Conservation of cofitness between CSW01_07155 and CSW01_06260 in Vibrio cholerae E7946 ATCC 55056

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07155 spermidine/putrescine ABC transporter permease PotB 1.0 CSW01_06260 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 0.49 10
Escherichia fergusonii Becca 0.73 EFB2_02850 Spermidine/putrescine transport system permease protein PotB 0.24 EFB2_01898 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 86
Escherichia coli ECOR38 0.73 HEPCGN_24070 potB spermidine/putrescine ABC transporter permease PotB 0.24 HEPCGN_03470 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 88
Escherichia coli ECRC62 0.73 BNILDI_19105 potB spermidine/putrescine ABC transporter permease PotB 0.24 BNILDI_14875 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_02543 Spermidine/putrescine transport system permease protein PotB 0.24 OHPLBJKB_01717 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 74
Escherichia coli ECOR27 0.73 NOLOHH_20940 potB spermidine/putrescine ABC transporter permease PotB 0.24 NOLOHH_16045 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF3409 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) 0.22 GFF3969 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) low > 78
Escherichia coli BL21 0.72 ECD_01123 spermidine/putrescine ABC transporter permease 0.24 ECD_01900 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Escherichia coli BW25113 0.72 b1125 potB spermidine/putrescine ABC transporter membrane protein (NCBI) 0.24 b1991 cobT nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferase (NCBI) low > 76
Escherichia coli ECRC102 0.72 NIAGMN_24745 potB spermidine/putrescine ABC transporter permease PotB 0.24 NIAGMN_22640 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 80
Escherichia coli ECRC99 0.72 KEDOAH_24705 potB spermidine/putrescine ABC transporter permease PotB 0.24 KEDOAH_02975 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Escherichia coli ECRC98 0.72 JDDGAC_06745 potB spermidine/putrescine ABC transporter permease PotB 0.24 JDDGAC_29265 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 87
Escherichia coli ECRC100 0.72 OKFHMN_00620 potB spermidine/putrescine ABC transporter permease PotB 0.24 OKFHMN_25135 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 79
Escherichia coli ECRC101 0.72 MCAODC_22465 potB spermidine/putrescine ABC transporter permease PotB 0.24 MCAODC_20255 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 88
Klebsiella michiganensis M5al 0.70 BWI76_RS11250 spermidine/putrescine ABC transporter permease PotB 0.21 BWI76_RS23000 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 92
Klebsiella pneumoniae MKP103 0.70 KDGMDA_18855 spermidine/putrescine ABC transporter permease PotB 0.23 KDGMDA_26000 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 95
Desulfovibrio vulgaris Miyazaki F 0.50 DvMF_1959 binding-protein-dependent transport systems inner membrane component (RefSeq) 0.29 DvMF_2122 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase (RefSeq) low > 51
Desulfovibrio vulgaris Hildenborough JW710 0.48 DVU0097 potB polyamine ABC transporter, permease protein (TIGR) 0.31 DVU3279 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (TIGR) low > 55
Pseudomonas aeruginosa PA14 0.37 IKLFDK_18420 polyamine transport protein PotB 0.32 IKLFDK_06065 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 100
Magnetospirillum magneticum AMB-1 0.36 AMB_RS13200 putrescine ABC transporter permease PotH 0.24 AMB_RS02805 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Caulobacter crescentus NA1000 0.36 CCNA_03238 ABC-type spermidine/putrescine transport system, permease component II 0.11 CCNA_01367 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 66
Caulobacter crescentus NA1000 Δfur 0.36 CCNA_03238 ABC-type spermidine/putrescine transport system, permease component II 0.11 CCNA_01367 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 67
Shewanella oneidensis MR-1 0.36 SO1272 polyamine ABC transporter, permease protein (NCBI ptt file) 0.43 SO1035 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (NCBI ptt file) low > 76
Pseudomonas segetis P6 0.36 MPMX49_03970 hypothetical protein 0.30 MPMX49_01824 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 75
Bosea sp. OAE506 0.35 ABIE41_RS21640 ABC transporter permease subunit 0.26 ABIE41_RS21245 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_25425 ABC transporter permease 0.31 AO353_02605 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 101
Pseudomonas fluorescens GW456-L13 0.35 PfGW456L13_1568 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) 0.31 PfGW456L13_4236 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) low > 87
Azospirillum sp. SherDot2 0.35 MPMX19_04881 Putrescine transport system permease protein PotH 0.27 MPMX19_00312 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Shewanella sp. ANA-3 0.34 Shewana3_3095 binding-protein-dependent transport systems inner membrane component (RefSeq) 0.44 Shewana3_3278 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (RefSeq) low > 73
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS12955 ABC transporter permease subunit 0.40 QEN71_RS25130 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 153
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS23140 putrescine/spermidine ABC transporter permease 0.37 BPHYT_RS04865 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 109
Rhodospirillum rubrum S1H 0.34 Rru_A1016 Binding-protein-dependent transport systems inner membrane component (NCBI) 0.20 Rru_A0667 Nicotinate-nucleotide-dimethylbenzimidazolephosphoribosyltransferase (NCBI) 0.81 1
