| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_13390 | | phosphoenolpyruvate carboxylase | 1.0 | CSW01_01355 | | UDP-glucose 4-epimerase | 0.45 | 13 |
| Dickeya dianthicola 67-19 | 0.66 | HGI48_RS00850 | | phosphoenolpyruvate carboxylase | 0.48 | HGI48_RS03515 | | NAD-dependent epimerase/dehydratase family protein | low | > 71 |
| Dickeya dadantii 3937 | 0.66 | DDA3937_RS20360 | | phosphoenolpyruvate carboxylase | 0.48 | DDA3937_RS03415 | | NAD-dependent epimerase/dehydratase family protein | low | > 74 |
| Serratia liquefaciens MT49 | 0.65 | IAI46_24525 | | phosphoenolpyruvate carboxylase | 0.13 | IAI46_15590 | | NAD-dependent epimerase/dehydratase family protein | low | > 87 |
| Dickeya dianthicola ME23 | 0.65 | DZA65_RS00895 | | phosphoenolpyruvate carboxylase | 0.48 | DZA65_RS03630 | | NAD-dependent epimerase/dehydratase family protein | low | > 75 |
| Klebsiella michiganensis M5al | 0.64 | BWI76_RS00835 | | phosphoenolpyruvate carboxylase | 0.09 | BWI76_RS09540 | | hypothetical protein | low | > 92 |
| Escherichia coli ECRC100 | 0.64 | OKFHMN_13595 | ppc | phosphoenolpyruvate carboxylase | 0.16 | OKFHMN_24400 | | N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase | low | > 79 |
| Escherichia coli ECRC99 | 0.64 | KEDOAH_14565 | ppc | phosphoenolpyruvate carboxylase | 0.16 | KEDOAH_03750 | | N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase | — | — |
| Escherichia coli ECRC101 | 0.64 | MCAODC_04095 | ppc | phosphoenolpyruvate carboxylase | 0.16 | MCAODC_20540 | | N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase | low | > 87 |
| Escherichia coli ECRC98 | 0.64 | JDDGAC_17220 | ppc | phosphoenolpyruvate carboxylase | 0.16 | JDDGAC_28510 | | N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase | low | > 87 |
| Escherichia coli ECRC102 | 0.64 | NIAGMN_11345 | ppc | phosphoenolpyruvate carboxylase | 0.16 | NIAGMN_22345 | | N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase | low | > 80 |
| Enterobacter asburiae PDN3 | 0.63 | EX28DRAFT_4418 | | Phosphoenolpyruvate carboxylase, type 1 (EC 4.1.1.31) | 0.30 | EX28DRAFT_0516 | | Nucleoside-diphosphate-sugar epimerases | low | > 76 |
| Escherichia coli ECOR27 | 0.63 | NOLOHH_05740 | ppc | phosphoenolpyruvate carboxylase | 0.17 | NOLOHH_15730 | | N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase | low | > 76 |
| Enterobacter sp. TBS_079 | 0.63 | MPMX20_04524 | | Phosphoenolpyruvate carboxylase | 0.10 | MPMX20_01529 | | 2-alkyl-3-oxoalkanoate reductase | low | > 85 |
| Rahnella sp. WP5 | 0.63 | EX31_RS14200 | | phosphoenolpyruvate carboxylase | 0.10 | EX31_RS18615 | | NAD(P)-dependent oxidoreductase | low | > 89 |
| Shewanella oneidensis MR-1 | 0.56 | SO0274 | ppc | phosphoenolpyruvate carboxylase (NCBI ptt file) | 0.44 | SO3173 | | UDP-galactose 4-epimerase, putative (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.55 | Shewana3_3906 | | phosphoenolpyruvate carboxylase (RefSeq) | 0.09 | Shewana3_2712 | | 3-beta hydroxysteroid dehydrogenase/isomerase (RefSeq) | low | > 73 |
| Shewanella amazonensis SB2B | 0.54 | Sama_0254 | | phosphoenolpyruvate carboxylase (RefSeq) | 0.26 | Sama_2249 | | hypothetical protein (RefSeq) | low | > 62 |
| Shewanella loihica PV-4 | 0.53 | Shew_0200 | | phosphoenolpyruvate carboxylase (RefSeq) | 0.09 | Shew_1716 | | 3-beta hydroxysteroid dehydrogenase/isomerase (RefSeq) | low | > 60 |
