Conservation of cofitness between CSW01_07160 and CSW01_00850 in Vibrio cholerae E7946 ATCC 55056

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07160 spermidine/putrescine ABC transporter ATP-binding protein 1.0 CSW01_00850 multidrug resistance protein 0.58 3
Escherichia coli ECRC100 0.75 OKFHMN_00625 potA spermidine/putrescine ABC transporter ATP-binding protein PotA 0.24 OKFHMN_21970 acrD multidrug efflux RND transporter permease AcrD low > 80
Escherichia coli ECRC101 0.75 MCAODC_22460 potA spermidine/putrescine ABC transporter ATP-binding protein PotA 0.24 MCAODC_12500 acrD multidrug efflux RND transporter permease AcrD low > 87
Escherichia coli ECRC102 0.75 NIAGMN_24750 potA spermidine/putrescine ABC transporter ATP-binding protein PotA 0.24 NIAGMN_19740 acrD multidrug efflux RND transporter permease AcrD — —
Escherichia coli ECRC98 0.75 JDDGAC_06740 potA spermidine/putrescine ABC transporter ATP-binding protein PotA 0.24 JDDGAC_25915 acrD multidrug efflux RND transporter permease AcrD low > 86
Escherichia coli ECOR27 0.75 NOLOHH_20935 potA spermidine/putrescine ABC transporter ATP-binding protein PotA 0.24 NOLOHH_13650 acrD multidrug efflux RND transporter permease AcrD low > 75
Escherichia coli BW25113 0.75 b1126 potA putrescine/spermidine ABC transporter ATPase protein (NCBI) 0.24 b2470 acrD aminoglycoside/multidrug efflux system (NCBI) low > 76
Escherichia coli BL21 0.75 ECD_01124 spermidine/putrescine ABC transporter ATPase 0.24 ECD_02361 aminoglycoside/multidrug efflux system low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_02542 Spermidine/putrescine import ATP-binding protein PotA 0.24 OHPLBJKB_01261 Multidrug efflux pump subunit AcrB low > 73
Escherichia coli ECRC62 0.75 BNILDI_19100 potA spermidine/putrescine ABC transporter ATP-binding protein PotA 0.24 BNILDI_12460 acrD multidrug efflux RND transporter permease AcrD low > 75
Escherichia fergusonii Becca 0.75 EFB2_02849 Spermidine/putrescine import ATP-binding protein PotA 0.24 EFB2_01418 Multidrug efflux pump subunit AcrB low > 86
Escherichia coli ECOR38 0.75 HEPCGN_24075 potA spermidine/putrescine ABC transporter ATP-binding protein PotA 0.24 HEPCGN_21140 acrD multidrug efflux RND transporter permease AcrD low > 87
Escherichia coli ECRC99 0.75 KEDOAH_24710 potA spermidine/putrescine ABC transporter ATP-binding protein PotA 0.24 KEDOAH_06250 acrD multidrug efflux RND transporter permease AcrD — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF3410 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) 0.24 GFF4246 RND efflux system, inner membrane transporter CmeB low > 78
Escherichia coli Nissle 1917 0.75 ECOLIN_RS06485 spermidine/putrescine ABC transporter ATP-binding protein PotA 0.24 ECOLIN_RS14090 multidrug efflux RND transporter permease AcrD low > 55
Klebsiella michiganensis M5al 0.74 BWI76_RS11255 putrescine/spermidine ABC transporter ATP-binding protein 0.24 BWI76_RS06775 multidrug efflux RND transporter permease subunit low > 92
Enterobacter sp. TBS_079 0.72 MPMX20_01807 Spermidine/putrescine import ATP-binding protein PotA 0.24 MPMX20_01064 Multidrug efflux pump subunit AcrB low > 85
Pectobacterium carotovorum WPP14 0.72 HER17_RS11660 spermidine/putrescine ABC transporter ATP-binding protein PotA 0.23 HER17_RS01560 multidrug efflux RND transporter permease AcrD low > 75
Enterobacter asburiae PDN3 0.72 EX28DRAFT_1804 spermidine/putrescine ABC transporter ATP-binding subunit 0.24 EX28DRAFT_2496 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family low > 76
Marinobacter adhaerens HP15 0.55 HP15_4062 spermidine/putrescine ABC transporter, ATP-binding protein 0.46 HP15_3262 multidrug resistance protein low > 73
