Conservation of cofitness between CSW01_00790 and CSW01_03755 in Vibrio cholerae E7946 ATCC 55056

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00790 vitamin B12 transporter BtuB 1.0 CSW01_03755 recombination-associated protein RdgC 0.77 9
Dickeya dadantii 3937 0.32 DDA3937_RS00995 TonB-dependent vitamin B12 receptor BtuB 0.58 DDA3937_RS05405 recombination-associated protein RdgC low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF2352 Outer membrane vitamin B12 receptor BtuB 0.57 GFF4290 DNA recombination-dependent growth factor C low > 78
Escherichia coli Nissle 1917 0.31 ECOLIN_RS22905 TonB-dependent vitamin B12 receptor BtuB 0.57 ECOLIN_RS02385 recombination-associated protein RdgC low > 55
Escherichia coli ECRC99 0.30 KEDOAH_14630 btuB TonB-dependent vitamin B12 receptor BtuB 0.57 KEDOAH_19395 rdgC recombination-associated protein RdgC — —
Escherichia coli ECRC98 0.30 JDDGAC_17155 btuB TonB-dependent vitamin B12 receptor BtuB 0.57 JDDGAC_12225 rdgC recombination-associated protein RdgC low > 86
Escherichia coli ECRC101 0.30 MCAODC_04030 btuB TonB-dependent vitamin B12 receptor BtuB 0.57 MCAODC_27795 rdgC recombination-associated protein RdgC low > 87
Escherichia coli BW25113 0.30 b3966 btuB vitamin B12/cobalamin outer membrane transporter (NCBI) 0.57 b0393 rdgC recombination associated protein (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.30 OHPLBJKB_04084 Vitamin B12 transporter BtuB 0.57 OHPLBJKB_03282 Recombination-associated protein RdgC low > 73
Escherichia coli ECOR27 0.30 NOLOHH_05675 btuB TonB-dependent vitamin B12 receptor BtuB 0.57 NOLOHH_01500 rdgC recombination-associated protein RdgC low > 75
Escherichia coli ECRC100 0.30 OKFHMN_13530 btuB TonB-dependent vitamin B12 receptor BtuB 0.57 OKFHMN_08570 rdgC recombination-associated protein RdgC low > 80
Escherichia coli ECRC62 0.30 BNILDI_05850 btuB TonB-dependent vitamin B12 receptor BtuB 0.57 BNILDI_22915 rdgC recombination-associated protein RdgC low > 75
Escherichia coli ECRC102 0.30 NIAGMN_11280 btuB TonB-dependent vitamin B12 receptor BtuB 0.57 NIAGMN_06625 rdgC recombination-associated protein RdgC — —
Escherichia coli ECOR38 0.30 HEPCGN_12185 btuB TonB-dependent vitamin B12 receptor BtuB 0.57 HEPCGN_07210 rdgC recombination-associated protein RdgC low > 87
Enterobacter asburiae PDN3 0.30 EX28DRAFT_4429 TonB-dependent vitamin B12 receptor 0.56 EX28DRAFT_2579 DNA recombination-dependent growth factor C low > 76
Serratia liquefaciens MT49 0.30 IAI46_24450 TonB-dependent vitamin B12 receptor BtuB 0.58 IAI46_04710 recombination-associated protein RdgC low > 86
Dickeya dianthicola ME23 0.30 DZA65_RS21425 TonB-dependent vitamin B12 receptor BtuB 0.59 DZA65_RS05790 recombination-associated protein RdgC low > 75
Pectobacterium carotovorum WPP14 0.29 HER17_RS00980 TonB-dependent vitamin B12 receptor BtuB 0.55 HER17_RS16060 recombination-associated protein RdgC low > 75
Klebsiella michiganensis M5al 0.29 BWI76_RS00890 vitamin B12/cobalamin outer membrane transporter 0.57 BWI76_RS06205 recombination-associated protein RdgC low > 92
