Conservation of cofitness between CSW01_08565 and CSW01_05925 in Vibrio cholerae E7946 ATCC 55056

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08565 hypothetical protein 1.0 CSW01_05925 tryptophan synthase subunit alpha 0.55 12
Escherichia coli Nissle 1917 0.80 ECOLIN_RS07555 YciI family protein 0.61 ECOLIN_RS07595 tryptophan synthase subunit alpha
Escherichia fergusonii Becca 0.80 EFB2_02674 Protein YciI 0.61 EFB2_02666 Tryptophan synthase alpha chain low > 86
Escherichia coli BW25113 0.80 b1251 yciI orf, hypothetical protein (VIMSS) 0.61 b1260 trpA tryptophan synthase subunit alpha (NCBI) 0.27 8
Escherichia coli BL21 0.80 ECD_01225 putative DGPF domain-containing enzyme 0.61 ECD_01234 tryptophan synthase, alpha subunit low > 61
Escherichia coli ECRC101 0.79 MCAODC_21590 yciI YciI family protein 0.61 MCAODC_15590 trpA tryptophan synthase subunit alpha low > 87
Escherichia coli ECRC98 0.79 JDDGAC_05905 yciI YciI family protein 0.61 JDDGAC_05220 trpA tryptophan synthase subunit alpha low > 86
Escherichia coli ECRC100 0.79 OKFHMN_28670 yciI YciI family protein 0.61 OKFHMN_02675 trpA tryptophan synthase subunit alpha
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.79 GFF2737 YciL protein 0.62 GFF2726 Tryptophan synthase alpha chain (EC 4.2.1.20) low > 78
Escherichia coli ECRC102 0.79 NIAGMN_27565 yciI YciI family protein 0.61 NIAGMN_26845 trpA tryptophan synthase subunit alpha
Escherichia coli ECOR27 0.79 NOLOHH_20380 yciI YciI family protein 0.61 NOLOHH_20335 trpA tryptophan synthase subunit alpha low > 75
Escherichia coli ECOR38 0.79 HEPCGN_25135 yciI YciI family protein 0.61 HEPCGN_25515 trpA tryptophan synthase subunit alpha low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_02432 Protein YciI 0.61 OHPLBJKB_02423 Tryptophan synthase alpha chain
Escherichia coli ECRC99 0.79 KEDOAH_25665 yciI YciI family protein 0.61 KEDOAH_26075 trpA tryptophan synthase subunit alpha
Enterobacter sp. TBS_079 0.79 MPMX20_02577 Protein YciI 0.62 MPMX20_02514 Tryptophan synthase alpha chain 0.18 74
Shewanella oneidensis MR-1 0.78 SO3036 conserved hypothetical protein (NCBI ptt file) 0.65 SO3024 trpA tryptophan synthase, alpha subunit (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.78 Shew_2261 YciI-like protein (RefSeq) 0.64 Shew_2256 trpA tryptophan synthase subunit alpha (RefSeq) low > 60
Shewanella sp. ANA-3 0.78 Shewana3_1504 YciI-like protein (RefSeq) 0.64 Shewana3_1515 trpA tryptophan synthase subunit alpha (RefSeq) low > 73
Shewanella amazonensis SB2B 0.77 Sama_2138 YciI-like protein (RefSeq) 0.63 Sama_2134 trpA tryptophan synthase subunit alpha (RefSeq) low > 62
Enterobacter asburiae PDN3 0.77 EX28DRAFT_0921 Uncharacterized protein conserved in bacteria 0.62 EX28DRAFT_0932 tryptophan synthase, alpha chain (EC 4.2.1.20) low > 76
Serratia liquefaciens MT49 0.76 IAI46_14115 YciI family protein 0.67 IAI46_14045 tryptophan synthase subunit alpha
Pseudomonas simiae WCS417 0.76 PS417_22285 hypothetical protein 0.29 PS417_00180 tryptophan synthase subunit alpha low > 88
Pseudomonas fluorescens SBW25 0.75 PFLU_RS23925 YciI family protein 0.29 PFLU_RS00175 tryptophan synthase subunit alpha low > 109
Klebsiella michiganensis M5al 0.75 BWI76_RS17195 hypothetical protein 0.62 BWI76_RS11840 tryptophan synthase subunit alpha 0.20 89
Dickeya dianthicola ME23 0.75 DZA65_RS10900 YciI family protein 0.68 DZA65_RS10940 tryptophan synthase subunit alpha low > 75
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS23925 YciI family protein 0.29 PFLU_RS00175 tryptophan synthase subunit alpha low > 109
Dickeya dadantii 3937 0.75 DDA3937_RS10420 YciI family protein 0.68 DDA3937_RS10460 tryptophan synthase subunit alpha low > 74
Pectobacterium carotovorum WPP14 0.75 HER17_RS10975 YciI family protein 0.66 HER17_RS10940 tryptophan synthase subunit alpha low > 75
Pseudomonas fluorescens FW300-N2C3 0.74 AO356_18485 hypothetical protein 0.29 AO356_10910 tryptophan synthase subunit alpha
Pseudomonas sp. RS175 0.74 PFR28_03321 Protein YciI 0.29 PFR28_04716 Tryptophan synthase alpha chain
Dickeya dianthicola 67-19 0.74 HGI48_RS10425 YciI family protein 0.68 HGI48_RS10460 tryptophan synthase subunit alpha low > 71
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_18510 hypothetical protein 0.29 AO353_10705 tryptophan synthase subunit alpha low > 101
