Conservation of cofitness between CSW01_06960 and CSW01_11370 in Vibrio cholerae E7946 ATCC 55056

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06960 molecular chaperone 1.0 CSW01_11370 acyl-CoA dehydrogenase 0.51 5
Serratia liquefaciens MT49 0.55 IAI46_18955 molecular chaperone 0.68 IAI46_04335 acyl-CoA dehydrogenase low > 87
Escherichia coli BL21 0.54 ECD_01975 Hsp70 chaperone family protein 0.69 ECD_00216 acyl coenzyme A dehydrogenase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_01636 Chaperone protein DnaK 0.69 OHPLBJKB_03418 Acyl-coenzyme A dehydrogenase low > 74
Escherichia coli ECOR27 0.54 NOLOHH_15595 yegD molecular chaperone 0.69 NOLOHH_02155 fadE acyl-CoA dehydrogenase FadE low > 76
Escherichia coli BW25113 0.54 b2069 yegD putative heat shock protein (VIMSS) 0.69 b0221 yafH putative acyl-CoA dehydrogenase (EC 1.3.99.-) (VIMSS) low > 76
Escherichia coli Nissle 1917 0.54 ECOLIN_RS12175 molecular chaperone 0.68 ECOLIN_RS01745 acyl-CoA dehydrogenase FadE low > 55
Escherichia coli ECRC62 0.54 BNILDI_14500 yegD molecular chaperone 0.69 BNILDI_00350 fadE acyl-CoA dehydrogenase FadE low > 75
Pantoea sp. MT58 0.54 IAI47_06890 molecular chaperone 0.67 IAI47_15195 acyl-CoA dehydrogenase low > 76
Pantoea agglomerans CFBP13505 P0401 0.54 PagCFBP13505_RS01000 molecular chaperone 0.67 PagCFBP13505_RS09970 acyl-CoA dehydrogenase low > 74
Klebsiella michiganensis M5al 0.54 BWI76_RS19135 molecular chaperone 0.68 BWI76_RS05470 acyl-CoA dehydrogenase low > 92
Escherichia fergusonii Becca 0.54 EFB2_01785 Chaperone protein DnaK 0.69 EFB2_03796 Acyl-coenzyme A dehydrogenase low > 86
Enterobacter asburiae PDN3 0.54 EX28DRAFT_0485 Molecular chaperone 0.67 EX28DRAFT_2668 Acyl-CoA dehydrogenases low > 76
Escherichia coli ECOR38 0.54 HEPCGN_02955 yegD molecular chaperone 0.69 HEPCGN_07885 fadE acyl-CoA dehydrogenase FadE low > 88
Enterobacter sp. TBS_079 0.54 MPMX20_03051 Chaperone protein DnaK 0.67 MPMX20_00910 Acyl-coenzyme A dehydrogenase low > 85
Klebsiella pneumoniae MKP103 0.54 KDGMDA_26270 molecular chaperone 0.68 KDGMDA_13730 acyl-CoA dehydrogenase FadE low > 95
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF3857 Putative heat shock protein YegD 0.68 GFF4100 Butyryl-CoA dehydrogenase (EC 1.3.99.2) low > 78
Rahnella sp. WP5 0.53 EX31_RS20290 molecular chaperone 0.68 EX31_RS21025 acyl-CoA dehydrogenase low > 89
Erwinia amylovora T8 0.53 OLJFJH_11985 molecular chaperone 0.67 OLJFJH_18460 acyl-CoA dehydrogenase FadE low > 58
Pectobacterium carotovorum WPP14 0.52 HER17_RS08760 molecular chaperone 0.67 HER17_RS04640 acyl-CoA dehydrogenase FadE low > 75
Dickeya dianthicola 67-19 0.52 HGI48_RS13075 molecular chaperone 0.66 HGI48_RS16665 acyl-CoA dehydrogenase FadE low > 71
Dickeya dianthicola ME23 0.52 DZA65_RS13540 molecular chaperone 0.66 DZA65_RS17755 acyl-CoA dehydrogenase low > 75
Dickeya dadantii 3937 0.52 DDA3937_RS13010 molecular chaperone 0.67 DDA3937_RS16595 acyl-CoA dehydrogenase FadE low > 74
