Conservation of cofitness between CSW01_19050 and CSW01_07625 in Vibrio cholerae E7946 ATCC 55056

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_19050 phosphoenolpyruvate synthase 1.0 CSW01_07625 sulfurtransferase FdhD 0.68 11
Serratia liquefaciens MT49 0.72 IAI46_11115 phosphoenolpyruvate synthase 0.12 IAI46_00205 formate dehydrogenase accessory sulfurtransferase FdhD low > 87
Rahnella sp. WP5 0.72 EX31_RS13935 phosphoenolpyruvate synthase 0.10 EX31_RS05780 formate dehydrogenase accessory sulfurtransferase FdhD low > 89
Pseudomonas aeruginosa PUPa3 0.71 DQ20_RS54620 ppsA;go_function=ATP phosphoenolpyruvate synthase 0.09 DQ20_RS50350 fdhD;go_component=formate formate dehydrogenase accessory sulfurtransferase FdhD low > 101
Pseudomonas aeruginosa MRSN321 0.71 DY961_RS20540 ppsA;go_function=ATP phosphoenolpyruvate synthase 0.09 DY961_RS11760 fdhD;go_component=formate formate dehydrogenase accessory sulfurtransferase FdhD low > 100
Pseudomonas aeruginosa PA14 0.71 IKLFDK_08555 phosphoenolpyruvate synthase 0.09 IKLFDK_27585 formate dehydrogenase accessory sulfurtransferase FdhD low > 98
Enterobacter asburiae PDN3 0.71 EX28DRAFT_1704 phosphoenolpyruvate synthase (EC 2.7.9.2) 0.10 EX28DRAFT_4379 formate dehydrogenase family accessory protein FdhD low > 76
Dickeya dianthicola 67-19 0.71 HGI48_RS12875 phosphoenolpyruvate synthase 0.10 HGI48_RS00290 formate dehydrogenase accessory sulfurtransferase FdhD low > 71
Dickeya dianthicola ME23 0.71 DZA65_RS13340 phosphoenolpyruvate synthase 0.10 DZA65_RS00290 formate dehydrogenase accessory sulfurtransferase FdhD low > 75
Pantoea agglomerans CFBP13505 P0401 0.71 PagCFBP13505_RS17685 phosphoenolpyruvate synthase 0.12 PagCFBP13505_RS15775 formate dehydrogenase accessory sulfurtransferase FdhD low > 74
Pantoea sp. MT58 0.71 IAI47_10905 phosphoenolpyruvate synthase 0.12 IAI47_18740 formate dehydrogenase accessory sulfurtransferase FdhD low > 76
Dickeya dadantii 3937 0.71 DDA3937_RS12805 phosphoenolpyruvate synthase 0.10 DDA3937_RS20955 formate dehydrogenase accessory sulfurtransferase FdhD low > 74
Shewanella amazonensis SB2B 0.71 Sama_2072 phosphoenolpyruvate synthase (RefSeq) 0.61 Sama_3619 formate dehydrogenase accessory protein FdhD, putative (RefSeq) low > 62
Pseudomonas fluorescens FW300-N2E3 0.71 AO353_00865 phosphoenolpyruvate synthase 0.10 AO353_11830 formate dehydrogenase family accessory protein FdhD low > 101
Enterobacter sp. TBS_079 0.70 MPMX20_01922 Phosphoenolpyruvate synthase 0.10 MPMX20_04574 Sulfur carrier protein FdhD low > 85
Erwinia amylovora T8 0.70 OLJFJH_14620 phosphoenolpyruvate synthase 0.10 OLJFJH_05050 formate dehydrogenase accessory sulfurtransferase FdhD low > 58
Pseudomonas fluorescens FW300-N1B4 0.70 Pf1N1B4_3826 Phosphoenolpyruvate synthase (EC 2.7.9.2) 0.09 Pf1N1B4_1673 Formate dehydrogenase chain D (EC 1.2.1.2) low > 87
Escherichia coli ECOR38 0.70 HEPCGN_05510 ppsA phosphoenolpyruvate synthase 0.11 HEPCGN_12585 fdhD formate dehydrogenase accessory sulfurtransferase FdhD low > 88