| Marinobacter adhaerens HP15 | 0.49 | HP15_795 | | phosphoenolpyruvate carboxylase | 0.27 | HP15_2386 | | UDP-glucose 4-epimerase | low | > 73 |
| Pseudomonas aeruginosa PA14 | 0.49 | IKLFDK_18825 | | phosphoenolpyruvate carboxylase | 0.50 | IKLFDK_16015 | | NAD-dependent dehydratase | low | > 98 |
| Pseudomonas aeruginosa PUPa3 | 0.49 | DQ20_RS42585 | ppc;go_function=phosphoenolpyruvate | phosphoenolpyruvate carboxylase | 0.46 | DQ20_RS34370 | | SDR family oxidoreductase | low | > 101 |
| Pseudomonas aeruginosa MRSN321 | 0.49 | DY961_RS14540 | ppc;go_function=phosphoenolpyruvate | phosphoenolpyruvate carboxylase | 0.46 | DY961_RS01185 | | SDR family oxidoreductase | — | — |
| Pseudomonas segetis P6 | 0.49 | MPMX49_01618 | | Phosphoenolpyruvate carboxylase | 0.49 | MPMX49_02886 | | N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans, octacis-undecaprenol 4-epimerase | low | > 75 |
| Pseudomonas stutzeri RCH2 | 0.49 | Psest_1557 | | Phosphoenolpyruvate carboxylase | 0.44 | Psest_1823 | | Nucleoside-diphosphate-sugar epimerases | low | > 67 |
| Pseudomonas orientalis W4I3 | 0.49 | QF045_RS08910 | | phosphoenolpyruvate carboxylase | 0.45 | QF045_RS10945 | | NAD-dependent epimerase/dehydratase family protein | low | > 93 |
| Pseudomonas sp. SVBP6 | 0.49 | COO64_RS19495 | ppc | phosphoenolpyruvate carboxylase | 0.45 | COO64_RS06670 | | SDR family oxidoreductase | low | > 93 |
| Pseudomonas fluorescens FW300-N1B4 | 0.49 | Pf1N1B4_3051 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | 0.45 | Pf1N1B4_339 | | UDP-glucose 4-epimerase (EC 5.1.3.2) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.49 | AO353_16310 | | phosphoenolpyruvate carboxylase | 0.48 | AO353_01980 | | NAD-dependent dehydratase | low | > 101 |
| Pseudomonas fluorescens FW300-N2C3 | 0.49 | AO356_06185 | | phosphoenolpyruvate carboxylase | 0.36 | AO356_03355 | | hypothetical protein | low | > 104 |
| Pseudomonas lactucae CFBP13502 | 0.49 | GEMAOFIL_01382 | | Phosphoenolpyruvate carboxylase | 0.46 | GEMAOFIL_01770 | | N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans, octacis-undecaprenol 4-epimerase | low | > 96 |
| Pseudomonas sp. DMC3 | 0.48 | GFF2023 | | Phosphoenolpyruvate carboxylase | 0.46 | GFF4665 | | N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,o ctacis-undecaprenol 4-epimerase | low | > 89 |
| Pseudomonas putida KT2440 | 0.48 | PP_1505 | | Phosphoenolpyruvate carboxylase | 0.47 | PP_1803 | | UDP-sugar epimerase | low | > 96 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.48 | Psyr_1318 | | Phosphoenolpyruvate carboxylase | 0.42 | Psyr_3638 | | UDP-glucose 4-epimerase, putative | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.48 | Psyr_1318 | | Phosphoenolpyruvate carboxylase | 0.42 | Psyr_3638 | | UDP-glucose 4-epimerase, putative | low | > 86 |
| Pseudomonas sp. S08-1 | 0.48 | OH686_06795 | | Phosphoenolpyruvate carboxylase | 0.41 | OH686_20905 | | UDP-glucose 4-epimerase | low | > 80 |
| Pseudomonas sp. BP01 | 0.47 | JOY50_RS26030 | ppc | phosphoenolpyruvate carboxylase | 0.36 | JOY50_RS16060 | | SDR family oxidoreductase | low | > 84 |
