13_3253 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) low > 87
Pseudomonas lactucae CFBP13502 0.32 GEMAOFIL_00785 hypothetical protein 0.45 GEMAOFIL_02810 1,4-alpha-glucan branching enzyme GlgB low > 96
Pseudomonas syringae pv. syringae B728a 0.32 Psyr_4444 Protein of unknown function DUF6 0.46 Psyr_2491 glycogen branching enzyme low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.32 Psyr_4444 Protein of unknown function DUF6 0.46 Psyr_2491 glycogen branching enzyme low > 86
Erwinia amylovora T8 0.31 OLJFJH_11220 EamA family transporter 0.44 OLJFJH_04260 1 4-alpha-glucan branching enzyme low > 58
Pseudomonas sp. DMC3 0.31 GFF3269 hypothetical protein 0.45 GFF3495 1,4-alpha-glucan branching enzyme GlgB low > 89
Pseudomonas orientalis W4I3 0.29 QF045_RS05790 DMT family transporter 0.45 QF045_RS17045 1,4-alpha-glucan branching protein GlgB low > 93
Pseudomonas simiae WCS417 0.27 PS417_02755 membrane protein 0.45 PS417_12805 glycogen branching protein low > 88
Pseudomonas fluorescens SBW25 0.27 PFLU_RS02815 DMT family transporter 0.45 PFLU_RS13485 1,4-alpha-glucan branching protein GlgB low > 109
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS02815 DMT family transporter 0.45 PFLU_RS13485 1,4-alpha-glucan branching protein GlgB low > 109
Rhizobium sp. OAE497 0.23 ABIE40_RS14810 DMT family transporter 0.45 ABIE40_RS30590 1,4-alpha-glucan branching protein GlgB low > 107
Sinorhizobium meliloti 1021 0.22 SMc00642 hypothetical protein 0.43 SMc03922 glycogen branching protein low > 103
Rhodopseudomonas palustris CGA009 0.21 TX73_022275 DMT family transporter 0.44 TX73_018885 1,4-alpha-glucan branching protein GlgB
Pseudomonas sp. S08-1 0.21 OH686_08025 Permease of the drug/metabolite transporter (DMT) superfamily 0.45 OH686_01540 1,4-alpha-glucan branching enzyme low > 80
Xanthobacter sp. DMC5 0.21 GFF1826 hypothetical protein 0.44 GFF1455 1,4-alpha-glucan branching enzyme GlgB
Desulfovibrio vulgaris Hildenborough JW710 0.20 DVU0947 membrane protein, putative (TIGR) 0.39 DVU2243 glgB 1,4-alpha-glucan branching enzyme (TIGR) low > 55
Pseudomonas stutzeri RCH2 0.20 Psest_1063 Predicted permease, DMT superfamily 0.45 Psest_2158 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase low > 67
Azospirillum sp. SherDot2 0.19 MPMX19_00219 hypothetical protein 0.46 MPMX19_03849 1,4-alpha-glucan branching enzyme GlgB
Rhodospirillum rubrum S1H 0.19 Rru_A2900 Protein of unknown function DUF6, transmembrane (NCBI) 0.45 Rru_A2576 1,4-alpha-glucan branching enzyme (NCBI)
Marinobacter adhaerens HP15 0.19 HP15_3570 membrane protein containing DUF6, transmembrane 0.39 HP15_1712 glycogen branching enzyme low > 73
Variovorax sp. OAS795 0.18 ABID97_RS22665 DMT family transporter 0.43 ABID97_RS04550 1,4-alpha-glucan branching protein GlgB low > 91
Azospirillum brasilense Sp245 0.18 AZOBR_RS02730 multidrug DMT transporter permease 0.45 AZOBR_RS09455 glycogen branching protein low > 97
Desulfovibrio vulgaris Miyazaki F 0.18 DvMF_1359 protein of unknown function DUF6 transmembrane (RefSeq) 0.39 DvMF_0840 glycogen branching enzyme (RefSeq) low > 51
Bosea sp. OAE506 0.18 ABIE41_RS08635 DMT family transporter 0.44 ABIE41_RS01220 1,4-alpha-glucan branching protein GlgB low > 77
Klebsiella michiganensis M5al 0.13 BWI76_RS10350 EamA family transporter 0.44 BWI76_RS26215 glycogen-branching enzyme low > 92
Klebsiella pneumoniae MKP103 0.13 KDGMDA_22215 EamA/RhaT family transporter 0.44 KDGMDA_07100 1 4-alpha-glucan branching enzyme low > 95
Methylophilus sp. DMC18 0.11 GFF2591 hypothetical protein 0.41 GFF1244 1,4-alpha-glucan branching enzyme GlgB low > 43
Paraburkholderia sabiae LMG 24235 0.10 QEN71_RS34925 DMT family transporter 0.45 QEN71_RS17730 1,4-alpha-glucan branching protein GlgB low > 153
Pseudomonas fluorescens FW300-N2C3 0.10 AO356_22840 multidrug transporter 0.46 AO356_01245 glycogen branching protein low > 104
Mucilaginibacter yixingensis YX-36 DSM 26809 0.10 ABZR88_RS16045 DMT family transporter 0.39 ABZR88_RS12490 1,4-alpha-glucan branching protein GlgB low > 71
Shewanella loihica PV-4 0.10 Shew_0694 hypothetical protein (RefSeq) 0.43 Shew_1168 glycogen branching enzyme (RefSeq) low > 60
Pseudomonas sp. RS175 0.10 PFR28_02476 putative amino-acid metabolite efflux pump 0.47 PFR28_01319 1,4-alpha-glucan branching enzyme GlgB low > 88
Pseudomonas fluorescens FW300-N2E2 0.10 Pf6N2E2_455 Permease of the drug/metabolite transporter (DMT) superfamily 0.46 Pf6N2E2_2117 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) low > 103
Magnetospirillum magneticum AMB-1 0.09 AMB_RS04225 EamA/RhaT family transporter 0.44 AMB_RS15430 1,4-alpha-glucan branching protein GlgB
Synechococcus elongatus PCC 7942 0.09 Synpcc7942_1024 hypothetical protein 0.43 Synpcc7942_1085 glgB glycogen branching enzyme low > 38
Burkholderia phytofirmans PsJN 0.09 BPHYT_RS06995 multidrug DMT transporter permease 0.45 BPHYT_RS33780 glycogen branching protein low > 109

Not shown: 17 genomes with orthologs for CSW01_18820 only; 31 genomes with orthologs for CSW01_14125 only