Escherichia fergusonii Becca 0.70 EFB2_02289 Phosphoenolpyruvate synthase 0.11 EFB2_04720 Sulfur carrier protein FdhD low > 86
Escherichia coli ECRC101 0.70 MCAODC_18265 ppsA phosphoenolpyruvate synthase 0.11 MCAODC_04450 fdhD formate dehydrogenase accessory sulfurtransferase FdhD low > 87
Escherichia coli ECRC62 0.70 BNILDI_16455 ppsA phosphoenolpyruvate synthase 0.11 BNILDI_05455 fdhD formate dehydrogenase accessory sulfurtransferase FdhD low > 75
Escherichia coli ECRC102 0.70 NIAGMN_00920 ppsA phosphoenolpyruvate synthase 0.11 NIAGMN_11705 fdhD formate dehydrogenase accessory sulfurtransferase FdhD low > 80
Escherichia coli ECOR27 0.70 NOLOHH_17665 ppsA phosphoenolpyruvate synthase 0.11 NOLOHH_06070 fdhD formate dehydrogenase accessory sulfurtransferase FdhD low > 76
Escherichia coli BW25113 0.70 b1702 pps phosphoenolpyruvate synthase (NCBI) 0.11 b3895 fdhD formate dehydrogenase accessory protein (NCBI) low > 76
Escherichia coli ECRC100 0.70 OKFHMN_27145 ppsA phosphoenolpyruvate synthase 0.11 OKFHMN_13950 fdhD formate dehydrogenase accessory sulfurtransferase FdhD low > 79
Escherichia coli ECRC98 0.70 JDDGAC_01720 ppsA phosphoenolpyruvate synthase 0.11 JDDGAC_17575 fdhD formate dehydrogenase accessory sulfurtransferase FdhD low > 87
Escherichia coli ECRC99 0.70 KEDOAH_00965 ppsA phosphoenolpyruvate synthase 0.11 KEDOAH_14205 fdhD formate dehydrogenase accessory sulfurtransferase FdhD — —
Escherichia coli Nissle 1917 0.70 ECOLIN_RS09510 phosphoenolpyruvate synthase 0.11 ECOLIN_RS22460 formate dehydrogenase accessory sulfurtransferase FdhD — —
Escherichia coli BL21 0.70 ECD_01671 phosphoenolpyruvate synthase 0.11 ECD_03780 formate dehydrogenase formation protein low > 61
Alteromonas macleodii MIT1002 0.70 MIT1002_01816 Phosphoenolpyruvate synthase 0.11 MIT1002_01712 formate dehydrogenase accessory protein low > 70
Marinobacter adhaerens HP15 0.70 HP15_2229 phosphoenolpyruvate synthase 0.40 HP15_4131 formate dehydrogenase family accessory protein FdhD low > 73
Shewanella oneidensis MR-1 0.70 SO2644 ppsA phosphoenolpyruvate synthase (NCBI ptt file) 0.61 SO4503 formate dehydrogenase accessory protein FdhD, putative (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.70 Shewana3_1736 phosphoenolpyruvate synthase (RefSeq) 0.64 Shewana3_3910 formate dehydrogenase accessory protein FdhD, putative (RefSeq) low > 73
Shewanella loihica PV-4 0.70 Shew_1549 phosphoenolpyruvate synthase (RefSeq) 0.62 Shew_0053 formate dehydrogenase, subunit FdhD (RefSeq) — —
Pseudomonas sp. RS175 0.69 PFR28_01038 Phosphoenolpyruvate synthase 0.09 PFR28_04882 Sulfur carrier protein FdhD low > 88
Pseudomonas fluorescens GW456-L13 0.69 PfGW456L13_4112 Phosphoenolpyruvate synthase (EC 2.7.9.2) 0.10 PfGW456L13_408 Formate dehydrogenase chain D (EC 1.2.1.2) low > 87
Dechlorosoma suillum PS 0.67 Dsui_2677 phosphoenolpyruvate synthase 0.13 Dsui_3279 formate dehydrogenase family accessory protein FdhD — —
Xanthomonas campestris pv. campestris strain 8004 0.63 Xcc-8004.2412.1 Phosphoenolpyruvate synthase (EC 2.7.9.2) 0.12 Xcc-8004.2194.1 Formate dehydrogenase chain D (EC 1.2.1.2) low > 74
