| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Klebsiella michiganensis M5al | 1.0 | BWI76_RS06780 | | MexE family multidrug efflux RND transporter periplasmic adaptor subunit | 1.0 | BWI76_RS24400 | | outer membrane channel protein TolC | 0.74 | 2 |
| Enterobacter sp. TBS_079 | 0.87 | MPMX20_01065 | | Multidrug efflux pump subunit AcrA | 0.83 | MPMX20_03882 | | Outer membrane protein TolC | 0.66 | 2 |
| Enterobacter asburiae PDN3 | 0.84 | EX28DRAFT_2495 | | RND family efflux transporter, MFP subunit | 0.84 | EX28DRAFT_3073 | | type I secretion outer membrane protein, TolC family | 0.77 | 2 |
| Escherichia coli ECRC62 | 0.83 | BNILDI_22550 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.81 | BNILDI_00905 | tolC | outer membrane channel protein TolC | low | > 75 |
| Escherichia coli ECRC99 | 0.83 | KEDOAH_19765 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.81 | KEDOAH_09340 | tolC | outer membrane channel protein TolC | — | — |
| Escherichia coli ECRC100 | 0.83 | OKFHMN_08200 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.81 | OKFHMN_18805 | tolC | outer membrane channel protein TolC | low | > 80 |
| Escherichia coli ECRC101 | 0.83 | MCAODC_27425 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.81 | MCAODC_09320 | tolC | outer membrane channel protein TolC | low | > 87 |
| Escherichia coli ECRC98 | 0.83 | JDDGAC_11850 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.81 | JDDGAC_22440 | tolC | outer membrane channel protein TolC | low | > 86 |
| Escherichia coli BL21 | 0.83 | ECD_00414 | | multidrug efflux system | 0.81 | ECD_02907 | | transport channel | 0.35 | 31 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.83 | OHPLBJKB_03211 | | Multidrug efflux pump subunit AcrA | 0.81 | OHPLBJKB_00668 | | Outer membrane protein TolC | 0.64 | 5 |
| Escherichia coli BW25113 | 0.83 | b0463 | acrA | multidrug efflux system (NCBI) | 0.81 | b3035 | tolC | outer membrane channel; specific tolerance to colicin E1; segregation of daughter chromosomes (VIMSS) | 0.62 | 2 |
| Escherichia coli ECRC102 | 0.83 | NIAGMN_06255 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.81 | NIAGMN_16570 | tolC | outer membrane channel protein TolC | — | — |
| Escherichia coli ECOR27 | 0.83 | NOLOHH_01135 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.81 | NOLOHH_10610 | tolC | outer membrane channel protein TolC | low | > 75 |
| Escherichia fergusonii Becca | 0.82 | EFB2_03595 | | Multidrug efflux pump subunit AcrA | 0.81 | EFB2_00773 | | Outer membrane protein TolC | low | > 86 |
| Escherichia coli ECOR38 | 0.82 | HEPCGN_06815 | acrA | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.81 | HEPCGN_17680 | tolC | outer membrane channel protein TolC | 0.93 | 2 |
| Escherichia coli Nissle 1917 | 0.82 | ECOLIN_RS02755 | | multidrug efflux RND transporter periplasmic adaptor subunit AcrA | 0.81 | ECOLIN_RS17515 | | outer membrane channel protein TolC | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.78 | GFF4380 | | Membrane fusion protein of RND family multidrug efflux pump | 0.85 | GFF3149 | | Type I secretion outer membrane protein, TolC precursor | low | > 78 |
| Pantoea sp. MT58 | 0.74 | IAI47_14510 | | efflux RND transporter periplasmic adaptor subunit | 0.74 | IAI47_03135 | | outer membrane channel protein TolC | 0.42 | 45 |
| Rahnella sp. WP5 | 0.74 | EX31_RS22475 | | efflux RND transporter periplasmic adaptor subunit | 0.77 | EX31_RS08100 | | outer membrane channel protein TolC | 0.72 | 2 |
| Erwinia tracheiphila SCR3 | 0.74 | LU632_RS18180 | | efflux RND transporter periplasmic adaptor subunit | 0.75 | LU632_RS20635 | tolC | outer membrane channel protein TolC | — | — |
| Serratia liquefaciens MT49 | 0.74 | IAI46_05190 | | multidrug efflux RND transporter periplasmic adaptor subunit SdeX | 0.74 | IAI46_21945 | | outer membrane channel protein TolC | 0.71 | 3 |