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_4862 Binding-protein-dependent transport systems inner membrane component 0.32 Psyr_3674 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_4862 Binding-protein-dependent transport systems inner membrane component 0.32 Psyr_3674 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase low > 86
Hydrogenophaga sp. GW460-11-11-14-LB1 0.33 GFF2033 Putrescine transport system permease protein PotH (TC 3.A.1.11.2) 0.31 GFF3999 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) — —
Pseudomonas sp. DMC3 0.33 GFF284 Putrescine transport system permease protein PotH 0.26 GFF2554 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 89
Paraburkholderia bryophila 376MFSha3.1 0.33 H281DRAFT_05182 putrescine transport system permease protein 0.38 H281DRAFT_00139 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase low > 103
Pseudomonas sp. S08-1 0.33 OH686_11315 Spermidine/putrescine import ABC transporter permease protein PotB 0.30 OH686_04955 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 80
Rahnella sp. WP5 0.33 EX31_RS09620 putrescine ABC transporter permease PotH 0.24 EX31_RS09920 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 89
Escherichia coli Nissle 1917 0.33 ECOLIN_RS04560 putrescine ABC transporter permease PotH 0.24 ECOLIN_RS11620 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 55
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS28760 ABC transporter permease subunit 0.26 PFLU_RS21995 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 109
Pseudomonas lactucae CFBP13502 0.32 GEMAOFIL_05562 Putrescine transport system permease protein PotH 0.26 GEMAOFIL_04203 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 93
Pseudomonas fluorescens SBW25 0.32 PFLU_RS28760 ABC transporter permease subunit 0.26 PFLU_RS21995 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 109
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_2262 Lysine ABC transporter, permease component (from data) 0.31 Pf1N1B4_3713 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) low > 87
Pseudomonas simiae WCS417 0.32 PS417_27110 spermidine/putrescine ABC transporter permease 0.24 PS417_20030 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 88
Fusobacterium nucleatum SB010 0.32 HUW76_00745 ABC transporter permease 0.25 HUW76_05630 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 35
Pseudomonas sp. RS175 0.32 PFR28_04292 Putrescine transport system permease protein PotH 0.31 PFR28_03202 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 88
Shewanella loihica PV-4 0.32 Shew_0975 binding-protein-dependent transport systems inner membrane component (RefSeq) 0.42 Shew_0714 cobT nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferase (RefSeq) low > 60
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_13170 spermidine/putrescine ABC transporter permease 0.31 AO356_19170 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 104
Agrobacterium fabrum C58 0.32 Atu0611 ABC transporter, membrane spanning protein 0.22 Atu1890 cobyrinic acid synthase — —
Pseudomonas sp. SVBP6 0.32 COO64_RS00875 ABC transporter permease subunit 0.27 COO64_RS07215 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 93
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_4516 Putrescine transport system permease protein PotH (TC 3.A.1.11.2) 0.30 Pf6N2E2_5744 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) — —
Azospirillum brasilense Sp245 0.32 AZOBR_RS08835 putrescine/spermidine ABC transporter permease 0.28 AZOBR_RS03460 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Dinoroseobacter shibae DFL-12 0.32 Dshi_1599 binding-protein-dependent transport systems inner membrane component (RefSeq) 0.24 Dshi_0788 Nicotinate-nucleotide--dimethylbenzimidazolephosphoribosyltransferase (RefSeq) — —
Shewanella amazonensis SB2B 0.32 Sama_2640 binding-protein-dependent transport systems inner membrane component (RefSeq) 0.42 Sama_0762 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (RefSeq) low > 62
Pseudomonas sp. BP01 0.31 JOY50_RS22335 ABC transporter permease subunit 0.30 JOY50_RS27975 cobT nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 84
Pseudomonas putida KT2440 0.31 PP_5178 spermidine/putrescine ABC transporter - inner membrane subunit 0.32 PP_1679 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 96
Pseudomonas stutzeri RCH2 0.28 Psest_4281 ABC-type spermidine/putrescine transport system, permease component I 0.31 Psest_3006 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 67
Variovorax sp. OAS795 0.27 ABID97_RS04050 ABC transporter permease 0.31 ABID97_RS17335 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase — —
Acidovorax sp. GW101-3H11 0.26 Ac3H11_1611 ABC transporter, permease protein 0.31 Ac3H11_1000 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) low > 79
Parabacteroides merdae CL09T00C40 0.26 HMPREF1078_RS08115 ABC transporter permease 0.34 HMPREF1078_RS17680 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 61
Phocaeicola vulgatus CL09T03C04 0.26 HMPREF1058_RS03225 ABC transporter permease 0.31 HMPREF1058_RS01275 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 67
Phocaeicola dorei CL03T12C01 0.25 ABI39_RS17815 ABC transporter permease 0.32 ABI39_RS16455 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 72
Variovorax sp. SCN45 0.24 GFF5596 Spermidine/putrescine import ABC transporter permease protein PotB (TC 3.A.1.11.1) 0.31 GFF425 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) — —
Bacteroides ovatus ATCC 8483 0.24 BACOVA_00083 ABC transporter, permease protein 0.33 BACOVA_03275 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 96
Bacteroides stercoris CC31F 0.23 HMPREF1181_RS12425 ABC transporter permease 0.35 HMPREF1181_RS15655 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase low > 56

Not shown: 14 genomes with orthologs for CSW01_07155 only; 24 genomes with orthologs for CSW01_06260 only