Conservation of cofitness between CSW01_08445 and CSW01_03815 in Vibrio cholerae E7946 ATCC 55056

72 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08445 ABC transporter substrate-binding protein 1.0 CSW01_03815 peroxidase 0.97 20
Enterobacter asburiae PDN3 0.41 EX28DRAFT_0974 ABC-type oligopeptide transport system, periplasmic component 0.76 EX28DRAFT_2568 Peroxiredoxin low > 76
Rahnella sp. WP5 0.41 EX31_RS15700 peptide ABC transporter substrate-binding protein SapA 0.77 EX31_RS22080 peroxiredoxin C
Enterobacter sp. TBS_079 0.40 MPMX20_02474 Peptide transport periplasmic protein SapA 0.76 MPMX20_00994 Alkyl hydroperoxide reductase C low > 85
Serratia liquefaciens MT49 0.40 IAI46_13525 peptide ABC transporter substrate-binding protein SapA 0.76 IAI46_04825 peroxiredoxin C
Pectobacterium carotovorum WPP14 0.40 HER17_RS09495 peptide ABC transporter substrate-binding protein SapA 0.74 HER17_RS16005 peroxiredoxin C low > 75
Pantoea sp. MT58 0.40 IAI47_09380 peptide ABC transporter substrate-binding protein SapA 0.30 IAI47_06790 alkyl hydroperoxide reductase subunit C low > 76
Klebsiella michiganensis M5al 0.40 BWI76_RS12420 peptide ABC transporter substrate-binding protein SapA 0.75 BWI76_RS06285 peroxiredoxin low > 92
Klebsiella pneumoniae MKP103 0.40 KDGMDA_19885 peptide ABC transporter substrate-binding protein SapA 0.75 KDGMDA_14380 peroxiredoxin low > 95
Pantoea agglomerans CFBP13505 P0401 0.39 PagCFBP13505_RS06770 peptide ABC transporter substrate-binding protein SapA 0.30 PagCFBP13505_RS00890 alkyl hydroperoxide reductase subunit C low > 74
Dickeya dianthicola 67-19 0.39 HGI48_RS12505 peptide ABC transporter substrate-binding protein SapA 0.76 HGI48_RS05515 peroxiredoxin C
Escherichia coli BL21 0.39 ECD_01271 antimicrobial peptide transport ABC transporter periplasmic binding protein 0.29 ECD_00574 alkyl hydroperoxide reductase, C22 subunit
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_02388 Peptide transport periplasmic protein SapA 0.29 OHPLBJKB_03100 Alkyl hydroperoxide reductase C low > 74
Escherichia coli BW25113 0.39 b1294 sapA predicted antimicrobial peptide transporter subunit (NCBI) 0.29 b0605 ahpC alkyl hydroperoxide reductase, C22 subunit (NCBI) low > 76
Escherichia coli ECRC62 0.39 BNILDI_18295 sapA peptide ABC transporter substrate-binding protein SapA 0.29 BNILDI_21895 ahpC alkyl hydroperoxide reductase subunit C low > 75
Dickeya dadantii 3937 0.39 DDA3937_RS12440 peptide ABC transporter substrate-binding protein SapA 0.76 DDA3937_RS05455 peroxiredoxin C
Escherichia coli ECOR38 0.39 HEPCGN_25740 sapA peptide ABC transporter substrate-binding protein SapA 0.29 HEPCGN_00770 ahpC alkyl hydroperoxide reductase subunit C
Dickeya dianthicola ME23 0.39 DZA65_RS12955 peptide ABC transporter substrate-binding protein SapA 0.76 DZA65_RS05840 peroxiredoxin C low > 75
Erwinia amylovora T8 0.39 OLJFJH_13660 peptide ABC transporter substrate-binding protein SapA 0.75 OLJFJH_18155 peroxiredoxin low > 58
Escherichia coli Nissle 1917 0.39 ECOLIN_RS07825 ABC transporter substrate-binding protein SapA 0.29 ECOLIN_RS03320 alkyl hydroperoxide reductase subunit C
Escherichia fergusonii Becca 0.39 EFB2_02626 Peptide transport periplasmic protein SapA 0.29 EFB2_03486 Alkyl hydroperoxide reductase C low > 86
Escherichia coli ECOR27 0.39 NOLOHH_20145 sapA peptide ABC transporter substrate-binding protein SapA 0.29 NOLOHH_23885 ahpC alkyl hydroperoxide reductase subunit C
Escherichia coli ECRC101 0.39 MCAODC_15810 sapA peptide ABC transporter substrate-binding protein SapA 0.29 MCAODC_26725 ahpC alkyl hydroperoxide reductase subunit C
Escherichia coli ECRC98 0.39 JDDGAC_05005 sapA peptide ABC transporter substrate-binding protein SapA 0.29 JDDGAC_11155 ahpC alkyl hydroperoxide reductase subunit C