Rahnella sp. WP5 0.29 EX31_RS14135 TonB-dependent vitamin B12 receptor BtuB 0.58 EX31_RS21990 recombination-associated protein RdgC low > 89
Pantoea sp. MT58 0.29 IAI47_00955 TonB-dependent vitamin B12 receptor BtuB 0.58 IAI47_14910 recombination-associated protein RdgC low > 76
Dickeya dianthicola 67-19 0.28 HGI48_RS20380 TonB-dependent vitamin B12 receptor BtuB 0.59 HGI48_RS05465 recombination-associated protein RdgC — —
Escherichia fergusonii Becca 0.28 EFB2_04644 Vitamin B12 transporter BtuB 0.57 EFB2_03663 Recombination-associated protein RdgC low > 86
Enterobacter sp. TBS_079 0.28 MPMX20_04514 Vitamin B12 transporter BtuB 0.56 MPMX20_00982 Recombination-associated protein RdgC low > 85
Lysobacter sp. OAE881 0.21 ABIE51_RS04930 TonB-dependent vitamin B12 receptor 0.31 ABIE51_RS01300 recombination-associated protein RdgC — —
Pseudomonas stutzeri RCH2 0.20 Psest_3016 TonB-dependent vitamin B12 receptor 0.40 Psest_1532 DNA recombination-dependent growth factor C low > 67
Rhodanobacter sp. FW510-T8 0.20 OKGIIK_05465 btuB TonB-dependent vitamin B12 receptor 0.29 OKGIIK_13190 rdgC recombination-associated protein RdgC — —
Dyella japonica UNC79MFTsu3.2 0.20 ABZR86_RS10930 TonB-dependent vitamin B12 receptor 0.31 ABZR86_RS16505 recombination-associated protein RdgC — —
Pseudomonas aeruginosa PA14 0.19 IKLFDK_06025 TonB-dependent vitamin B12 receptor 0.44 IKLFDK_16705 recombination-associated protein RdgC low > 101
Xanthomonas campestris pv. campestris strain 8004 0.19 Xcc-8004.1388.1 Outer membrane vitamin B12 receptor BtuB 0.30 Xcc-8004.5210.1 DNA recombination-dependent growth factor C — —
Rhodanobacter sp000427505 FW510-R12 0.18 LRK53_RS00695 TonB-dependent vitamin B12 receptor 0.30 LRK53_RS03480 recombination-associated protein RdgC — —
Rhodanobacter denitrificans FW104-10B01 0.17 LRK54_RS07830 TonB-dependent vitamin B12 receptor 0.30 LRK54_RS10690 recombination-associated protein RdgC — —
Variovorax sp. SCN45 0.17 GFF450 Outer membrane vitamin B12 receptor BtuB 0.24 GFF5080 DNA recombination-dependent growth factor RdgC low > 127
Rhodanobacter denitrificans MT42 0.17 LRK55_RS07560 TonB-dependent vitamin B12 receptor 0.30 LRK55_RS10330 recombination-associated protein RdgC — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.17 GFF3976 Outer membrane vitamin B12 receptor BtuB 0.27 GFF5355 DNA recombination-dependent growth factor C — —
Paraburkholderia graminis OAS925 0.16 ABIE53_001246 vitamin B12 transporter 0.29 ABIE53_001446 recombination associated protein RdgC low > 113
Burkholderia phytofirmans PsJN 0.16 BPHYT_RS04850 TonB-denpendent receptor 0.29 BPHYT_RS06215 recombinase RdgC low > 109
Pseudomonas sp. DMC3 0.16 GFF3838 Vitamin B12 transporter BtuB 0.41 GFF2574 Recombination-associated protein RdgC low > 89
Paraburkholderia bryophila 376MFSha3.1 0.16 H281DRAFT_00136 vitamin B12 transporter 0.29 H281DRAFT_00319 recombination associated protein RdgC low > 103
Pseudomonas simiae WCS417 0.16 PS417_25210 TonB-dependent receptor 0.40 PS417_09245 recombinase RdgC low > 88
Ralstonia sp. UNC404CL21Col 0.16 ABZR87_RS00095 TonB-dependent receptor 0.30 ABZR87_RS18475 recombination-associated protein RdgC low > 80