Desulfovibrio vulgaris Hildenborough JW710 0.55 DVU0098 potA polyamine ABC transporter, ATP-binding protein (TIGR) 0.25 DVU0061 multidrug resistance protein, putative (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.52 DvMF_1960 potA putrescine/spermidine ABC transporter ATPase protein (RefSeq) 0.24 DvMF_2163 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family (RefSeq) low > 51
Pseudomonas aeruginosa PA14 0.40 IKLFDK_18415 Spermidine/putrescine import ATP-binding protein PotA 0.46 IKLFDK_02225 multidrug efflux RND transporter permease subunit MexW low > 101
Caulobacter crescentus NA1000 Δfur 0.39 CCNA_03235 spermidine/putrescine transport ATP-binding protein potA 0.23 CCNA_00850 cation/multidrug efflux pump acrB2 low > 67
Caulobacter crescentus NA1000 0.39 CCNA_03235 spermidine/putrescine transport ATP-binding protein potA 0.23 CCNA_00850 cation/multidrug efflux pump acrB2 low > 66
Rhodopseudomonas palustris CGA009 0.39 TX73_021565 ABC transporter ATP-binding protein 0.48 TX73_019545 MexW/MexI family multidrug efflux RND transporter permease subunit low > 86
Rhodospirillum rubrum S1H 0.39 Rru_A1017 Spermidine/putrescine ABC transporter ATP-binding subunit (NCBI) 0.49 Rru_A3699 Acriflavin resistance protein (NCBI) low > 58
Xanthobacter sp. DMC5 0.38 GFF45 Spermidine/putrescine import ATP-binding protein PotA 0.40 GFF2738 Efflux pump membrane transporter BepE — —
Serratia liquefaciens MT49 0.38 IAI46_08375 putrescine ABC transporter ATP-binding subunit PotG 0.23 IAI46_18690 multidrug efflux RND transporter permease AcrD low > 86
Paraburkholderia sabiae LMG 24235 0.38 QEN71_RS36445 ABC transporter ATP-binding protein 0.43 QEN71_RS26025 efflux RND transporter permease subunit low > 153
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_04275 polyamine ABC transporter ATP-binding protein 0.46 AO353_04000 acriflavine resistance protein B low > 101
Pseudomonas fluorescens GW456-L13 0.38 PfGW456L13_4763 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) 0.45 PfGW456L13_1771 RND multidrug efflux transporter; Acriflavin resistance protein low > 87
Rahnella sp. WP5 0.38 EX31_RS09625 putrescine ABC transporter ATP-binding subunit PotG 0.23 EX31_RS22470 multidrug efflux RND transporter permease subunit low > 89
Pseudomonas simiae WCS417 0.38 PS417_05935 polyamine ABC transporter ATP-binding protein 0.47 PS417_22755 acriflavine resistance protein B low > 88
Pseudomonas fluorescens FW300-N1B4 0.38 Pf1N1B4_3027 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) 0.47 Pf1N1B4_720 RND multidrug efflux transporter; Acriflavin resistance protein low > 87
Pseudomonas sp. S08-1 0.38 OH686_06910 ABC transporter ATP-binding protein YdcT 0.47 OH686_17360 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) low > 80
Pseudomonas fluorescens SBW25 0.38 PFLU_RS05995 ABC transporter ATP-binding protein 0.47 PFLU_RS24405 multidrug efflux RND transporter permease subunit low > 109
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS05995 ABC transporter ATP-binding protein 0.47 PFLU_RS24405 multidrug efflux RND transporter permease subunit low > 109
Bosea sp. OAE506 0.38 ABIE41_RS02370 ABC transporter ATP-binding protein 0.23 ABIE41_RS01595 efflux RND transporter permease subunit low > 77
Pseudomonas sp. SVBP6 0.38 COO64_RS05020 ABC transporter ATP-binding protein 0.46 COO64_RS12055 multidrug efflux RND transporter permease subunit low > 93
Azospirillum brasilense Sp245 0.37 AZOBR_RS08840 ABC transporter ATP-binding protein 0.49 AZOBR_RS31320 acriflavine resistance protein B low > 97
Azospirillum sp. SherDot2 0.37 MPMX19_04509 Spermidine/putrescine import ATP-binding protein PotA 0.48 MPMX19_05610 Efflux pump membrane transporter BepE low > 112
Castellaniella sp019104865 MT123 0.37 ABCV34_RS02365 polyamine ABC transporter ATP-binding protein 0.20 ABCV34_RS14620 multidrug efflux RND transporter permease subunit low > 48
Ralstonia sp. UNC404CL21Col 0.37 ABZR87_RS22460 ABC transporter ATP-binding protein 0.22 ABZR87_RS09795 efflux RND transporter permease subunit low > 80
