Conservation of cofitness between CSW01_11925 and CSW01_07835 in Vibrio cholerae E7946 ATCC 55056

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11925 TatD family deoxyribonuclease 1.0 CSW01_07835 catalase-peroxidase 0.61 19
Enterobacter sp. TBS_079 0.42 MPMX20_00677 putative metal-dependent hydrolase YjjV 0.56 MPMX20_04528 Catalase-peroxidase low > 85
Escherichia coli ECRC62 0.42 BNILDI_08020 tatD metal-dependent hydrolase 0.57 BNILDI_05730 katG catalase/peroxidase HPI low > 75
Enterobacter asburiae PDN3 0.42 EX28DRAFT_3587 Mg-dependent DNase 0.57 EX28DRAFT_4414 catalase/peroxidase HPI — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF1040 Putative deoxyribonuclease YjjV 0.57 GFF2330 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 78
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_03683 putative metal-dependent hydrolase YjjV 0.57 OHPLBJKB_04108 Catalase-peroxidase low > 74
Escherichia fergusonii Becca 0.41 EFB2_04068 putative metal-dependent hydrolase YjjV 0.57 EFB2_04671 Catalase-peroxidase low > 86
Escherichia coli ECOR38 0.41 HEPCGN_09265 tatD metal-dependent hydrolase 0.57 HEPCGN_12305 katG catalase/peroxidase HPI low > 88
Escherichia coli BW25113 0.41 b4378 yjjV predicted DNase (NCBI) 0.57 b3942 katG catalase/hydroperoxidase HPI(I) (NCBI) low > 76
Klebsiella michiganensis M5al 0.41 BWI76_RS04120 metal-dependent hydrolase 0.55 BWI76_RS13925 catalase/peroxidase HPI low > 92
Escherichia coli BL21 0.41 ECD_04254 putative DNase 0.57 ECD_03828 catalase-peroxidase HPI, heme b-containing 0.45 57
Escherichia coli ECRC100 0.41 OKFHMN_11260 yjjV metal-dependent hydrolase 0.57 OKFHMN_13660 katG catalase/peroxidase HPI low > 79
Dickeya dadantii 3937 0.41 DDA3937_RS02460 TatD family hydrolase 0.62 DDA3937_RS07265 catalase/peroxidase HPI low > 74
Escherichia coli ECRC99 0.41 KEDOAH_16885 yjjV metal-dependent hydrolase 0.57 KEDOAH_14500 katG catalase/peroxidase HPI — —
Escherichia coli ECOR27 0.41 NOLOHH_03580 yjjV metal-dependent hydrolase 0.57 NOLOHH_05805 katG catalase/peroxidase HPI low > 76
Escherichia coli Nissle 1917 0.41 ECOLIN_RS25130 metal-dependent hydrolase 0.57 ECOLIN_RS22765 catalase/peroxidase HPI low > 55
Escherichia coli ECRC101 0.41 MCAODC_01775 yjjV metal-dependent hydrolase 0.57 MCAODC_04160 katG catalase/peroxidase HPI low > 87
Escherichia coli ECRC102 0.41 NIAGMN_09110 yjjV metal-dependent hydrolase 0.57 NIAGMN_11415 katG catalase/peroxidase HPI low > 80
Escherichia coli ECRC98 0.41 JDDGAC_14855 yjjV metal-dependent hydrolase 0.57 JDDGAC_17285 katG catalase/peroxidase HPI low > 87
Klebsiella pneumoniae MKP103 0.41 KDGMDA_12390 metal-dependent hydrolase 0.56 KDGMDA_22580 Catalase-peroxidase low > 95
Pectobacterium carotovorum WPP14 0.40 HER17_RS19045 TatD family hydrolase 0.80 HER17_RS09165 catalase/peroxidase HPI low > 75
Dickeya dianthicola ME23 0.40 DZA65_RS02520 metal-dependent hydrolase 0.62 DZA65_RS08685 catalase/peroxidase HPI low > 75
Pantoea agglomerans CFBP13505 P0401 0.40 PagCFBP13505_RS16310 YchF/TatD family DNA exonuclease 0.54 PagCFBP13505_RS01335 catalase/peroxidase HPI low > 74
Dickeya dianthicola 67-19 0.40 HGI48_RS02415 TatD family hydrolase 0.62 HGI48_RS08090 catalase/peroxidase HPI low > 71
Pantoea sp. MT58 0.39 IAI47_03395 metal-dependent hydrolase 0.54 IAI47_07215 catalase/peroxidase HPI low > 76
Erwinia amylovora T8 0.38 OLJFJH_01630 metal-dependent hydrolase 0.54 OLJFJH_12450 catalase/peroxidase HPI low > 58
Serratia liquefaciens MT49 0.38 IAI46_02900 TatD family hydrolase 0.61 IAI46_17030 catalase/peroxidase HPI low > 87
Erwinia tracheiphila SCR3 0.38 LU632_RS02510 TatD family hydrolase 0.55 LU632_RS19500 katG catalase/peroxidase HPI — —
Erwinia tracheiphila HP pepo 2.2 0.37 IJEDHG_06420 metal-dependent hydrolase 0.55 IJEDHG_12560 katG catalase/peroxidase HPI — —
Rahnella sp. WP5 0.36 EX31_RS04070 deoxyribonuclease YjjV 0.54 EX31_RS11140 catalase/peroxidase HPI low > 89
Marinobacter adhaerens HP15 0.36 HP15_542 TatD-related deoxyribonuclease 0.76 HP15_1397 peroxidase/catalase HPI low > 73
Alteromonas macleodii MIT1002 0.35 MIT1002_02710 putative deoxyribonuclease YjjV 0.51 MIT1002_03345 Catalase-peroxidase 2 precursor low > 70
Pseudomonas sp. S08-1 0.32 OH686_16550 Putative deoxyribonuclease YjjV 0.58 OH686_15490 catalase/peroxidase HPI low > 80
