Conservation of cofitness between CSW01_08135 and CSW01_13635 in Vibrio cholerae E7946 ATCC 55056

67 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08135 MFS transporter 1.0 CSW01_13635 thiol:disulfide interchange protein DsbD 0.67 7
Shewanella loihica PV-4 0.27 Shew_1441 major facilitator transporter (RefSeq) 0.42 Shew_3266 dipZ thiol:disulfide interchange protein precursor (RefSeq) low > 60
Shewanella oneidensis MR-1 0.26 SO1917 multidrug resistance protein, putative (NCBI ptt file) 0.44 SO0696 dsbD thiol:disulfide interchange protein DsbD (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.25 Shewana3_1692 Xaa-His dipeptidase (RefSeq) 0.43 Shewana3_3576 dipZ thiol:disulfide interchange protein precursor (RefSeq) low > 73
Pseudomonas aeruginosa MRSN321 0.24 DY961_RS10970 MFS transporter 0.24 DY961_RS05265 protein-disulfide reductase DsbD low > 100
Pseudomonas aeruginosa PA14 0.24 IKLFDK_28385 MFS transporter 0.24 IKLFDK_12170 Thiol:disulfide interchange protein DsbD 2 low > 98
Dechlorosoma suillum PS 0.24 Dsui_2798 arabinose efflux permease family protein 0.31 Dsui_0718 thiol:disulfide interchange protein — —
Pseudomonas aeruginosa PUPa3 0.24 DQ20_RS51105 MFS transporter 0.24 DQ20_RS55390 protein-disulfide reductase DsbD low > 101
Serratia liquefaciens MT49 0.24 IAI46_11675 MFS transporter 0.45 IAI46_01465 protein-disulfide reductase DsbD low > 87
Pseudomonas fluorescens FW300-N2C3 0.24 AO356_09295 hypothetical protein 0.28 AO356_02870 thiol:disulfide interchange protein — —
Pseudomonas fluorescens GW456-L13 0.24 PfGW456L13_256 Permeases of the major facilitator superfamily 0.28 PfGW456L13_2298 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) low > 87
Klebsiella michiganensis M5al 0.24 BWI76_RS15965 MFS transporter 0.47 BWI76_RS02315 protein-disulfide reductase DsbD low > 92
Pseudomonas fluorescens FW300-N2E3 0.24 AO353_12595 hypothetical protein 0.25 AO353_19365 thiol:disulfide interchange protein low > 101
Pseudomonas fluorescens FW300-N2E2 0.24 Pf6N2E2_3736 Permeases of the major facilitator superfamily 0.28 Pf6N2E2_2398 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) — —
Klebsiella pneumoniae MKP103 0.24 KDGMDA_21220 MFS transporter 0.45 KDGMDA_10805 Thiol:disulfide interchange protein DsbD low > 95
Herbaspirillum seropedicae SmR1 0.24 HSERO_RS00235 MFS transporter 0.29 HSERO_RS00715 thiol:disulfide interchange protein — —
Pseudomonas sp. RS175 0.24 PFR28_05018 Inner membrane transport protein YnfM 0.27 PFR28_01029 Thiol:disulfide interchange protein DsbD — —
Pseudomonas fluorescens FW300-N1B4 0.24 Pf1N1B4_1531 Permeases of the major facilitator superfamily 0.27 Pf1N1B4_210 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) low > 87
Pseudomonas sp. BP01 0.23 JOY50_RS09340 MFS transporter 0.26 JOY50_RS23140 protein-disulfide reductase DsbD low > 84
Escherichia coli ECOR27 0.23 NOLOHH_18235 araJ MFS transporter 0.47 NOLOHH_04715 dsbD protein-disulfide reductase DsbD low > 76
Escherichia coli ECOR38 0.23 HEPCGN_06105 ynfM Inner membrane transport protein YnfM 0.46 HEPCGN_10675 dsbD protein-disulfide reductase DsbD low > 88
Escherichia coli BW25113 0.23 b1596 ynfM predicted transporter (NCBI) 0.47 b4136 dipZ thiol:disulfide interchange protein precursor (NCBI) low > 76