Magnetospirillum magneticum AMB-1 0.37 AMB_RS13205 polyamine ABC transporter ATP-binding protein 0.48 AMB_RS17260 acriflavine resistance protein B low > 64
Pseudomonas sp. RS175 0.37 PFR28_00346 Spermidine/putrescine import ATP-binding protein PotA 0.47 PFR28_03330 Multidrug efflux pump subunit AcrB low > 88
Pseudomonas sp. BP01 0.37 JOY50_RS11770 ABC transporter ATP-binding protein 0.47 JOY50_RS14955 multidrug efflux RND transporter permease subunit low > 84
Pseudomonas putida KT2440 0.37 PP_1484 predicted polyamine ABC transporter, ATP-binding protein 0.46 PP_0906 putative Multidrug efflux RND transporter low > 96
Pseudomonas fluorescens FW300-N2C3 0.37 AO356_06300 polyamine ABC transporter ATP-binding protein 0.47 AO356_18440 acriflavine resistance protein B low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.37 Psyr_4615 Spermidine/putrescine ABC transporter ATP-binding subunit 0.23 Psyr_2968 Hydrophobe/amphiphile efflux-1 HAE1 low > 86
Pseudomonas syringae pv. syringae B728a 0.37 Psyr_4615 Spermidine/putrescine ABC transporter ATP-binding subunit 0.23 Psyr_2968 Hydrophobe/amphiphile efflux-1 HAE1 low > 86
Erwinia amylovora T8 0.37 OLJFJH_16305 putrescine ABC transporter ATP-binding subunit PotG 0.22 OLJFJH_17855 multidrug efflux RND transporter permease subunit AcrB low > 58
Hydrogenophaga sp. GW460-11-11-14-LB1 0.36 GFF282 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) 0.34 GFF4261 RND multidrug efflux transporter; Acriflavin resistance protein low > 90
Pantoea sp. MT58 0.36 IAI47_13040 putrescine ABC transporter ATP-binding subunit PotG 0.23 IAI47_05310 multidrug efflux RND transporter permease AcrD low > 76
Dickeya dadantii 3937 0.36 DDA3937_RS09465 putrescine ABC transporter ATP-binding subunit PotG 0.23 DDA3937_RS05735 multidrug efflux RND transporter permease subunit low > 74
Shewanella sp. ANA-3 0.36 Shewana3_3096 spermidine/putrescine ABC transporter ATPase subunit (RefSeq) 0.72 Shewana3_0371 acriflavin resistance protein (RefSeq) low > 73
Pseudomonas sp. DMC3 0.36 GFF285 Spermidine/putrescine import ATP-binding protein PotA 0.46 GFF5069 Multidrug efflux pump subunit AcrB low > 89
Acidovorax sp. GW101-3H11 0.36 Ac3H11_4180 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) 0.34 Ac3H11_482 RND multidrug efflux transporter; Acriflavin resistance protein low > 79
Variovorax sp. SCN45 0.36 GFF5594 Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) 0.45 GFF3509 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) => MexI of MexHI-OpmD system low > 127
Dickeya dianthicola 67-19 0.36 HGI48_RS09485 putrescine ABC transporter ATP-binding subunit PotG 0.22 HGI48_RS05790 multidrug efflux RND transporter permease subunit low > 71
Pseudomonas stutzeri RCH2 0.36 Psest_4282 spermidine/putrescine ABC transporter ATP-binding subunit 0.45 Psest_1153 Cation/multidrug efflux pump low > 67
Dickeya dianthicola ME23 0.36 DZA65_RS09795 putrescine ABC transporter ATP-binding subunit PotG 0.22 DZA65_RS06115 multidrug efflux RND transporter permease subunit low > 75
Shewanella amazonensis SB2B 0.35 Sama_2641 polyamine ABC transporter, ATP-binding protein (RefSeq) 0.71 Sama_3269 putative multidrug resistance protein (RefSeq) low > 62
Herbaspirillum seropedicae SmR1 0.35 HSERO_RS03005 ABC transporter ATP-binding protein 0.23 HSERO_RS23055 multidrug transporter low > 78
Ralstonia solanacearum UW163 0.33 UW163_RS14545 ABC transporter ATP-binding protein 0.22 UW163_RS04135 multidrug efflux RND transporter permease subunit — —
Ralstonia solanacearum IBSBF1503 0.33 RALBFv3_RS01235 ABC transporter ATP-binding protein 0.22 RALBFv3_RS09445 multidrug efflux RND transporter permease subunit — —

Not shown: 9 genomes with orthologs for CSW01_07160 only; 20 genomes with orthologs for CSW01_00850 only