Conservation of cofitness between CSW01_10480 and CSW01_13550 in Vibrio cholerae E7946 ATCC 55056

73 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10480 histidine kinase 1.0 CSW01_13550 O-succinylhomoserine (thiol)-lyase 0.47 18
Enterobacter sp. TBS_079 0.48 MPMX20_01332 Esterase YbfF 0.59 MPMX20_04531 Cystathionine gamma-synthase low > 85
Pectobacterium carotovorum WPP14 0.48 HER17_RS15070 esterase 0.60 HER17_RS00910 cystathionine gamma-synthase low > 75
Enterobacter asburiae PDN3 0.47 EX28DRAFT_2289 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 0.59 EX28DRAFT_4411 cystathionine gamma-synthase (EC 2.5.1.48) low > 76
Escherichia fergusonii Becca 0.45 EFB2_03408 Esterase YbfF 0.59 EFB2_04679 Cystathionine gamma-synthase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_03029 Esterase YbfF 0.59 OHPLBJKB_04111 Cystathionine gamma-synthase low > 74
Escherichia coli Nissle 1917 0.45 ECOLIN_RS03720 esterase 0.59 ECOLIN_RS22725 cystathionine gamma-synthase low > 55
Escherichia coli BL21 0.45 ECD_00643 acyl-CoA esterase 0.59 ECD_03825 cystathionine gamma-synthase, PLP-dependent low > 61
Pantoea agglomerans CFBP13505 P0401 0.45 PagCFBP13505_RS03460 esterase 0.56 PagCFBP13505_RS18460 cystathionine gamma-synthase low > 74
Pantoea sp. MT58 0.45 IAI47_13845 esterase 0.55 IAI47_00880 cystathionine gamma-synthase low > 76
Escherichia coli ECRC62 0.45 BNILDI_21495 ybfF esterase 0.59 BNILDI_05715 metB cystathionine gamma-synthase low > 75
Escherichia coli BW25113 0.45 b0686 ybfF hypothetical protein (NCBI) 0.59 b3939 metB cystathionine gamma-synthase (NCBI) low > 76
Escherichia coli ECOR27 0.45 NOLOHH_23490 ybfF esterase 0.59 NOLOHH_05820 metB cystathionine gamma-synthase low > 76
Klebsiella michiganensis M5al 0.45 BWI76_RS08280 acyl-CoA esterase 0.58 BWI76_RS00785 cystathionine gamma-synthase low > 92
Escherichia coli ECOR38 0.45 HEPCGN_01115 ybfF esterase 0.59 HEPCGN_12345 metB cystathionine gamma-synthase low > 88
Rahnella sp. WP5 0.45 EX31_RS23310 esterase 0.56 EX31_RS14215 cystathionine gamma-synthase low > 89
Klebsiella pneumoniae MKP103 0.44 KDGMDA_16605 esterase 0.59 KDGMDA_09295 cystathionine gamma-synthase low > 95
Escherichia coli ECRC98 0.44 JDDGAC_10760 ybfF esterase 0.59 JDDGAC_17300 metB cystathionine gamma-synthase low > 87
Escherichia coli ECRC102 0.44 NIAGMN_05165 ybfF esterase 0.59 NIAGMN_11430 metB cystathionine gamma-synthase low > 80
Escherichia coli ECRC101 0.44 MCAODC_26325 ybfF esterase 0.59 MCAODC_04175 metB cystathionine gamma-synthase low > 87
Escherichia coli ECRC100 0.44 OKFHMN_07110 ybfF esterase 0.59 OKFHMN_13675 metB cystathionine gamma-synthase low > 79
Escherichia coli ECRC99 0.44 KEDOAH_20860 ybfF esterase 0.59 KEDOAH_14485 metB cystathionine gamma-synthase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.44 GFF4599 Esterase ybfF (EC 3.1.-.-) 0.59 GFF2323 Cystathionine gamma-synthase (EC 2.5.1.48) low > 78
Erwinia tracheiphila SCR3 0.44 LU632_RS16180 ybfF esterase 0.57 LU632_RS19640 metB cystathionine gamma-synthase low > 73
Dickeya dianthicola 67-19 0.43 HGI48_RS06390 esterase 0.58 HGI48_RS20425 cystathionine gamma-synthase low > 71
Dickeya dianthicola ME23 0.43 DZA65_RS06735 esterase 0.58 DZA65_RS21470 cystathionine gamma-synthase low > 75
Dickeya dadantii 3937 0.43 DDA3937_RS06345 esterase 0.59 DDA3937_RS00950 cystathionine gamma-synthase low > 74