Escherichia coli ECRC102 0.23 NIAGMN_00345 ynfM Inner membrane transport protein YnfM 0.47 NIAGMN_10295 dsbD protein-disulfide reductase DsbD low > 80
Escherichia coli ECRC62 0.23 BNILDI_17025 ynfM Inner membrane transport protein YnfM 0.47 BNILDI_06775 dsbD protein-disulfide reductase DsbD low > 75
Escherichia coli ECRC98 0.23 JDDGAC_02320 ynfM Inner membrane transport protein YnfM 0.47 JDDGAC_16085 dsbD protein-disulfide reductase DsbD low > 87
Escherichia coli ECRC101 0.23 MCAODC_17680 ynfM Inner membrane transport protein YnfM 0.46 MCAODC_02960 dsbD protein-disulfide reductase DsbD low > 87
Escherichia coli BL21 0.23 ECD_01565 putative arabinose efflux transporter 0.47 ECD_04006 thiol:disulfide interchange protein and activator of DsbC low > 61
Escherichia coli ECRC100 0.23 OKFHMN_27730 ynfM Inner membrane transport protein YnfM 0.47 OKFHMN_12450 dsbD protein-disulfide reductase DsbD low > 79
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_02130 Inner membrane transport protein YnfM 0.47 OHPLBJKB_03907 Thiol:disulfide interchange protein DsbD low > 74
Escherichia fergusonii Becca 0.23 EFB2_02396 Inner membrane transport protein YnfM 0.47 EFB2_04399 Thiol:disulfide interchange protein DsbD low > 86
Escherichia coli Nissle 1917 0.23 ECOLIN_RS08915 MFS transporter 0.47 ECOLIN_RS24030 protein-disulfide reductase DsbD low > 55
Pseudomonas simiae WCS417 0.23 PS417_02015 membrane protein 0.26 PS417_19525 thiol:disulfide interchange protein — —
Acinetobacter radioresistens SK82 0.23 MPMX26_00126 Inner membrane transport protein YnfM 0.21 MPMX26_03164 Thiol:disulfide interchange protein DsbD — —
Pseudomonas fluorescens SBW25 0.23 PFLU_RS02060 MFS transporter 0.25 PFLU_RS21490 protein-disulfide reductase DsbD — —
Escherichia coli ECRC99 0.23 KEDOAH_00375 araJ MFS transporter 0.47 KEDOAH_15715 dsbD protein-disulfide reductase DsbD — —
Pseudomonas putida KT2440 0.23 PP_5072 efflux transporter 0.25 PP_0561 thiol/disulfide interchange protein 1 low > 96
Pseudomonas fluorescens SBW25-INTG 0.23 PFLU_RS02060 MFS transporter 0.25 PFLU_RS21490 protein-disulfide reductase DsbD — —
Pectobacterium carotovorum WPP14 0.23 HER17_RS10745 MFS transporter 0.47 HER17_RS18850 protein-disulfide reductase DsbD 0.45 45
Enterobacter sp. TBS_079 0.23 MPMX20_02061 Inner membrane transport protein YnfM 0.45 MPMX20_00416 Thiol:disulfide interchange protein DsbD low > 85
Rahnella sp. WP5 0.23 EX31_RS16995 MFS transporter 0.46 EX31_RS08975 protein-disulfide reductase DsbD low > 89
Paraburkholderia sabiae LMG 24235 0.23 QEN71_RS32385 MFS transporter 0.23 QEN71_RS28120 protein-disulfide reductase DsbD — —
Pseudomonas orientalis W4I3 0.23 QF045_RS05075 MFS transporter 0.26 QF045_RS21665 protein-disulfide reductase DsbD — —
Pseudomonas sp. DMC3 0.23 GFF3107 Inner membrane transport protein YnfM 0.29 GFF4549 Thiol:disulfide interchange protein DsbD — —
Pseudomonas sp. SVBP6 0.23 COO64_RS13105 MFS transporter 0.24 COO64_RS18765 dsbD protein-disulfide reductase DsbD low > 93
Pantoea agglomerans CFBP13505 P0401 0.22 PagCFBP13505_RS06415 MFS transporter 0.44 PagCFBP13505_RS09505 protein-disulfide reductase DsbD low > 74
Pseudomonas lactucae CFBP13502 0.22 GEMAOFIL_00635 Inner membrane transport protein YnfM 0.25 GEMAOFIL_04105 Thiol:disulfide interchange protein DsbD — —