| Dickeya dadantii 3937 | 0.71 | DDA3937_RS05740 | | efflux RND transporter periplasmic adaptor subunit | 0.69 | DDA3937_RS01740 | | outer membrane channel protein TolC | low | > 74 |
| Dickeya dianthicola 67-19 | 0.69 | HGI48_RS05795 | | efflux RND transporter periplasmic adaptor subunit | 0.69 | HGI48_RS01635 | | outer membrane channel protein TolC | low | > 71 |
| Dickeya dianthicola ME23 | 0.69 | DZA65_RS06120 | | efflux RND transporter periplasmic adaptor subunit | 0.69 | DZA65_RS01710 | | outer membrane channel protein TolC | low | > 75 |
| Pectobacterium carotovorum WPP14 | 0.68 | HER17_RS15735 | | efflux RND transporter periplasmic adaptor subunit | 0.70 | HER17_RS19825 | | outer membrane channel protein TolC | low | > 75 |
| Pseudomonas fluorescens FW300-N2E2 | 0.51 | Pf6N2E2_2823 | | Multidrug efflux RND membrane fusion protein MexC | 0.23 | Pf6N2E2_3645 | | Type I secretion outer membrane protein, TolC precursor | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.51 | AO356_04875 | | antibiotic transporter | 0.23 | AO356_08815 | | channel protein TolC | low | > 104 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.51 | Psyr_4007 | | Secretion protein HlyD | 0.23 | Psyr_0543 | | Type I secretion outer membrane protein, TolC | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.51 | Psyr_4007 | | Secretion protein HlyD | 0.23 | Psyr_0543 | | Type I secretion outer membrane protein, TolC | low | > 86 |
| Pseudomonas sp. RS175 | 0.51 | PFR28_00632 | | putative efflux pump periplasmic linker TtgA | 0.22 | PFR28_05090 | | Outer membrane protein TolC | low | > 88 |
| Pseudomonas sp. S08-1 | 0.50 | OH686_16045 | | Multidrug efflux system, membrane fusion component | 0.24 | OH686_15890 | | Outer membrane channel TolC (OpmH) | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.48 | Psest_0309 | | RND family efflux transporter, MFP subunit | 0.24 | Psest_0476 | | type I secretion outer membrane protein, TolC family | low | > 67 |
| Pseudomonas fluorescens GW456-L13 | 0.48 | PfGW456L13_4580 | | Multidrug efflux RND membrane fusion protein MexC | 0.24 | PfGW456L13_188 | | Type I secretion outer membrane protein, TolC precursor | low | > 87 |
| Pseudomonas fluorescens SBW25 | 0.48 | PFLU_RS06810 | | efflux RND transporter periplasmic adaptor subunit | 0.22 | PFLU_RS02425 | | TolC family outer membrane protein | 0.58 | 94 |
| Pseudomonas fluorescens SBW25-INTG | 0.48 | PFLU_RS06810 | | efflux RND transporter periplasmic adaptor subunit | 0.22 | PFLU_RS02425 | | TolC family outer membrane protein | low | > 109 |
| Pseudomonas simiae WCS417 | 0.48 | PS417_06775 | | antibiotic transporter | 0.22 | PS417_02350 | | channel protein TolC | low | > 88 |
| Pseudomonas putida KT2440 | 0.48 | PP_1386 | | Probable efflux pump periplasmic linker TtgA | 0.24 | PP_4923 | | Outer membrane efflux protein | low | > 96 |
| Pseudomonas fluorescens FW300-N1B4 | 0.48 | Pf1N1B4_3247 | | Multidrug efflux RND membrane fusion protein MexC | 0.23 | Pf1N1B4_1448 | | Type I secretion outer membrane protein, TolC precursor | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.47 | Xcc-8004.1793.1 | | RND efflux system, membrane fusion protein CmeA | 0.22 | Xcc-8004.1042.1 | | Type I secretion outer membrane protein, TolC precursor | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.47 | AO353_17300 | | antibiotic transporter | 0.22 | AO353_13005 | | channel protein TolC | low | > 101 |
| Azospirillum brasilense Sp245 | 0.46 | AZOBR_RS30180 | | hemolysin D | 0.07 | AZOBR_RS18205 | | outer membrane efflux protein | — | — |
| Azospirillum sp. SherDot2 | 0.46 | MPMX19_05883 | | Multidrug resistance protein MexA | 0.12 | MPMX19_01309 | | Outer membrane efflux protein BepC | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.45 | ABZR86_RS18280 | | efflux RND transporter periplasmic adaptor subunit | 0.24 | ABZR86_RS17210 | | TolC family outer membrane protein | low | > 74 |
