Conservation of cofitness between CSW01_11440 and CSW01_10325 in Vibrio cholerae E7946 ATCC 55056

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11440 ribonuclease HII 1.0 CSW01_10325 protein phosphatase CheZ 0.72 2
Enterobacter sp. TBS_079 0.70 MPMX20_00867 Ribonuclease HII 0.24 MPMX20_02785 Protein phosphatase CheZ low > 85
Enterobacter asburiae PDN3 0.69 EX28DRAFT_3771 RNase HII (EC 3.1.26.4) 0.23 EX28DRAFT_0675 Chemotaxis protein low > 76
Escherichia coli ECOR27 0.68 NOLOHH_02485 rnhB ribonuclease HII 0.23 NOLOHH_16600 cheZ protein phosphatase CheZ low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_03480 Ribonuclease HII 0.23 OHPLBJKB_01847 Protein phosphatase CheZ low > 74
Escherichia coli BW25113 0.68 b0183 rnhB ribonuclease HII (NCBI) 0.23 b1881 cheZ chemotaxis regulator, protein phosphatase for CheY (NCBI) low > 76
Escherichia coli ECRC62 0.68 BNILDI_09185 rnhB ribonuclease HII 0.23 BNILDI_15390 cheZ protein phosphatase CheZ low > 75
Escherichia coli ECRC100 0.67 OKFHMN_10140 rnhB ribonuclease HII 0.23 OKFHMN_26160 cheZ protein phosphatase CheZ low > 79
Escherichia coli ECRC98 0.67 JDDGAC_13735 rnhB ribonuclease HII 0.23 JDDGAC_00735 cheZ protein phosphatase CheZ low > 87
Escherichia coli ECRC101 0.67 MCAODC_00655 rnhB ribonuclease HII 0.23 MCAODC_19245 cheZ protein phosphatase CheZ low > 88
Escherichia coli ECRC99 0.67 KEDOAH_18015 rnhB ribonuclease HII 0.23 KEDOAH_01945 cheZ protein phosphatase CheZ — —
Escherichia coli ECOR38 0.67 HEPCGN_08095 rnhB ribonuclease HII 0.23 HEPCGN_04580 cheZ protein phosphatase CheZ low > 88
Escherichia coli ECRC102 0.67 NIAGMN_07990 rnhB ribonuclease HII 0.23 NIAGMN_01900 cheZ protein phosphatase CheZ low > 80
Escherichia fergusonii Becca 0.67 EFB2_03861 Ribonuclease HII 0.23 EFB2_02062 Protein phosphatase CheZ low > 86
Escherichia coli Nissle 1917 0.67 ECOLIN_RS00995 ribonuclease HII 0.23 ECOLIN_RS10745 protein phosphatase CheZ — —
Dickeya dadantii 3937 0.66 DDA3937_RS05185 ribonuclease HII 0.25 DDA3937_RS13515 protein phosphatase CheZ low > 74
Dickeya dianthicola 67-19 0.66 HGI48_RS05185 ribonuclease HII 0.25 HGI48_RS13560 protein phosphatase CheZ — —
Escherichia coli BL21 0.66 ECD_00181 ribonuclease HII 0.23 ECD_01852 chemotaxis regulator, protein phosphatase for CheY low > 61
Dickeya dianthicola ME23 0.66 DZA65_RS05525 ribonuclease HII 0.25 DZA65_RS14045 protein phosphatase CheZ — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF39 Ribonuclease HII (EC 3.1.26.4) 0.23 GFF1662 Chemotaxis response - phosphatase CheZ low > 78
Shewanella loihica PV-4 0.65 Shew_2621 ribonuclease H (RefSeq) 0.49 Shew_1385 chemotaxis phosphatase, CheZ (RefSeq) low > 60
Pantoea agglomerans CFBP13505 P0401 0.65 PagCFBP13505_RS13545 ribonuclease HII 0.24 PagCFBP13505_RS02220 protein phosphatase CheZ low > 74
Pectobacterium carotovorum WPP14 0.65 HER17_RS16265 ribonuclease HII 0.22 HER17_RS08130 protein phosphatase CheZ low > 75
Serratia liquefaciens MT49 0.65 IAI46_20190 ribonuclease HII 0.21 IAI46_16005 protein phosphatase CheZ low > 86
Pantoea sp. MT58 0.65 IAI47_15460 ribonuclease HII 0.24 IAI47_08340 protein phosphatase CheZ 0.39 8
Rahnella sp. WP5 0.65 EX31_RS12965 ribonuclease HII 0.22 EX31_RS11350 protein phosphatase CheZ low > 89
Erwinia amylovora T8 0.64 OLJFJH_00560 ribonuclease HII 0.24 OLJFJH_12770 protein phosphatase CheZ low > 58
Erwinia tracheiphila SCR3 0.63 LU632_RS19895 rnhB ribonuclease HII 0.22 LU632_RS13515 cheZ protein phosphatase CheZ — —
Erwinia tracheiphila HP pepo 2.2 0.62 IJEDHG_15250 rnhB ribonuclease HII 0.22 IJEDHG_22030 cheZ protein phosphatase CheZ low > 61
Shewanella oneidensis MR-1 0.60 SO1643 rnhB ribonuclease HII (NCBI ptt file) 0.48 SO3208 cheZ chemotaxis protein CheZ (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.59 Shewana3_2801 rnhB ribonuclease HII (RefSeq) 0.49 Shewana3_1361 chemotaxis phosphatase, CheZ (RefSeq) — —
Alteromonas macleodii MIT1002 0.59 MIT1002_01017 Ribonuclease HII 0.49 MIT1002_01105 chemotaxis regulator CheZ low > 70
Shewanella amazonensis SB2B 0.58 Sama_1153 rnhB ribonuclease HII (RefSeq) 0.50 Sama_2278 putative chemotaxis phosphatase, CheZ (RefSeq) low > 62
