Conservation of cofitness between CSW01_13685 and CSW01_00650 in Vibrio cholerae E7946 ATCC 55056

73 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_13685 xanthine permease XanP 1.0 CSW01_00650 tyrosine recombinase XerC 0.40 15
Dickeya dadantii 3937 0.66 DDA3937_RS00165 uracil-xanthine permease 0.56 DDA3937_RS19890 tyrosine recombinase XerC — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF351 Xanthine permease 0.55 GFF239 Tyrosine recombinase XerC — —
Serratia liquefaciens MT49 0.65 IAI46_24915 NCS2 family protein 0.55 IAI46_00725 tyrosine recombinase XerC low > 87
Pantoea sp. MT58 0.65 IAI47_00495 uracil-xanthine permease 0.53 IAI47_18400 tyrosine recombinase XerC low > 76
Klebsiella michiganensis M5al 0.65 BWI76_RS27525 xanthine permease XanP 0.55 BWI76_RS01210 tyrosine recombinase XerC low > 92
Erwinia tracheiphila HP pepo 2.2 0.65 IJEDHG_08340 pbuX xanthine permease XanP 0.53 IJEDHG_08780 xerC tyrosine recombinase XerC — —
Enterobacter asburiae PDN3 0.65 EX28DRAFT_3903 uracil-xanthine permease 0.54 EX28DRAFT_4480 tyrosine recombinase XerC — —
Enterobacter sp. TBS_079 0.65 MPMX20_00082 Xanthine permease XanP 0.52 MPMX20_04465 Tyrosine recombinase XerC low > 85
Erwinia tracheiphila SCR3 0.65 LU632_RS22185 uracil-xanthine permease family protein 0.53 LU632_RS24135 xerC tyrosine recombinase XerC — —
Pantoea agglomerans CFBP13505 P0401 0.65 PagCFBP13505_RS18850 uracil-xanthine permease 0.53 PagCFBP13505_RS15380 tyrosine recombinase XerC — —
Rahnella sp. WP5 0.65 EX31_RS15835 uracil-xanthine permease 0.56 EX31_RS15165 tyrosine recombinase XerC low > 89
Klebsiella pneumoniae MKP103 0.65 KDGMDA_08200 xanthine permease XanP 0.53 KDGMDA_09700 tyrosine recombinase XerC low > 95
Erwinia amylovora T8 0.65 OLJFJH_05545 xanthine permease XanP 0.54 OLJFJH_06415 tyrosine recombinase XerC low > 58
Escherichia coli ECRC62 0.64 BNILDI_04105 xanP xanthine/proton symporter XanP 0.54 BNILDI_04985 xerC tyrosine recombinase XerC low > 75
Escherichia coli Nissle 1917 0.64 ECOLIN_RS20810 xanthine/proton symporter XanP 0.54 ECOLIN_RS21875 tyrosine recombinase XerC low > 55
Escherichia coli ECRC98 0.64 JDDGAC_19155 xanP xanthine/proton symporter XanP 0.55 JDDGAC_18045 xerC tyrosine recombinase XerC — —
Pectobacterium carotovorum WPP14 0.64 HER17_RS21400 uracil-xanthine permease family protein 0.54 HER17_RS01350 tyrosine recombinase XerC low > 75
Escherichia coli ECRC101 0.64 MCAODC_06040 xanP xanthine/proton symporter XanP 0.55 MCAODC_04925 xerC tyrosine recombinase XerC — —
Escherichia coli BW25113 0.64 b3654 yicE predicted transporter (NCBI) 0.54 b3811 xerC site-specific tyrosine recombinase XerC (NCBI) low > 76
Escherichia coli ECOR27 0.64 NOLOHH_07415 xanP xanthine/proton symporter XanP 0.54 NOLOHH_06550 xerC tyrosine recombinase XerC low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.64 OHPLBJKB_00047 Xanthine permease XanP 0.54 OHPLBJKB_04239 Tyrosine recombinase XerC low > 74
Escherichia coli ECOR38 0.64 HEPCGN_14355 xanP xanthine/proton symporter XanP 0.54 HEPCGN_13125 xerC tyrosine recombinase XerC low > 88
Escherichia coli BL21 0.64 ECD_03512 xanthine permease 0.55 ECD_03687 site-specific tyrosine recombinase low > 61
Escherichia fergusonii Becca 0.64 EFB2_00134 Xanthine permease XanP 0.54 EFB2_04826 Tyrosine recombinase XerC low > 86