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_3588 YCII-related protein 0.28 Psyr_0033 tryptophan synthase, alpha chain
Pseudomonas sp. DMC3 0.73 GFF2397 Protein YciI 0.30 GFF677 Tryptophan synthase alpha chain low > 89
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_3588 YCII-related protein 0.28 Psyr_0033 tryptophan synthase, alpha chain
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_4407 YciL protein 0.29 PfGW456L13_565 Tryptophan synthase alpha chain (EC 4.2.1.20) low > 87
Kangiella aquimarina DSM 16071 0.73 B158DRAFT_2302 Uncharacterized protein conserved in bacteria 0.47 B158DRAFT_2430 tryptophan synthase, alpha chain (EC 4.2.1.20) low > 40
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_3549 YciL protein 0.29 Pf1N1B4_1830 Tryptophan synthase alpha chain (EC 4.2.1.20) low > 87
Pseudomonas putida KT2440 0.72 PP_4502 putative enzyme 0.29 PP_0082 tryptophan synthase alpha chain low > 96
Pseudomonas sp. SVBP6 0.72 COO64_RS21765 YciI family protein 0.29 COO64_RS02270 trpA tryptophan synthase subunit alpha low > 93
Rhodanobacter sp. FW510-T8 0.71 OKGIIK_07030 YciI family protein 0.28 OKGIIK_04850 trpA tryptophan synthase subunit alpha low > 52
Pseudomonas stutzeri RCH2 0.71 Psest_1886 Uncharacterized protein conserved in bacteria 0.31 Psest_0062 tryptophan synthase, alpha subunit 0.19 55
Pseudomonas fluorescens FW300-N2E2 0.70 Pf6N2E2_5623 YciL protein 0.29 Pf6N2E2_4047 Tryptophan synthase alpha chain (EC 4.2.1.20) low > 103
Pantoea sp. MT58 0.70 IAI47_09125 YciI family protein 0.59 IAI47_09165 tryptophan synthase subunit alpha low > 76
Dechlorosoma suillum PS 0.70 Dsui_2887 hypothetical protein 0.32 Dsui_3191 tryptophan synthase, alpha subunit
Erwinia tracheiphila SCR3 0.69 LU632_RS12835 YciI family protein 0.56 LU632_RS12775 trpA tryptophan synthase subunit alpha low > 74
Alteromonas macleodii MIT1002 0.69 MIT1002_01424 YciI-like protein 0.55 MIT1002_01425 Tryptophan synthase alpha chain
Pseudomonas sp. S08-1 0.68 OH686_20785 YciL protein 0.30 OH686_12430 tryptophan synthase, alpha subunit low > 80
Rahnella sp. WP5 0.68 EX31_RS10020 YciI family protein 0.61 EX31_RS09980 tryptophan synthase subunit alpha low > 89
Pseudomonas aeruginosa PA14 0.68 IKLFDK_16275 YciI family protein 0.29 IKLFDK_25380 tryptophan synthase subunit alpha low > 101
Rhodanobacter denitrificans FW104-10B01 0.68 LRK54_RS00280 YciI family protein 0.27 LRK54_RS01680 tryptophan synthase, alpha subunit (EC 4.2.1.20) (from data) low > 59
Marinobacter adhaerens HP15 0.68 HP15_2225 YciI-like protein 0.30 HP15_1826 tryptophan synthase, alpha subunit
Rhodanobacter denitrificans MT42 0.68 LRK55_RS18180 YciI family protein 0.28 LRK55_RS01460 tryptophan synthase subunit alpha low > 63
Rhodanobacter sp000427505 FW510-R12 0.67 LRK53_RS09870 YciI family protein 0.28 LRK53_RS08355 tryptophan synthase subunit alpha low > 60
Erwinia amylovora T8 0.66 OLJFJH_13435 YciI family protein 0.61 OLJFJH_13470 tryptophan synthase subunit alpha low > 58
Xanthomonas campestris pv. campestris strain 8004 0.65 Xcc-8004.2360.1 YciL protein 0.26 Xcc-8004.1967.1 Tryptophan synthase alpha chain (EC 4.2.1.20) low > 74
Methylophilus sp. DMC18 0.64 GFF815 Protein YciI 0.28 GFF657 Tryptophan synthase alpha chain
Dyella japonica UNC79MFTsu3.2 0.63 ABZR86_RS02840 YciI family protein 0.28 ABZR86_RS07995 tryptophan synthase subunit alpha low > 74
Pseudomonas sp. BP01 0.63 JOY50_RS01085 YciI family protein 0.29 JOY50_RS21315 trpA tryptophan synthase subunit alpha low > 84
Lysobacter sp. OAE881 0.57 ABIE51_RS08790 YciI family protein 0.31 ABIE51_RS08265 tryptophan synthase subunit alpha low > 62
Acinetobacter radioresistens SK82 0.50 MPMX26_02640 Protein YciI 0.29 MPMX26_02611 Tryptophan synthase alpha chain
Rhizobium sp. OAE497 0.33 ABIE40_RS18050 YciI-like protein 0.27 ABIE40_RS19340 tryptophan synthase subunit alpha
Sinorhizobium meliloti 1021 0.32 SMc03228 YciI-like protein 0.26 SMc02765 tryptophan synthase subunit alpha low > 103
Mucilaginibacter yixingensis YX-36 DSM 26809 0.30 ABZR88_RS06930 YciI family protein 0.26 ABZR88_RS10660 tryptophan synthase subunit alpha
Agrobacterium fabrum C58 0.28 Atu2649 hypothetical protein 0.25 Atu0019 tryptophan synthase alpha subunit

Not shown: 0 genomes with orthologs for CSW01_08565 only; 48 genomes with orthologs for CSW01_05925 only