Escherichia coli ECRC100 0.39 OKFHMN_02460 sapA peptide ABC transporter substrate-binding protein SapA 0.29 OKFHMN_07510 ahpC alkyl hydroperoxide reductase subunit C
Escherichia coli ECRC99 0.39 KEDOAH_26315 sapA peptide ABC transporter substrate-binding protein SapA 0.29 KEDOAH_20460 ahpC alkyl hydroperoxide reductase subunit C
Escherichia coli ECRC102 0.39 NIAGMN_26630 sapA peptide ABC transporter substrate-binding protein SapA 0.29 NIAGMN_05565 ahpC alkyl hydroperoxide reductase subunit C
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF2688 Peptide transport periplasmic protein SapA 0.75 GFF4302 Alkyl hydroperoxide reductase subunit C-like protein low > 78
Erwinia tracheiphila SCR3 0.38 LU632_RS11570 sapA peptide ABC transporter substrate-binding protein SapA 0.77 LU632_RS18475 peroxiredoxin C low > 73
Erwinia tracheiphila HP pepo 2.2 0.38 IJEDHG_23005 sapA peptide ABC transporter substrate-binding protein SapA 0.77 IJEDHG_16310 ahpC peroxiredoxin low > 61
Shewanella loihica PV-4 0.37 Shew_2498 extracellular solute-binding protein (RefSeq) 0.80 Shew_1516 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (RefSeq)
Shewanella sp. ANA-3 0.37 Shewana3_2650 acetate kinase (RefSeq) 0.81 Shewana3_2541 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen (RefSeq)
Shewanella amazonensis SB2B 0.36 Sama_1235 peptide ABC transporter, periplasmic peptide-binding protein (RefSeq) 0.83 Sama_2094 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.35 MIT1002_01141 Dipeptide-binding protein 0.81 MIT1002_01241 putative peroxiredoxin low > 70
Sinorhizobium meliloti 1021 0.32 SMc00786 periplasmic dipeptide-binding protein 0.23 SM_b20964 Ahp/CTSA family anti-oxidant protein low > 103
Pseudomonas syringae pv. syringae B728a 0.32 Psyr_4238 extracellular solute-binding protein, family 5 0.34 Psyr_2975 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.32 Psyr_4238 extracellular solute-binding protein, family 5 0.34 Psyr_2975 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen low > 86
Pseudomonas sp. DMC3 0.32 GFF5023 Periplasmic dipeptide transport protein 0.71 GFF5096 Alkyl hydroperoxide reductase C low > 89
Pseudomonas sp. RS175 0.32 PFR28_00128 Periplasmic dipeptide transport protein 0.69 PFR28_03357 Alkyl hydroperoxide reductase C low > 88
Kangiella aquimarina DSM 16071 0.32 B158DRAFT_1047 ABC-type dipeptide transport system, periplasmic component 0.80 B158DRAFT_1235 Peroxiredoxin low > 40
Azospirillum sp. SherDot2 0.32 MPMX19_04419 Periplasmic dipeptide transport protein 0.30 MPMX19_05835 Alkyl hydroperoxide reductase C low > 112
Azospirillum brasilense Sp245 0.32 AZOBR_RS29500 peptide ABC transporter substrate-binding protein 0.31 AZOBR_RS20510 alkyl hydroperoxide reductase subunit C low > 97
Pseudomonas segetis P6 0.32 MPMX49_03884 Periplasmic dipeptide transport protein 0.70 MPMX49_01443 Alkyl hydroperoxide reductase C low > 75
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_1121 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) 0.70 Pf1N1B4_746 Alkyl hydroperoxide reductase subunit C-like protein
Paraburkholderia bryophila 376MFSha3.1 0.31 H281DRAFT_05802 dipeptide transport system substrate-binding protein 0.32 H281DRAFT_02890 peroxiredoxin (alkyl hydroperoxide reductase subunit C) low > 103
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_5054 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) 0.70 PfGW456L13_1745 Alkyl hydroperoxide reductase subunit C-like protein low > 87
Pseudomonas aeruginosa MRSN321 0.31 DY961_RS23975 ABC transporter substrate-binding protein 0.70 DY961_RS15370 peroxiredoxin C low > 100
Pseudomonas aeruginosa PA14 0.31 IKLFDK_01580 Di/tripeptide-binding protein 3 0.70 IKLFDK_18015 alkyl hydroperoxide reductase low > 98
