Conservation of cofitness between CSW01_02420 and CSW01_09600 in Vibrio cholerae E7946 ATCC 55056

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02420 glutaminase 1.0 CSW01_09600 DNA-binding protein HU-beta 0.62 1
Serratia liquefaciens MT49 0.70 IAI46_21450 glutaminase B 0.75 IAI46_05025 DNA-binding protein HU-beta low > 86
Shewanella loihica PV-4 0.69 Shew_1126 glutaminase (RefSeq) 0.74 Shew_2505 histone family protein DNA-binding protein (RefSeq) — —
Rahnella sp. WP5 0.69 EX31_RS02720 glutaminase B 0.75 EX31_RS22260 DNA-binding protein HU-beta low > 89
Shewanella amazonensis SB2B 0.68 Sama_2487 Glutaminase (EC 3.5.1.2) (from data) 0.72 Sama_1227 HU family DNA-binding protein (RefSeq) — —
Escherichia coli BL21 0.67 ECD_01481 glutaminase 2 0.75 ECD_00392 HU, DNA-binding transcriptional regulator, beta subunit low > 61
Escherichia fergusonii Becca 0.67 EFB2_02436 Glutaminase 2 0.75 EFB2_03617 DNA-binding protein HU-beta low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_02195 Glutaminase 2 0.75 OHPLBJKB_03233 DNA-binding protein HU-beta low > 74
Escherichia coli ECRC101 0.67 MCAODC_16810 glsB glutaminase B 0.74 MCAODC_27540 hupB DNA-binding protein HU-beta low > 88
Escherichia coli ECRC99 0.67 KEDOAH_27315 glsB glutaminase B 0.74 KEDOAH_19650 hupB DNA-binding protein HU-beta — —
Escherichia coli Nissle 1917 0.67 ECOLIN_RS08705 glutaminase B 0.74 ECOLIN_RS02640 nucleoid-associated protein HU-beta — —
Escherichia coli ECOR38 0.67 HEPCGN_26645 glsB glutaminase B 0.74 HEPCGN_06930 hupB DNA-binding protein HU-beta low > 88
Escherichia coli ECRC102 0.67 NIAGMN_25260 glsB glutaminase B 0.74 NIAGMN_06370 hupB DNA-binding protein HU-beta low > 80
Klebsiella pneumoniae MKP103 0.67 KDGMDA_21590 glutaminase B 0.76 KDGMDA_14625 DNA-binding protein HU-beta 0.38 65
Escherichia coli ECRC98 0.67 JDDGAC_03625 glsB glutaminase B 0.74 JDDGAC_11970 hupB DNA-binding protein HU-beta low > 87
Escherichia coli ECRC62 0.67 BNILDI_17245 glsB glutaminase B 0.74 BNILDI_22665 hupB DNA-binding protein HU-beta low > 75
Escherichia coli BW25113 0.67 b1524 yneH predicted glutaminase (NCBI) 0.75 b0440 hupB HU, DNA-binding transcriptional regulator, beta subunit (NCBI) low > 76
Escherichia coli ECOR27 0.67 NOLOHH_18765 glsB glutaminase B 0.74 NOLOHH_01250 hupB DNA-binding protein HU-beta low > 76
Escherichia coli ECRC100 0.67 OKFHMN_01115 glsB glutaminase B 0.74 OKFHMN_08315 hupB DNA-binding protein HU-beta — —
Klebsiella michiganensis M5al 0.67 BWI76_RS15200 glutaminase 0.76 BWI76_RS06540 DNA-binding protein HU-beta low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF2512 Glutaminase (EC 3.5.1.2) 0.75 GFF4356 DNA-binding protein HU-beta low > 78
Enterobacter asburiae PDN3 0.65 EX28DRAFT_1196 L-glutaminase (EC 3.5.1.2) 0.76 EX28DRAFT_2530 Bacterial nucleoid DNA-binding protein low > 76
Enterobacter sp. TBS_079 0.65 MPMX20_02271 Glutaminase 2 0.76 MPMX20_01031 DNA-binding protein HU-beta low > 85
Shewanella sp. ANA-3 0.64 Shewana3_1184 Glutaminase (EC 3.5.1.2) (from data) 0.75 Shewana3_2658 histone family protein DNA-binding protein (RefSeq) — —
Shewanella oneidensis MR-1 0.64 SO3365 glsA Glutaminase (EC 3.5.1.2) (from data) 0.76 SO1797 DNA-binding protein, HU family (NCBI ptt file) — —
Pantoea sp. MT58 0.62 IAI47_20610 glutaminase B 0.75 IAI47_14640 DNA-binding protein HU-beta low > 76
Pantoea agglomerans CFBP13505 P0401 0.62 PagCFBP13505_RS14195 glutaminase B 0.75 PagCFBP13505_RS10555 DNA-binding protein HU-beta low > 74
Pseudomonas aeruginosa PA14 0.61 IKLFDK_07855 glutaminase B 0.74 IKLFDK_08765 DNA-binding protein HU-beta — —
Pseudomonas sp. SVBP6 0.60 COO64_RS07985 glsB glutaminase B 0.69 COO64_RS19210 HU family DNA-binding protein low > 93
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_2292 L-glutaminase 0.68 Psyr_1750 bacterial nucleoid protein HU beta subunit — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_2292 L-glutaminase 0.68 Psyr_1750 bacterial nucleoid protein HU beta subunit — —