Castellaniella sp019104865 MT123 0.63 ABCV34_RS04025 phosphoenolpyruvate synthase 0.10 ABCV34_RS00240 formate dehydrogenase accessory sulfurtransferase FdhD — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.63 GFF3920 Phosphoenolpyruvate synthase (EC 2.7.9.2) 0.44 GFF1188 Formate dehydrogenase chain D (EC 1.2.1.2) low > 90
Lysobacter sp. OAE881 0.63 ABIE51_RS09520 phosphoenolpyruvate synthase 0.12 ABIE51_RS14800 formate dehydrogenase accessory sulfurtransferase FdhD low > 62
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS11925 phosphoenolpyruvate synthase 0.48 ABZR87_RS16190 formate dehydrogenase accessory sulfurtransferase FdhD low > 80
Ralstonia solanacearum IBSBF1503 0.62 RALBFv3_RS00475 phosphoenolpyruvate synthase 0.47 RALBFv3_RS04335 sufurtransferase FdhD — —
Variovorax sp. SCN45 0.62 GFF2818 Phosphoenolpyruvate synthase (EC 2.7.9.2) 0.10 GFF5642 Sulfur carrier protein FdhD — —
Acidovorax sp. GW101-3H11 0.62 Ac3H11_206 Phosphoenolpyruvate synthase (EC 2.7.9.2) 0.48 Ac3H11_3797 Formate dehydrogenase chain D (EC 1.2.1.2) low > 79
Paraburkholderia sabiae LMG 24235 0.62 QEN71_RS06505 phosphoenolpyruvate synthase 0.10 QEN71_RS02080 formate dehydrogenase accessory sulfurtransferase FdhD low > 153
Ralstonia solanacearum GMI1000 0.62 RS_RS07130 phosphoenolpyruvate synthase 0.48 RS_RS11885 sufurtransferase FdhD low > 80
Paraburkholderia graminis OAS925 0.62 ABIE53_002485 pyruvate,water dikinase 0.10 ABIE53_000787 FdhD protein low > 113
Dyella japonica UNC79MFTsu3.2 0.62 ABZR86_RS07250 phosphoenolpyruvate synthase 0.12 ABZR86_RS03590 formate dehydrogenase accessory sulfurtransferase FdhD low > 74
Burkholderia phytofirmans PsJN 0.62 BPHYT_RS12055 phosphoenolpyruvate synthase 0.11 BPHYT_RS03240 formate dehydrogenase accessory protein FdhD low > 109
Paraburkholderia bryophila 376MFSha3.1 0.62 H281DRAFT_00627 phosphoenolpyruvate synthase 0.11 H281DRAFT_06437 FdhD protein low > 103
Variovorax sp. OAS795 0.62 ABID97_RS10815 phosphoenolpyruvate synthase 0.45 ABID97_RS07590 formate dehydrogenase accessory sulfurtransferase FdhD low > 91
Ralstonia solanacearum PSI07 0.62 RPSI07_RS17015 phosphoenolpyruvate synthase 0.48 RPSI07_RS13035 sufurtransferase FdhD low > 81
Cupriavidus basilensis FW507-4G11 0.62 RR42_RS11790 phosphoenolpyruvate synthase 0.47 RR42_RS15950 formate dehydrogenase 0.37 77
Ralstonia solanacearum UW163 0.61 UW163_RS13805 phosphoenolpyruvate synthase 0.47 UW163_RS09335 sufurtransferase FdhD — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.49 ABZR88_RS11705 phosphoenolpyruvate synthase 0.14 ABZR88_RS07865 formate dehydrogenase accessory sulfurtransferase FdhD low > 71
Methanococcus maripaludis JJ 0.27 MMJJ_RS08695 phosphoenolpyruvate synthase 0.14 MMJJ_RS08005 formate dehydrogenase accessory sulfurtransferase FdhD — —
Sinorhizobium meliloti 1021 0.07 SMc00025 pyruvate phosphate dikinase 0.11 SMc03085 formate dehydrogenase accessory protein low > 103

Not shown: 33 genomes with orthologs for CSW01_19050 only; 9 genomes with orthologs for CSW01_07625 only