Pseudomonas sp. SVBP6 0.32 COO64_RS11265 TatD family hydrolase 0.60 COO64_RS08175 katG catalase/peroxidase HPI low > 93
Pseudomonas sp. BP01 0.32 JOY50_RS19325 TatD family hydrolase 0.58 JOY50_RS07970 katG catalase/peroxidase HPI low > 84
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_3341 Putative deoxyribonuclease YjjV 0.60 Pf6N2E2_3430 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 103
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_1148 Putative deoxyribonuclease YjjV 0.58 Pf1N1B4_4230 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 87
Kangiella aquimarina DSM 16071 0.32 B158DRAFT_2240 Mg-dependent DNase 0.81 B158DRAFT_0317 catalase/peroxidase HPI low > 40
Pseudomonas stutzeri RCH2 0.32 Psest_0728 hydrolase, TatD family 0.55 Psest_2741 catalase/peroxidase HPI low > 67
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_05495 hydrolase TatD 0.60 AO353_23210 hydroperoxidase low > 101
Pseudomonas sp. DMC3 0.31 GFF5001 putative metal-dependent hydrolase YjjV 0.61 GFF1038 Catalase-peroxidase low > 89
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_07345 hydrolase TatD 0.60 AO356_07735 hydroperoxidase low > 104
Lysobacter sp. OAE881 0.31 ABIE51_RS12580 TatD family hydrolase 0.60 ABIE51_RS07780 catalase/peroxidase HPI low > 62
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_0819 TatD-related deoxyribonuclease 0.62 Psyr_4208 heme catalase/peroxidase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_0819 TatD-related deoxyribonuclease 0.62 Psyr_4208 heme catalase/peroxidase low > 86
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.3493.1 Putative deoxyribonuclease YjjV 0.59 Xcc-8004.3762.1 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 74
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS06375 TatD family hydrolase 0.63 ABZR86_RS00615 catalase/peroxidase HPI low > 74
Acinetobacter baumannii LAC-4 0.29 RR41_RS16185 TatD family hydrolase 0.56 RR41_RS16940 catalase/peroxidase HPI low > 55
Shewanella sp. ANA-3 0.29 Shewana3_1038 TatD-related deoxyribonuclease (RefSeq) 0.77 Shewana3_0306 catalase/peroxidase HPI (RefSeq) low > 73
Shewanella oneidensis MR-1 0.29 SO1213 hydrolase, TatD family (NCBI ptt file) 0.78 SO4405 katG-2 catalase/peroxidase HPI (NCBI ptt file) low > 76
Pseudomonas putida KT2440 0.29 PP_0791 putative hydrolase 0.59 PP_3668 Catalase-peroxidase low > 96
Methylophilus sp. DMC18 0.28 GFF76 putative metal-dependent hydrolase YjjV 0.79 GFF2031 Catalase-peroxidase low > 43
Ralstonia sp. UNC404CL21Col 0.28 ABZR87_RS10420 TatD family hydrolase 0.57 ABZR87_RS01240 catalase/peroxidase HPI low > 80
Herbaspirillum seropedicae SmR1 0.27 HSERO_RS13935 DNAase 0.58 HSERO_RS06245 catalase-peroxidase low > 78
Paraburkholderia bryophila 376MFSha3.1 0.27 H281DRAFT_00492 TatD DNase family protein 0.57 H281DRAFT_00053 catalase-peroxidase low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.26 GFF744 Putative deoxyribonuclease YjjV 0.58 GFF637 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 90
Acidovorax sp. GW101-3H11 0.26 Ac3H11_1737 Putative deoxyribonuclease YjjV 0.57 Ac3H11_135 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 79
Paraburkholderia sabiae LMG 24235 0.26 QEN71_RS05855 TatD family hydrolase 0.59 QEN71_RS29740 catalase/peroxidase HPI low > 153
Cupriavidus basilensis FW507-4G11 0.25 RR42_RS06110 DNAase 0.58 RR42_RS26270 hydroperoxidase — —
Ralstonia solanacearum UW163 0.25 UW163_RS12230 TatD family deoxyribonuclease 0.61 UW163_RS00460 catalase/peroxidase HPI — —
Ralstonia solanacearum IBSBF1503 0.25 RALBFv3_RS14760 TatD family deoxyribonuclease 0.61 RALBFv3_RS13105 catalase/peroxidase HPI low > 76
Variovorax sp. SCN45 0.24 GFF6080 Putative deoxyribonuclease YjjV 0.60 GFF4692 Catalase-peroxidase KatG (EC 1.11.1.21) low > 127
Burkholderia phytofirmans PsJN 0.24 BPHYT_RS12705 DNAase 0.60 BPHYT_RS10310 catalase-peroxidase low > 109
Ralstonia solanacearum PSI07 0.24 RPSI07_RS18600 TatD family deoxyribonuclease 0.62 RPSI07_RS20110 catalase/peroxidase HPI low > 81
Shewanella amazonensis SB2B 0.22 Sama_0970 TatD-related deoxyribonuclease (RefSeq) 0.82 Sama_3270 catalase (RefSeq) low > 62

Not shown: 20 genomes with orthologs for CSW01_11925 only; 22 genomes with orthologs for CSW01_07835 only