Pseudomonas simiae WCS417 0.58 PS417_15505 glutaminase 0.69 PS417_17220 transcriptional regulator HU subunit alpha — —
Pseudomonas fluorescens SBW25 0.58 PFLU_RS17490 glutaminase B 0.69 PFLU_RS19155 HU family DNA-binding protein — —
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS17490 glutaminase B 0.69 PFLU_RS19155 HU family DNA-binding protein — —
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_26790 Glutaminase (EC 3.5.1.2) (from data) 0.67 AO353_20190 DNA-binding protein HU — —
Pseudomonas stutzeri RCH2 0.56 Psest_4081 Glutaminase (EC 3.5.1.2) (from data) 0.73 Psest_2284 Bacterial nucleoid DNA-binding protein — —
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_4436 Glutaminase (EC 3.5.1.2) 0.67 Pf1N1B4_3948 DNA-binding protein HU-beta — —
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_2102 Glutaminase (EC 3.5.1.2) (from data) 0.67 Pf6N2E2_2215 DNA-binding protein HU-beta — —
Pseudomonas sp. DMC3 0.56 GFF1705 Glutaminase 2 0.68 GFF1446 DNA-binding protein HU-beta — —
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_21690 Glutaminase (EC 3.5.1.2) (from data) 0.67 AO356_01735 DNA-binding protein HU — —
Pseudomonas sp. S08-1 0.55 OH686_13270 glutaminase A 0.74 OH686_03630 DNA-binding protein HU-beta — —
Paraburkholderia bryophila 376MFSha3.1 0.53 H281DRAFT_05933 L-glutaminase 0.67 H281DRAFT_00899 bacterial nucleoid protein Hbs — —
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS37220 glutaminase 0.68 QEN71_RS21970 HU family DNA-binding protein low > 153
Burkholderia phytofirmans PsJN 0.52 BPHYT_RS27475 glutaminase 0.68 BPHYT_RS09465 transcriptional regulator — —
Paraburkholderia graminis OAS925 0.52 ABIE53_005812 glutaminase 0.67 ABIE53_002118 DNA-binding protein HU-beta low > 113
Ralstonia solanacearum GMI1000 0.52 RS_RS22635 glutaminase 0.59 RS_RS08660 HU family DNA-binding protein — —
Ralstonia solanacearum PSI07 0.52 RPSI07_RS05275 glutaminase 0.59 RPSI07_RS16140 HU family DNA-binding protein — —
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS18315 glutaminase 0.59 RALBFv3_RS01335 HU family DNA-binding protein — —
Ralstonia solanacearum UW163 0.51 UW163_RS20815 glutaminase 0.59 UW163_RS14645 HU family DNA-binding protein — —
Alteromonas macleodii MIT1002 0.51 MIT1002_02828 Glutaminase 2 0.81 MIT1002_02756 hypothetical protein — —
Ralstonia sp. UNC404CL21Col 0.50 ABZR87_RS19345 glutaminase 0.56 ABZR87_RS12780 HU family DNA-binding protein low > 80
Phocaeicola vulgatus CL09T03C04 0.49 HMPREF1058_RS12480 glutaminase 0.49 HMPREF1058_RS10500 HU family DNA-binding protein low > 67
Hydrogenophaga sp. GW460-11-11-14-LB1 0.46 GFF1576 Glutaminase (EC 3.5.1.2) 0.65 GFF3853 DNA-binding protein HU-beta low > 90
Variovorax sp. SCN45 0.43 GFF3469 Glutaminase (EC 3.5.1.2) 0.66 GFF2853 DNA-binding protein HU-beta low > 127
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS04140 glutaminase 0.65 HSERO_RS12900 transcriptional regulator HU subunit alpha — —
Variovorax sp. OAS795 0.43 ABID97_RS03300 glutaminase 0.67 ABID97_RS10665 HU family DNA-binding protein — —
Caulobacter crescentus NA1000 0.40 CCNA_00278 glutaminase 0.46 CCNA_02036 DNA-binding protein HU low > 66
Caulobacter crescentus NA1000 Δfur 0.40 CCNA_00278 glutaminase 0.46 CCNA_02036 DNA-binding protein HU low > 67
Bacteroides stercoris CC31F 0.27 HMPREF1181_RS10705 glutaminase A 0.49 HMPREF1181_RS01105 HU family DNA-binding protein low > 56
Bacteroides thetaiotaomicron VPI-5482 0.25 BT2571 putative glutaminase (NCBI ptt file) 0.53 BT2830 DNA-binding protein HU-beta (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.24 BACOVA_00112 glutaminase A 0.51 BACOVA_02078 DNA-binding protein HU low > 96

Not shown: 16 genomes with orthologs for CSW01_02420 only; 34 genomes with orthologs for CSW01_09600 only