Escherichia coli ECRC98 0.50 JDDGAC_28360 yegD molecular chaperone 0.68 JDDGAC_13405 fadE acyl-CoA dehydrogenase FadE low > 87
Escherichia coli ECRC101 0.50 MCAODC_20690 yegD molecular chaperone 0.68 MCAODC_00300 fadE acyl-CoA dehydrogenase FadE low > 87
Escherichia coli ECRC100 0.50 OKFHMN_24250 yegD molecular chaperone 0.68 OKFHMN_09780 fadE acyl-CoA dehydrogenase FadE low > 79
Escherichia coli ECRC99 0.50 KEDOAH_03900 yegD molecular chaperone 0.68 KEDOAH_18375 fadE acyl-CoA dehydrogenase FadE — —
Escherichia coli ECRC102 0.50 NIAGMN_22195 yegD molecular chaperone 0.68 NIAGMN_07640 fadE acyl-CoA dehydrogenase FadE low > 80
Shewanella oneidensis MR-1 0.43 SO2189 hypothetical heat shock protein (NCBI ptt file) 0.67 SO2536 oxidoreductase, acyl-CoA dehydrogenase family (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.43 Shew_1787 putative chaperone (RefSeq) 0.66 Shew_2108 fadE acyl-CoA dehydrogenase (RefSeq) low > 60
Shewanella sp. ANA-3 0.43 Shewana3_2416 putative chaperone (RefSeq) 0.67 Shewana3_2323 fadE acyl-CoA dehydrogenase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.36 Sama_2010 putative chaperone (RefSeq) 0.66 Sama_1870 fadE acyl-CoA dehydrogenase (RefSeq) low > 62
Pseudomonas sp. SVBP6 0.22 COO64_RS18130 Hsp70 family protein 0.47 COO64_RS05915 acyl-CoA dehydrogenase low > 93
Pseudomonas orientalis W4I3 0.21 QF045_RS05810 Hsp70 family protein 0.48 QF045_RS11860 acyl-CoA dehydrogenase low > 93
Pseudomonas syringae pv. syringae B728a ΔmexB 0.21 Psyr_4441 heat shock protein YegD 0.50 Psyr_1628 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, N-terminal low > 86
Pseudomonas syringae pv. syringae B728a 0.21 Psyr_4441 heat shock protein YegD 0.50 Psyr_1628 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, N-terminal low > 86
Pseudomonas fluorescens SBW25 0.21 PFLU_RS02835 Hsp70 family protein 0.48 PFLU_RS09195 acyl-CoA dehydrogenase 0.57 3
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS02835 Hsp70 family protein 0.48 PFLU_RS09195 acyl-CoA dehydrogenase low > 109
Pseudomonas fluorescens FW300-N2E3 0.21 AO353_13470 heat-shock protein 0.49 AO353_01500 acyl-CoA dehydrogenase low > 101
Pseudomonas lactucae CFBP13502 0.21 GEMAOFIL_00789 Chaperone protein DnaK 0.47 GEMAOFIL_01960 Acyl-coenzyme A dehydrogenase low > 96
Pseudomonas simiae WCS417 0.21 PS417_02775 heat-shock protein 0.48 PS417_09185 acyl-CoA dehydrogenase low > 88
Pseudomonas fluorescens FW300-N1B4 0.21 Pf1N1B4_1359 Putative heat shock protein YegD 0.46 Pf1N1B4_480 Butyryl-CoA dehydrogenase (EC 1.3.99.2) low > 87
Pseudomonas sp. DMC3 0.21 GFF3273 Chaperone protein DnaK 0.49 GFF4784 Acyl-coenzyme A dehydrogenase low > 89
Dechlorosoma suillum PS 0.21 Dsui_2742 molecular chaperone 0.53 Dsui_0326 acyl-CoA dehydrogenase low > 51
Pseudomonas fluorescens FW300-N2C3 0.20 AO356_08410 heat-shock protein 0.46 AO356_20030 acyl-CoA dehydrogenase low > 104