Escherichia coli ECRC100 0.64 OKFHMN_15530 xanP xanthine/proton symporter XanP 0.55 OKFHMN_14420 xerC tyrosine recombinase XerC low > 79
Escherichia coli ECRC102 0.64 NIAGMN_13290 xanP xanthine/proton symporter XanP 0.55 NIAGMN_12175 xerC tyrosine recombinase XerC — —
Escherichia coli ECRC99 0.64 KEDOAH_12615 xanP xanthine/proton symporter XanP 0.55 KEDOAH_13730 xerC tyrosine recombinase XerC — —
Dickeya dianthicola 67-19 0.64 HGI48_RS21195 uracil-xanthine permease 0.56 HGI48_RS20045 tyrosine recombinase XerC low > 71
Dickeya dianthicola ME23 0.64 DZA65_RS22165 uracil-xanthine permease 0.56 DZA65_RS21090 tyrosine recombinase XerC low > 75
Pseudomonas sp. SVBP6 0.54 COO64_RS24120 nucleobase:cation symporter-2 family protein 0.39 COO64_RS01270 xerC tyrosine recombinase XerC low > 93
Pseudomonas segetis P6 0.53 MPMX49_04448 Xanthine permease XanP 0.40 MPMX49_04536 Tyrosine recombinase XerC — —
Pseudomonas aeruginosa PA14 0.52 IKLFDK_23675 xanthine permease XanP 0.40 IKLFDK_27050 tyrosine recombinase XerC low > 98
Pseudomonas aeruginosa MRSN321 0.52 DY961_RS21730 uracil-xanthine permease family protein 0.40 DY961_RS12285 xerC;go_function=site-specific tyrosine recombinase XerC low > 100
Pseudomonas aeruginosa PUPa3 0.52 DQ20_RS37565 uracil-xanthine permease family protein 0.40 DQ20_RS49840 xerC;go_function=site-specific tyrosine recombinase XerC low > 101
Pseudomonas sp. BP01 0.52 JOY50_RS06475 nucleobase:cation symporter-2 family protein 0.39 JOY50_RS22610 xerC tyrosine recombinase XerC low > 84
Pseudomonas putida KT2440 0.51 PP_3992 xanthine permease 0.39 PP_5230 Tyrosine recombinase XerC low > 96
Phocaeicola dorei CL03T12C01 0.50 ABI39_RS12615 purine permease 0.25 ABI39_RS03835 tyrosine-type recombinase/integrase — —
Bacteroides thetaiotaomicron VPI-5482 0.50 BT4473 putative purine permease (NCBI ptt file) 0.29 BT2742 integrase, site-specific recombinase (NCBI ptt file) low > 81
Phocaeicola vulgatus CL09T03C04 0.50 HMPREF1058_RS16700 purine permease 0.25 HMPREF1058_RS09445 tyrosine-type recombinase/integrase low > 67
Bacteroides stercoris CC31F 0.50 HMPREF1181_RS16580 purine permease 0.27 HMPREF1181_RS00625 tyrosine recombinase XerC low > 56
Bacteroides ovatus ATCC 8483 0.50 BACOVA_05281 xanthine permease 0.29 BACOVA_01050 site-specific recombinase, phage integrase family/ribosomal subunit interface protein low > 96
Pseudomonas fluorescens FW300-N2E3 0.49 AO353_23860 xanthine permease XanP 0.38 AO353_09050 recombinase XerC low > 101
Pseudomonas lactucae CFBP13502 0.49 GEMAOFIL_02758 Xanthine permease XanP 0.37 GEMAOFIL_05657 Tyrosine recombinase XerC low > 96
Pseudomonas orientalis W4I3 0.49 QF045_RS17365 nucleobase:cation symporter-2 family protein 0.37 QF045_RS01960 tyrosine recombinase XerC low > 93
Pseudomonas simiae WCS417 0.49 PS417_12545 xanthine permease XanP 0.34 PS417_27595 recombinase XerC low > 88
Pseudomonas sp. DMC3 0.48 GFF3458 Xanthine permease XanP 0.38 GFF370 Tyrosine recombinase XerC low > 89
Pseudomonas fluorescens SBW25 0.48 PFLU_RS13230 purine permease 0.34 PFLU_RS29280 tyrosine recombinase XerC low > 109
Pseudomonas fluorescens SBW25-INTG 0.48 PFLU_RS13230 purine permease 0.34 PFLU_RS29280 tyrosine recombinase XerC low > 109