Pseudomonas aeruginosa PUPa3 0.31 DQ20_RS56435 ABC transporter substrate-binding protein 0.70 DQ20_RS41780 peroxiredoxin C low > 101
Pseudomonas sp. S08-1 0.31 OH686_08695 Dipeptide ABC transporter, substrate-binding protein DppA 0.29 OH686_18680 peroxiredoxin low > 80
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_07255 peptide ABC transporter substrate-binding protein 0.70 AO356_18305 alkyl hydroperoxide reductase low > 104
Pseudomonas sp. SVBP6 0.31 COO64_RS04105 ABC transporter substrate-binding protein 0.70 COO64_RS16850 peroxiredoxin low > 93
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_3310 Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) 0.71 Pf6N2E2_5586 Alkyl hydroperoxide reductase subunit C-like protein low > 103
Pseudomonas fluorescens FW300-N2E3 0.30 AO353_05370 peptide ABC transporter substrate-binding protein 0.69 AO353_04125 alkyl hydroperoxide reductase low > 101
Agrobacterium fabrum C58 0.30 Atu4113 dipeptide ABC transporter substrate-binding protein 0.22 Atu1480 hypothetical protein low > 89
Paraburkholderia graminis OAS925 0.30 ABIE53_000595 dipeptide transport system substrate-binding protein 0.33 ABIE53_005904 peroxiredoxin low > 113
Variovorax sp. SCN45 0.30 GFF7288 Dipeptide ABC transporter, substrate-binding protein DppA (TC 3.A.1.5.2) 0.29 GFF2826 Alkyl hydroperoxide reductase protein C (EC 1.11.1.15) low > 127
Pseudomonas orientalis W4I3 0.30 QF045_RS07080 ABC transporter substrate-binding protein 0.69 QF045_RS08545 peroxiredoxin low > 93
Pseudomonas putida KT2440 0.30 PP_0885 dipeptide ABC transporter - periplasmic binding protein 0.74 PP_1084 putative peroxiredoxin low > 96
Variovorax sp. OAS795 0.30 ABID97_RS04470 ABC transporter substrate-binding protein 0.29 ABID97_RS10800 alkyl hydroperoxide reductase subunit C low > 91
Pseudomonas sp. BP01 0.30 JOY50_RS10980 ABC transporter substrate-binding protein 0.74 JOY50_RS14915 peroxiredoxin low > 84
Pseudomonas fluorescens SBW25 0.30 PFLU_RS04120 ABC transporter substrate-binding protein 0.69 PFLU_RS05705 peroxiredoxin low > 109
Pseudomonas fluorescens SBW25-INTG 0.30 PFLU_RS04120 ABC transporter substrate-binding protein 0.69 PFLU_RS05705 peroxiredoxin low > 109
Pseudomonas simiae WCS417 0.30 PS417_04075 peptide ABC transporter substrate-binding protein 0.69 PS417_05620 alkyl hydroperoxide reductase low > 88
Rhodospirillum rubrum S1H 0.30 Rru_A2356 extracellular solute-binding protein, family 5 (NCBI) 0.57 Rru_A2897 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (NCBI) 0.48 56
Pseudomonas lactucae CFBP13502 0.30 GEMAOFIL_01020 Periplasmic dipeptide transport protein 0.69 GEMAOFIL_01311 Alkyl hydroperoxide reductase C low > 96
Fusobacterium nucleatum SB010 0.17 HUW76_05125 ABC transporter substrate-binding protein 0.33 HUW76_10130 peroxiredoxin low > 35
Herbaspirillum seropedicae SmR1 0.13 HSERO_RS09195 glutathione ABC transporter substrate-binding protein GsiB 0.33 HSERO_RS21540 alkyl hydroperoxide reductase subunit C low > 78
Castellaniella sp019104865 MT123 0.13 ABCV34_RS13515 glutathione ABC transporter substrate-binding protein GsiB 0.31 ABCV34_RS09920 alkyl hydroperoxide reductase subunit C low > 48
Mucilaginibacter yixingensis YX-36 DSM 26809 0.12 ABZR88_RS16670 ABC transporter substrate-binding protein 0.31 ABZR88_RS20965 peroxiredoxin
Pedobacter sp. GW460-11-11-14-LB5 0.12 CA265_RS01030 ABC transporter substrate-binding protein 0.39 CA265_RS21370 peroxiredoxin low > 88
Rhodopseudomonas palustris CGA009 0.11 TX73_012035 ABC transporter substrate-binding protein 0.24 TX73_012635 peroxiredoxin low > 86
Synechocystis sp000284455 PCC 6803 0.11 SGL_RS08095 peptide ABC transporter substrate-binding protein 0.46 SGL_RS13140 peroxiredoxin low > 52

Not shown: 5 genomes with orthologs for CSW01_08445 only; 37 genomes with orthologs for CSW01_03815 only