Pseudomonas fluorescens GW456-L13 0.20 PfGW456L13_96 Putative heat shock protein YegD 0.49 PfGW456L13_2077 Butyryl-CoA dehydrogenase (EC 1.3.99.2) low > 87
Ralstonia solanacearum UW163 0.20 UW163_RS01135 Hsp70 family protein 0.48 UW163_RS01725 acyl-CoA dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.20 RALBFv3_RS12435 Hsp70 family protein 0.48 RALBFv3_RS11865 acyl-CoA dehydrogenase low > 76
Pseudomonas fluorescens FW300-N2E2 0.20 Pf6N2E2_3559 Putative heat shock protein YegD 0.47 Pf6N2E2_5924 Butyryl-CoA dehydrogenase (EC 1.3.99.2) low > 103
Ralstonia solanacearum PSI07 0.20 RPSI07_RS20885 Hsp70 family protein 0.49 RPSI07_RS21335 acyl-CoA dehydrogenase low > 81
Pseudomonas sp. RS175 0.20 PFR28_05174 Chaperone protein DnaK 0.47 PFR28_03037 Acyl-coenzyme A dehydrogenase 0.28 9
Ralstonia solanacearum GMI1000 0.20 RS_RS03215 Hsp70 family protein 0.49 RS_RS02685 acyl-CoA dehydrogenase low > 80
Pseudomonas putida KT2440 0.20 PP_4849 putative DnaK protein 0.48 PP_1893 medium-long chain acyl-CoA dehydrogenase low > 96
Pseudomonas sp. BP01 0.19 JOY50_RS17475 Hsp70 family protein 0.48 JOY50_RS16900 acyl-CoA dehydrogenase low > 84
Ralstonia sp. UNC404CL21Col 0.19 ABZR87_RS03710 Hsp70 family protein 0.49 ABZR87_RS07825 acyl-CoA dehydrogenase low > 80
Pseudomonas aeruginosa MRSN321 0.19 DY961_RS10145 Hsp70 family protein 0.49 DY961_RS02975 acyl-CoA dehydrogenase low > 100
Pseudomonas aeruginosa PUPa3 0.19 DQ20_RS51910 Hsp70 family protein 0.49 DQ20_RS32620 acyl-CoA dehydrogenase low > 101
Pseudomonas aeruginosa PA14 0.19 IKLFDK_29185 heat-shock protein 0.49 IKLFDK_14245 acyl-CoA dehydrogenase low > 98
Pseudomonas segetis P6 0.19 MPMX49_04128 Chaperone protein DnaK 0.49 MPMX49_02284 Acyl-coenzyme A dehydrogenase low > 75
Pseudomonas sp. S08-1 0.19 OH686_07790 Uncharacterized chaperone protein YegD 0.46 OH686_22645 Acyl-CoA dehydrogenase low > 80
Burkholderia phytofirmans PsJN 0.18 BPHYT_RS11050 molecular chaperone 0.48 BPHYT_RS08290 acyl-CoA dehydrogenase low > 109
Pseudomonas stutzeri RCH2 0.17 Psest_1325 Molecular chaperone 0.47 Psest_2728 Acyl-CoA dehydrogenases low > 67
Paraburkholderia bryophila 376MFSha3.1 0.16 H281DRAFT_05685 hypothetical chaperone protein 0.48 H281DRAFT_05133 acyl-CoA dehydrogenase low > 103
Herbaspirillum seropedicae SmR1 0.16 HSERO_RS01480 heat-shock protein 0.49 HSERO_RS18135 acyl-CoA dehydrogenase low > 78
Paraburkholderia graminis OAS925 0.16 ABIE53_003670 putative chaperone protein 0.47 ABIE53_002416 acyl-CoA dehydrogenase low > 113
Xanthomonas campestris pv. campestris strain 8004 0.15 Xcc-8004.3631.1 Putative heat shock protein YegD 0.50 Xcc-8004.1577.1 Butyryl-CoA dehydrogenase (EC 1.3.99.2) low > 74
Paraburkholderia sabiae LMG 24235 0.15 QEN71_RS27705 Hsp70 family protein 0.47 QEN71_RS22955 acyl-CoA dehydrogenase low > 153

Not shown: 16 genomes with orthologs for CSW01_06960 only; 11 genomes with orthologs for CSW01_11370 only