Paraburkholderia graminis OAS925 0.22 ABIE53_000436 YNFM family putative membrane transporter 0.26 ABIE53_000167 thiol:disulfide interchange protein DsbD low > 113
Pseudomonas syringae pv. syringae B728a 0.22 Psyr_0420 General substrate transporter:Major facilitator superfamily 0.24 Psyr_4398 Protein-disulfide reductase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.22 Psyr_0420 General substrate transporter:Major facilitator superfamily 0.24 Psyr_4398 Protein-disulfide reductase — —
Pantoea sp. MT58 0.22 IAI47_09740 MFS transporter 0.43 IAI47_17335 protein-disulfide reductase DsbD low > 76
Enterobacter asburiae PDN3 0.22 EX28DRAFT_1495 Arabinose efflux permease 0.46 EX28DRAFT_3333 Thiol:disulfide interchange protein low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.21 GFF1787 Permeases of the major facilitator superfamily 0.46 GFF2016 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) low > 78
Paraburkholderia bryophila 376MFSha3.1 0.21 H281DRAFT_02192 MFS transporter, YNFM family, putative membrane transport protein 0.23 H281DRAFT_05598 thiol:disulfide interchange protein DsbD — —
Pseudomonas stutzeri RCH2 0.21 Psest_3708 Arabinose efflux permease 0.27 Psest_1603 Thiol:disulfide interchange protein low > 67
Erwinia amylovora T8 0.21 OLJFJH_14285 MFS transporter 0.42 OLJFJH_02625 protein-disulfide reductase DsbD low > 58
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS01705 MFS transporter 0.23 BPHYT_RS17970 thiol:disulfide interchange protein — —
Shewanella amazonensis SB2B 0.20 Sama_2214 multidrug resistance protein, putative (RefSeq) 0.42 Sama_0538 dipZ thiol:disulfide interchange protein precursor (RefSeq) low > 62
Dickeya dadantii 3937 0.20 DDA3937_RS10665 MFS transporter 0.43 DDA3937_RS02705 protein-disulfide reductase DsbD low > 74
Dickeya dianthicola 67-19 0.20 HGI48_RS10665 MFS transporter 0.42 HGI48_RS02680 protein-disulfide reductase DsbD low > 71
Acinetobacter baumannii LAC-4 0.19 RR41_RS01155 MFS transporter 0.24 RR41_RS00770 protein-disulfide reductase DsbD low > 55
Dickeya dianthicola ME23 0.19 DZA65_RS11135 MFS transporter 0.42 DZA65_RS02835 protein-disulfide reductase DsbD low > 75
Ralstonia solanacearum UW163 0.18 UW163_RS06140 MFS transporter 0.27 UW163_RS06570 protein-disulfide reductase DsbD — —
Ralstonia solanacearum IBSBF1503 0.18 RALBFv3_RS07480 MFS transporter 0.27 RALBFv3_RS07045 protein-disulfide reductase DsbD low > 76
Pseudomonas segetis P6 0.18 MPMX49_01797 Inner membrane transport protein YnfM 0.26 MPMX49_04100 Thiol:disulfide interchange protein DsbD — —
Ralstonia solanacearum GMI1000 0.17 RS_RS15415 MFS transporter 0.27 RS_RS14985 thiol:disulfide interchange protein DsbD — —
Ralstonia solanacearum PSI07 0.17 RPSI07_RS09770 MFS transporter 0.28 RPSI07_RS10195 protein-disulfide reductase DsbD low > 81
Ralstonia sp. UNC404CL21Col 0.16 ABZR87_RS03160 MFS transporter 0.28 ABZR87_RS02695 protein-disulfide reductase DsbD — —
Castellaniella sp019104865 MT123 0.13 ABCV34_RS01130 MFS transporter 0.27 ABCV34_RS03205 protein-disulfide reductase DsbD low > 48

Not shown: 16 genomes with orthologs for CSW01_08135 only; 9 genomes with orthologs for CSW01_13635 only