Pseudomonas fluorescens GW456-L13 0.16 PfGW456L13_1324 Outer membrane vitamin B12 receptor BtuB 0.41 PfGW456L13_4216 DNA recombination-dependent growth factor C low > 87
Pseudomonas sp. SVBP6 0.16 COO64_RS15835 TonB-dependent receptor domain-containing protein 0.42 COO64_RS07115 rdgC recombination-associated protein RdgC low > 93
Pseudomonas fluorescens FW300-N1B4 0.15 Pf1N1B4_2660 Outer membrane vitamin B12 receptor BtuB 0.41 Pf1N1B4_3731 DNA recombination-dependent growth factor C — —
Ralstonia solanacearum IBSBF1503 0.15 RALBFv3_RS04495 TonB-dependent receptor 0.30 RALBFv3_RS12420 recombination-associated protein RdgC low > 76
Ralstonia solanacearum UW163 0.15 UW163_RS09175 TonB-dependent receptor 0.30 UW163_RS01150 recombination-associated protein RdgC — —
Paraburkholderia sabiae LMG 24235 0.15 QEN71_RS25145 TonB-dependent receptor 0.29 QEN71_RS20685 recombination-associated protein RdgC low > 153
Pseudomonas fluorescens SBW25 0.15 PFLU_RS26850 TonB-dependent receptor 0.40 PFLU_RS09255 recombination-associated protein RdgC low > 109
Pseudomonas fluorescens SBW25-INTG 0.15 PFLU_RS26850 TonB-dependent receptor 0.40 PFLU_RS09255 recombination-associated protein RdgC low > 109
Marinobacter adhaerens HP15 0.15 HP15_3953 outer membrane receptor for transport of vitamin B 0.40 HP15_1221 recombination-associated protein rdgC low > 73
Pseudomonas putida KT2440 0.15 PP_0525 TonB-dependent receptor, B12 family 0.43 PP_1702 Recombination-associated protein RdgC low > 96
Ralstonia solanacearum PSI07 0.15 RPSI07_RS12875 TonB-dependent receptor 0.28 RPSI07_RS20910 recombination-associated protein RdgC low > 81
Pseudomonas fluorescens FW300-N2E3 0.15 AO353_06660 TonB-dependent receptor 0.42 AO353_02515 recombination-associated protein RdgC low > 101
Pseudomonas sp. S08-1 0.15 OH686_15755 Outer membrane vitamin B12 receptor BtuB 0.42 OH686_19640 DNA recombination-dependent growth factor RdgC low > 80
Pseudomonas sp. RS175 0.15 PFR28_03938 Vitamin B12 transporter BtuB 0.42 PFR28_03182 Recombination-associated protein RdgC low > 88
Ralstonia solanacearum GMI1000 0.15 RS_RS12050 TonB-dependent receptor 0.29 RS_RS03100 recombination-associated protein RdgC low > 80
Pseudomonas fluorescens FW300-N2E2 0.15 Pf6N2E2_4930 Outer membrane vitamin B12 receptor BtuB 0.42 Pf6N2E2_5768 DNA recombination-dependent growth factor C low > 103
Pseudomonas sp. BP01 0.14 JOY50_RS20070 TonB-dependent receptor domain-containing protein 0.43 JOY50_RS28065 rdgC recombination-associated protein RdgC low > 84
Cupriavidus basilensis FW507-4G11 0.14 RR42_RS16140 TonB-dependent receptor 0.28 RR42_RS17820 recombinase RdgC low > 128
Pseudomonas fluorescens FW300-N2C3 0.14 AO356_14985 TonB-dependent receptor 0.43 AO356_19265 recombination-associated protein RdgC low > 104
Castellaniella sp019104865 MT123 0.14 ABCV34_RS14545 TonB-dependent receptor 0.33 ABCV34_RS04480 recombination-associated protein RdgC — —
Alteromonas macleodii MIT1002 0.13 MIT1002_00716 Outer membrane cobalamin translocator 0.37 MIT1002_00749 Recombination-associated protein RdgC low > 70

Not shown: 13 genomes with orthologs for CSW01_00790 only; 12 genomes with orthologs for CSW01_03755 only