| Cupriavidus basilensis FW507-4G11 | 0.45 | RR42_RS32415 | | hemolysin D | 0.22 | RR42_RS15670 | | channel protein TolC | low | > 128 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.45 | H281DRAFT_01000 | | membrane fusion protein, multidrug efflux system | 0.17 | H281DRAFT_00100 | | outer membrane protein | low | > 103 |
| Shewanella amazonensis SB2B | 0.44 | Sama_3553 | | multidrug resistance protein AcrA/AcrE family (RefSeq) | 0.32 | Sama_3048 | tolC | outer membrane channel protein (RefSeq) | 0.56 | 20 |
| Ralstonia solanacearum IBSBF1503 | 0.44 | RALBFv3_RS19790 | | efflux RND transporter periplasmic adaptor subunit | 0.20 | RALBFv3_RS12715 | | channel protein TolC | low | > 76 |
| Ralstonia solanacearum UW163 | 0.44 | UW163_RS19385 | | efflux RND transporter periplasmic adaptor subunit | 0.20 | UW163_RS00850 | | channel protein TolC | — | — |
| Ralstonia sp. UNC404CL21Col | 0.44 | ABZR87_RS05310 | | efflux RND transporter periplasmic adaptor subunit | 0.19 | ABZR87_RS08765 | | TolC family outer membrane protein | low | > 80 |
| Ralstonia solanacearum GMI1000 | 0.44 | RS_RS21035 | | efflux RND transporter periplasmic adaptor subunit | 0.21 | RS_RS03495 | | channel protein TolC | low | > 80 |
| Shewanella oneidensis MR-1 | 0.44 | SO4693 | | multidrug resistance protein, AcrA/AcrE family (NCBI ptt file) | 0.36 | SO3904 | tolC | outer membrane protein TolC (NCBI ptt file) | 0.52 | 8 |
| Ralstonia solanacearum PSI07 | 0.44 | RPSI07_RS23900 | | efflux RND transporter periplasmic adaptor subunit | 0.21 | RPSI07_RS20545 | | channel protein TolC | low | > 81 |
| Shewanella sp. ANA-3 | 0.44 | Shewana3_4046 | | RND family efflux transporter MFP subunit (RefSeq) | 0.35 | Shewana3_0725 | tolC | outer membrane channel protein (RefSeq) | 0.58 | 2 |
| Rhodopseudomonas palustris CGA009 | 0.43 | TX73_012250 | | efflux RND transporter periplasmic adaptor subunit | 0.08 | TX73_013360 | | TolC family outer membrane protein | — | — |
| Bosea sp. OAE506 | 0.40 | ABIE41_RS01600 | | efflux RND transporter periplasmic adaptor subunit | 0.09 | ABIE41_RS15655 | | TolC family outer membrane protein | low | > 77 |
| Acinetobacter radioresistens SK82 | 0.40 | MPMX26_00690 | | Multidrug efflux pump subunit AcrA | 0.15 | MPMX26_00182 | | Outer membrane protein TolC | low | > 36 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.38 | GFF5686 | | RND efflux system, membrane fusion protein CmeA | 0.21 | GFF5765 | | Type I secretion outer membrane protein, TolC precursor | low | > 90 |
| Variovorax sp. OAS795 | 0.38 | ABID97_RS00320 | | efflux RND transporter periplasmic adaptor subunit | 0.20 | ABID97_RS21375 | | TolC family outer membrane protein | low | > 91 |
| Acidovorax sp. GW101-3H11 | 0.34 | Ac3H11_4449 | | RND efflux system, membrane fusion protein CmeA | 0.20 | Ac3H11_2219 | | Type I secretion outer membrane protein, TolC precursor | low | > 79 |
| Rhodanobacter sp. FW510-T8 | 0.34 | OKGIIK_09165 | acrA | efflux transporter periplasmic adaptor subunit | 0.22 | OKGIIK_16950 | tolC | Outer membrane protein TolC | low | > 52 |
| Kangiella aquimarina DSM 16071 | 0.33 | B158DRAFT_0734 | | RND family efflux transporter, MFP subunit | 0.24 | B158DRAFT_0973 | | type I secretion outer membrane protein, TolC family | low | > 40 |
| Rhodanobacter denitrificans FW104-10B01 | 0.31 | LRK54_RS02095 | | efflux RND transporter periplasmic adaptor subunit | 0.22 | LRK54_RS06685 | | TolC family outer membrane protein | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.31 | LRK55_RS01870 | | efflux RND transporter periplasmic adaptor subunit | 0.23 | LRK55_RS06430 | | TolC family outer membrane protein | low | > 63 |
| Lysobacter sp. OAE881 | 0.30 | ABIE51_RS17985 | | efflux RND transporter periplasmic adaptor subunit | 0.18 | ABIE51_RS17615 | | TolC family outer membrane protein | 0.77 | 2 |
Not shown: 10 genomes with orthologs for BWI76_RS06780 only; 18 genomes with orthologs for BWI76_RS24400 only