| Azospirillum sp. SherDot2 | 0.25 | MPMX19_06050 | | Phosphoenolpyruvate carboxylase | 0.38 | MPMX19_01806 | | N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans, octacis-undecaprenol 4-epimerase | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.23 | GFF115 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | 0.42 | GFF1863 | | UDP-glucose 4-epimerase (EC 5.1.3.2) | low | > 90 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.23 | Xcc-8004.4314.1 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | 0.11 | Xcc-8004.290.1 | | NAD(P)H steroid dehydrogenase-like protein in alkane synthesis cluster | low | > 74 |
| Herbaspirillum seropedicae SmR1 | 0.23 | HSERO_RS14670 | | phosphoenolpyruvate carboxylase | 0.48 | HSERO_RS02375 | | NAD-dependent dehydratase | low | > 78 |
| Acidovorax sp. GW101-3H11 | 0.23 | Ac3H11_3553 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | 0.09 | Ac3H11_1071 | | Dihydroflavonol-4-reductase (EC 1.1.1.219) | low | > 79 |
| Rhodanobacter sp. FW510-T8 | 0.22 | OKGIIK_11820 | ppc | phosphoenolpyruvate carboxylase | 0.10 | OKGIIK_08255 | wcaG | Nucleoside-diphosphate-sugar epimerase | low | > 53 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.22 | H281DRAFT_00197 | | Phosphoenolpyruvate carboxylase, type 1 | 0.34 | H281DRAFT_04849 | | UDP-glucose 4-epimerase | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.22 | ABIE53_001314 | | phosphoenolpyruvate carboxylase | 0.33 | ABIE53_001161 | | nucleoside-diphosphate-sugar epimerase | low | > 113 |
| Burkholderia phytofirmans PsJN | 0.22 | BPHYT_RS05225 | | phosphoenolpyruvate carboxylase | 0.38 | BPHYT_RS04375 | | epimerase | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.22 | Ga0059261_2719 | | Phosphoenolpyruvate carboxylase, type 1 (EC 4.1.1.31) | 0.10 | Ga0059261_3511 | | Nucleoside-diphosphate-sugar epimerases | — | — |
| Lysobacter sp. OAE881 | 0.21 | ABIE51_RS18965 | | phosphoenolpyruvate carboxylase | 0.09 | ABIE51_RS00235 | | 2-alkyl-3-oxoalkanoate reductase | low | > 62 |
| Paraburkholderia sabiae LMG 24235 | 0.21 | QEN71_RS24955 | | phosphoenolpyruvate carboxylase | 0.32 | QEN71_RS25600 | | SDR family oxidoreductase | low | > 153 |
| Rhodanobacter denitrificans FW104-10B01 | 0.21 | LRK54_RS12075 | | phosphoenolpyruvate carboxylase | 0.10 | LRK54_RS16530 | | aldehyde reductase | low | > 59 |
| Castellaniella sp019104865 MT123 | 0.21 | ABCV34_RS14805 | | phosphoenolpyruvate carboxylase | 0.32 | ABCV34_RS13025 | | NAD-dependent epimerase/dehydratase family protein | low | > 48 |
| Rhodanobacter denitrificans MT42 | 0.21 | LRK55_RS11810 | | phosphoenolpyruvate carboxylase | 0.10 | LRK55_RS16255 | | aldehyde reductase | low | > 63 |
| Rhodanobacter sp000427505 FW510-R12 | 0.21 | LRK53_RS16490 | | phosphoenolpyruvate carboxylase | 0.11 | LRK53_RS12390 | | aldehyde reductase | low | > 59 |
| Sphingobium sp. HT1-2 | 0.21 | GFF5056 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | 0.16 | GFF1116 | | NAD-dependent epimerase/dehydratase | low | > 95 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.12 | Echvi_3727 | | Phosphoenolpyruvate carboxylase | 0.12 | Echvi_4391 | | Nucleoside-diphosphate-sugar epimerases | low | > 79 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.10 | CA265_RS21350 | | phosphoenolpyruvate carboxylase | 0.14 | CA265_RS19215 | | nucleoside-diphosphate-sugar epimerase | 0.59 | 76 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.10 | ABZR88_RS09465 | | phosphoenolpyruvate carboxylase | 0.11 | ABZR88_RS03025 | | NAD(P)-dependent oxidoreductase | — | — |
Not shown: 45 genomes with orthologs for CSW01_13390 only; 11 genomes with orthologs for CSW01_01355 only