Erwinia amylovora T8 0.43 OLJFJH_17045 esterase 0.54 OLJFJH_06095 cystathionine gamma-synthase low > 58
Erwinia tracheiphila HP pepo 2.2 0.43 IJEDHG_02235 alpha/beta hydrolase 0.57 IJEDHG_13020 metB cystathionine gamma-synthase low > 61
Serratia liquefaciens MT49 0.42 IAI46_06135 esterase 0.59 IAI46_24540 cystathionine gamma-synthase low > 87
Acinetobacter radioresistens SK82 0.39 MPMX26_01706 Esterase YbfF 0.32 MPMX26_01645 O-succinylhomoserine sulfhydrylase low > 36
Shewanella loihica PV-4 0.38 Shew_1920 alpha/beta hydrolase fold (RefSeq) 0.56 Shew_0520 O-succinylhomoserine (thiol)-lyase (RefSeq) low > 60
Shewanella sp. ANA-3 0.37 Shewana3_2136 alpha/beta hydrolase fold (RefSeq) 0.59 Shewana3_3614 cystathionine gamma-synthase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.37 Sama_1704 alpha/beta fold family hydrolase (RefSeq) 0.59 Sama_3171 cystathionine gamma-synthase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.36 MIT1002_02290 Esterase YbfF 0.19 MIT1002_02266 Methionine gamma-lyase low > 70
Shewanella oneidensis MR-1 0.36 SO2333 hydrolase, alpha/beta fold family (NCBI ptt file) 0.57 SO4056 metB cystathionine gamma-synthase (NCBI ptt file) low > 76
Marinobacter adhaerens HP15 0.36 HP15_260 hydrolase, alpha/beta fold family protein 0.27 HP15_1820 methionine gamma-lyase low > 73
Pontibacter actiniarum KMM 6156, DSM 19842 0.35 CA264_15290 alpha/beta hydrolase 0.37 CA264_20315 cystathionine gamma-synthase low > 74
Methylophilus sp. DMC18 0.34 GFF1891 Esterase YbfF 0.28 GFF412 O-acetyl-L-homoserine sulfhydrylase low > 43
Echinicola vietnamensis KMM 6221, DSM 17526 0.34 Echvi_0662 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) 0.36 Echvi_2080 Cystathionine beta-lyases/cystathionine gamma-synthases 0.23 73
Azospirillum brasilense Sp245 0.33 AZOBR_RS07620 esterase 0.27 AZOBR_RS11340 O-acetylhomoserine aminocarboxypropyltransferase low > 97
Azospirillum sp. SherDot2 0.32 MPMX19_03973 Esterase YbfF 0.32 MPMX19_06514 L-methionine gamma-lyase low > 112
Rhodospirillum rubrum S1H 0.30 Rru_A2707 Alpha/beta hydrolase fold (NCBI) 0.35 Rru_A0786 Cystathionine gamma-synthase (NCBI) low > 58
Magnetospirillum magneticum AMB-1 0.30 AMB_RS17400 esterase 0.27 AMB_RS21365 O-succinylhomoserine sulfhydrylase — —
Cellulophaga baltica 18 0.29 M666_RS07985 alpha/beta fold hydrolase 0.39 M666_RS03785 cystathionine gamma-synthase low > 67
Variovorax sp. OAS795 0.28 ABID97_RS26545 alpha/beta fold hydrolase 0.27 ABID97_RS21630 O-succinylhomoserine sulfhydrylase — —
Phaeobacter inhibens DSM 17395 0.28 PGA1_c11820 putative esterase 0.32 PGA1_c16600 methionine gamma-lyase MdeA low > 62
Dinoroseobacter shibae DFL-12 0.28 Dshi_0820 alpha/beta hydrolase fold (RefSeq) 0.26 Dshi_1002 Cystathionine gamma-synthase (RefSeq) low > 64
Rhodopseudomonas palustris CGA009 0.17 TX73_005125 alpha/beta hydrolase 0.30 TX73_012185 PLP-dependent aspartate aminotransferase family protein low > 86
Herbaspirillum seropedicae SmR1 0.16 HSERO_RS19710 hydrolase 0.22 HSERO_RS18310 O-acetylhomoserine aminocarboxypropyltransferase low > 78
Sphingobium sp. HT1-2 0.15 GFF1753 Hydrolase, alpha/beta fold family 0.27 GFF3455 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) @ O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) low > 95