Pseudomonas stutzeri RCH2 0.47 Psest_1193 xanthine permease 0.40 Psest_3767 tyrosine recombinase XerC low > 67
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_3236 Xanthine permease 0.38 PfGW456L13_842 Tyrosine recombinase XerC low > 87
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_4713 Xanthine permease 0.38 Pf1N1B4_2171 Tyrosine recombinase XerC low > 87
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_0676 Xanthine/uracil permease family 0.39 Psyr_0185 tyrosine recombinase XerC subunit low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_0676 Xanthine/uracil permease family 0.39 Psyr_0185 tyrosine recombinase XerC subunit low > 86
Alteromonas macleodii MIT1002 0.41 MIT1002_01588 Xanthine permease XanP 0.45 MIT1002_00157 Tyrosine recombinase XerC low > 70
Burkholderia phytofirmans PsJN 0.22 BPHYT_RS16160 purine permease 0.36 BPHYT_RS01655 tyrosine recombinase XerC — —
Azospirillum brasilense Sp245 0.22 AZOBR_RS30760 purine permease 0.23 AZOBR_RS03965 tyrosine recombinase XerC — —
Cupriavidus basilensis FW507-4G11 0.22 RR42_RS05260 purine permease 0.31 RR42_RS00615 recombinase XerC low > 128
Variovorax sp. SCN45 0.21 GFF5230 Xanthine-uracil permease 0.33 GFF4490 Site-specific tyrosine recombinase XerC — —
Pseudomonas sp. RS175 0.21 PFR28_01209 Uric acid transporter UacT 0.38 PFR28_04378 Tyrosine recombinase XerC low > 88
Ralstonia solanacearum PSI07 0.21 RPSI07_RS14075 purine permease 0.35 RPSI07_RS23690 tyrosine recombinase XerC low > 81
Ralstonia sp. UNC404CL21Col 0.21 ABZR87_RS15085 nucleobase:cation symporter-2 family protein 0.34 ABZR87_RS05065 tyrosine recombinase XerC low > 80
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_01840 uracil permease 0.38 AO356_12725 recombinase XerC low > 104
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_2235 Xanthine permease 0.38 Pf6N2E2_4416 Tyrosine recombinase XerC low > 103
Paraburkholderia sabiae LMG 24235 0.20 QEN71_RS02545 nucleobase:cation symporter-2 family protein 0.35 QEN71_RS00355 tyrosine recombinase XerC — —
Paraburkholderia bryophila 376MFSha3.1 0.20 H281DRAFT_04168 nucleobase:cation symporter-2, NCS2 family 0.34 H281DRAFT_02202 integrase/recombinase XerC — —
Ralstonia solanacearum IBSBF1503 0.20 RALBFv3_RS03235 purine permease 0.33 RALBFv3_RS09675 tyrosine recombinase XerC low > 76
Ralstonia solanacearum UW163 0.20 UW163_RS10490 purine permease 0.33 UW163_RS03905 tyrosine recombinase XerC — —
Variovorax sp. OAS795 0.20 ABID97_RS22265 nucleobase:cation symporter-2 family protein 0.33 ABID97_RS06150 tyrosine recombinase XerC low > 91
Paraburkholderia graminis OAS925 0.20 ABIE53_003405 xanthine permease 0.33 ABIE53_000426 integrase/recombinase XerC — —
Ralstonia solanacearum GMI1000 0.20 RS_RS10625 purine permease 0.34 RS_RS00260 Tyrosine recombinase XerC 1 low > 80
Castellaniella sp019104865 MT123 0.20 ABCV34_RS13785 nucleobase:cation symporter-2 family protein 0.34 ABCV34_RS13455 tyrosine recombinase XerC low > 48
Acidovorax sp. GW101-3H11 0.19 Ac3H11_1081 Xanthine-uracil permease 0.31 Ac3H11_1995 Tyrosine recombinase XerC low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.13 GFF3305 Xanthine permease 0.31 GFF547 Tyrosine recombinase XerC low > 90

Not shown: 10 genomes with orthologs for CSW01_13685 only; 24 genomes with orthologs for CSW01_00650 only