Pseudomonas fluorescens GW456-L13 0.57 PfGW456L13_4694 Ribonuclease HII (EC 3.1.26.4) 0.35 PfGW456L13_4329 Chemotaxis response - phosphatase CheZ — —
Pseudomonas aeruginosa PA14 0.56 IKLFDK_18595 ribonuclease HII 0.33 IKLFDK_06930 protein phosphatase CheZ low > 100
Pseudomonas segetis P6 0.56 MPMX49_03448 Ribonuclease HII 0.32 MPMX49_03125 Protein phosphatase CheZ low > 75
Pseudomonas sp. DMC3 0.56 GFF2067 Ribonuclease HII 0.35 GFF2474 Protein phosphatase CheZ low > 89
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_16530 ribonuclease HII 0.35 AO353_18795 protein phosphatase low > 101
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_3098 Ribonuclease HII (EC 3.1.26.4) 0.34 Pf1N1B4_3628 Chemotaxis response - phosphatase CheZ — —
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_05970 ribonuclease HII 0.34 AO356_03720 protein phosphatase low > 104
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS06345 ribonuclease HII 0.33 PFLU_RS21650 protein phosphatase CheZ low > 109
Pseudomonas fluorescens SBW25 0.55 PFLU_RS06345 ribonuclease HII 0.33 PFLU_RS21650 protein phosphatase CheZ low > 109
Pseudomonas simiae WCS417 0.55 PS417_06280 ribonuclease HII 0.33 PS417_19685 protein phosphatase low > 88
Pseudomonas sp. RS175 0.55 PFR28_00410 Ribonuclease HII 0.35 PFR28_00854 Protein phosphatase CheZ — —
Pseudomonas lactucae CFBP13502 0.55 GEMAOFIL_01426 Ribonuclease HII 0.33 GEMAOFIL_04136 Protein phosphatase CheZ low > 93
Dechlorosoma suillum PS 0.55 Dsui_2680 ribonuclease HII 0.26 Dsui_0952 chemotaxis protein low > 51
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_3055 Ribonuclease HII (EC 3.1.26.4) 0.34 Pf6N2E2_2571 Chemotaxis response - phosphatase CheZ low > 103
Pseudomonas stutzeri RCH2 0.54 Psest_2828 Ribonuclease HII 0.33 Psest_1742 Chemotaxis protein — —
Pseudomonas putida KT2440 0.54 PP_1605 Ribonuclease HII 0.33 PP_4339 Protein phosphatase CheZ low > 96
Pseudomonas sp. S08-1 0.54 OH686_06415 Ribonuclease HII 0.35 OH686_02720 Chemotaxis response - phosphatase CheZ — —
Pseudomonas sp. BP01 0.54 JOY50_RS23670 rnhB ribonuclease HII 0.33 JOY50_RS00575 protein phosphatase CheZ low > 84
Pseudomonas syringae pv. syringae B728a ΔmexB 0.53 Psyr_1357 RNase HII 0.34 Psyr_3435 chemotaxis phosphatase, CheZ low > 86
Pseudomonas syringae pv. syringae B728a 0.53 Psyr_1357 RNase HII 0.34 Psyr_3435 chemotaxis phosphatase, CheZ low > 86
Pseudomonas sp. SVBP6 0.53 COO64_RS19710 rnhB ribonuclease HII 0.34 COO64_RS25635 protein phosphatase CheZ low > 93
Ralstonia solanacearum GMI1000 0.51 RS_RS07115 ribonuclease HII 0.27 RS_RS03740 protein phosphatase CheZ — —
Herbaspirillum seropedicae SmR1 0.50 HSERO_RS10945 ribonuclease HII 0.29 HSERO_RS10135 chemotaxis protein CheZ low > 78
Methylophilus sp. DMC18 0.50 GFF1013 Ribonuclease HII 0.29 GFF751 Protein phosphatase CheZ low > 43
Ralstonia solanacearum PSI07 0.50 RPSI07_RS17030 ribonuclease HII 0.26 RPSI07_RS06220 protein phosphatase CheZ low > 81
Ralstonia solanacearum UW163 0.50 UW163_RS13775 ribonuclease HII 0.25 UW163_RS21725 protein phosphatase CheZ — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.50 GFF4901 Ribonuclease HII (EC 3.1.26.4) 0.21 GFF1434 Chemotaxis response - phosphatase CheZ low > 90
Ralstonia solanacearum IBSBF1503 0.50 RALBFv3_RS00445 ribonuclease HII 0.25 RALBFv3_RS17425 protein phosphatase CheZ — —
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS11895 ribonuclease HII 0.26 ABZR87_RS18000 protein phosphatase CheZ low > 80
Acidovorax sp. GW101-3H11 0.49 Ac3H11_432 Ribonuclease HII (EC 3.1.26.4) 0.21 Ac3H11_1386 Chemotaxis response - phosphatase CheZ low > 79
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS11805 ribonuclease HII 0.25 RR42_RS35775 chemotaxis protein CheZ low > 128
Castellaniella sp019104865 MT123 0.47 ABCV34_RS04040 ribonuclease HII 0.25 ABCV34_RS05805 protein phosphatase CheZ low > 48
Xanthomonas campestris pv. campestris strain 8004 0.45 Xcc-8004.3570.1 Ribonuclease HII (EC 3.1.26.4) 0.15 Xcc-8004.2834.1 Chemotaxis response - phosphatase CheZ low > 74

Not shown: 44 genomes with orthologs for CSW01_11440 only; 5 genomes with orthologs for CSW01_10325 only