Pseudomonas sp. SVBP6 0.15 COO64_RS21960 alpha/beta fold hydrolase 0.37 COO64_RS14890 cystathionine gamma-synthase low > 93
Pseudomonas sp. S08-1 0.15 OH686_05455 Beta-ketoadipate enol-lactone hydrolase 0.31 OH686_04415 O-succinylhomoserine sulfhydrylase low > 80
Pseudomonas lactucae CFBP13502 0.15 GEMAOFIL_02001 2-(acetamidomethylene)succinate hydrolase 0.37 GEMAOFIL_02861 Cystathionine beta-lyase low > 96
Pseudomonas sp. RS175 0.14 PFR28_02852 Haloacetate dehalogenase H-1 0.30 PFR28_02810 O-succinylhomoserine sulfhydrylase low > 88
Pseudomonas fluorescens FW300-N1B4 0.14 Pf1N1B4_111 Possible oxidoreductase 0.38 Pf1N1B4_4890 Cystathionine gamma-lyase (EC 4.4.1.1) low > 87
Pseudomonas fluorescens SBW25-INTG 0.14 PFLU_RS14970 alpha/beta hydrolase 0.36 PFLU_RS16625 cystathionine gamma-synthase low > 109
Pseudomonas fluorescens SBW25 0.14 PFLU_RS14970 alpha/beta hydrolase 0.36 PFLU_RS16625 cystathionine gamma-synthase low > 109
Pseudomonas orientalis W4I3 0.14 QF045_RS19825 alpha/beta hydrolase 0.36 QF045_RS15175 cystathionine gamma-synthase low > 93
Pseudomonas fluorescens FW300-N2E2 0.14 Pf6N2E2_36 Possible oxidoreductase 0.30 Pf6N2E2_77 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) low > 103
Pseudomonas fluorescens FW300-N2E3 0.14 AO353_29180 alpha/beta hydrolase 0.38 AO353_23295 cystathionine beta-lyase low > 101
Pseudomonas fluorescens GW456-L13 0.12 PfGW456L13_2446 Possible oxidoreductase 0.30 PfGW456L13_3934 O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) low > 87
Lysobacter sp. OAE881 0.12 ABIE51_RS11910 alpha/beta hydrolase 0.52 ABIE51_RS16185 O-succinylhomoserine (thiol)-lyase low > 62
Dechlorosoma suillum PS 0.12 Dsui_2820 putative hydrolase or acyltransferase of alpha/beta superfamily 0.35 Dsui_2042 cystathionine beta-lyase/cystathionine gamma-synthase low > 51
Bosea sp. OAE506 0.12 ABIE41_RS09840 alpha/beta fold hydrolase BchO 0.27 ABIE41_RS19270 O-acetylhomoserine aminocarboxypropyltransferase low > 77
Cupriavidus basilensis FW507-4G11 0.12 RR42_RS21635 alpha/beta hydrolase 0.26 RR42_RS06465 O-acetylhomoserine aminocarboxypropyltransferase low > 128
Ralstonia solanacearum PSI07 0.12 RPSI07_RS15675 alpha/beta hydrolase 0.25 RPSI07_RS15620 O-acetylhomoserine aminocarboxypropyltransferase low > 81
Pseudomonas aeruginosa PA14 0.12 IKLFDK_03640 alpha/beta hydrolase 0.37 IKLFDK_23420 cystathionine gamma-synthase low > 98
Pseudomonas aeruginosa PUPa3 0.12 DQ20_RS44475 alpha/beta hydrolase 0.37 DQ20_RS37320 cystathionine gamma-synthase low > 101
Pseudomonas aeruginosa MRSN321 0.12 DY961_RS08350 alpha/beta hydrolase 0.37 DY961_RS21980 cystathionine gamma-synthase low > 100
Ralstonia solanacearum IBSBF1503 0.11 RALBFv3_RS01815 alpha/beta hydrolase 0.25 RALBFv3_RS01870 O-acetylhomoserine aminocarboxypropyltransferase low > 76
Ralstonia solanacearum UW163 0.11 UW163_RS15125 alpha/beta hydrolase 0.25 UW163_RS15180 O-acetylhomoserine aminocarboxypropyltransferase — —
Xanthobacter sp. DMC5 0.11 GFF1431 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase 0.25 GFF697 O-acetyl-L-homoserine sulfhydrylase — —
Dyella japonica UNC79MFTsu3.2 0.11 ABZR86_RS07830 alpha/beta hydrolase 0.54 ABZR86_RS19030 cystathionine gamma-synthase low > 74

Not shown: 0 genomes with orthologs for CSW01_10480 only; 45 genomes with orthologs for CSW01_13550 only