| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Klebsiella michiganensis M5al | 1.0 | BWI76_RS20995 | | RNA degradosome polyphosphate kinase | 1.0 | BWI76_RS04850 | | N-acetylmuramoyl-L-alanine amidase | 0.42 | 12 |
| Enterobacter sp. TBS_079 | 0.94 | MPMX20_03356 | | Polyphosphate kinase | 0.84 | MPMX20_00801 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 85 |
| Enterobacter asburiae PDN3 | 0.94 | EX28DRAFT_0166 | | polyphosphate kinase 1 | 0.87 | EX28DRAFT_3703 | | N-acetylmuramoyl-L-alanine amidase | — | — |
| Escherichia coli ECRC100 | 0.94 | OKFHMN_21800 | ppk1 | polyphosphate kinase 1 | 0.85 | OKFHMN_10525 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 80 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.94 | OHPLBJKB_01225 | | Polyphosphate kinase | 0.84 | OHPLBJKB_03551 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 73 |
| Escherichia coli BL21 | 0.94 | ECD_02393 | | polyphosphate kinase, component of RNA degradosome | 0.84 | ECD_00109 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase, Zn-dependent; murein amidase | low | > 61 |
| Escherichia coli ECOR38 | 0.94 | HEPCGN_20965 | ppk1 | polyphosphate kinase 1 | 0.84 | HEPCGN_08505 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 87 |
| Escherichia coli BW25113 | 0.94 | b2501 | ppk | polyphosphate kinase (NCBI) | 0.84 | b0110 | ampD | N-acetyl-anhydromuranmyl-L-alanine amidase (NCBI) | low | > 76 |
| Escherichia coli ECRC101 | 0.94 | MCAODC_12330 | ppk1 | polyphosphate kinase 1 | 0.85 | MCAODC_01040 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 87 |
| Escherichia coli ECRC102 | 0.94 | NIAGMN_19570 | ppk1 | polyphosphate kinase 1 | 0.85 | NIAGMN_08375 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | — | — |
| Escherichia coli ECRC99 | 0.94 | KEDOAH_06420 | ppk1 | polyphosphate kinase 1 | 0.85 | KEDOAH_17630 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | — | — |
| Escherichia coli ECRC62 | 0.94 | BNILDI_12260 | ppk1 | polyphosphate kinase 1 | 0.84 | BNILDI_08740 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 75 |
| Escherichia coli ECRC98 | 0.94 | JDDGAC_25745 | ppk1 | polyphosphate kinase 1 | 0.85 | JDDGAC_14120 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 86 |
| Escherichia coli ECOR27 | 0.94 | NOLOHH_13450 | ppk1 | polyphosphate kinase 1 | 0.84 | NOLOHH_02870 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 75 |
| Escherichia coli Nissle 1917 | 0.94 | ECOLIN_RS14200 | | polyphosphate kinase 1 | 0.84 | ECOLIN_RS00590 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.77 | 22 |
| Escherichia fergusonii Becca | 0.94 | EFB2_01397 | | Polyphosphate kinase | 0.84 | EFB2_03939 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.92 | GFF2167 | | Polyphosphate kinase (EC 2.7.4.1) | 0.85 | GFF129 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD | low | > 78 |
| Serratia liquefaciens MT49 | 0.86 | IAI46_18915 | | polyphosphate kinase 1 | 0.70 | IAI46_03535 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 86 |
| Rahnella sp. WP5 | 0.86 | EX31_RS22680 | | polyphosphate kinase 1 | 0.70 | EX31_RS03510 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 89 |
| Pantoea sp. MT58 | 0.84 | IAI47_05155 | | polyphosphate kinase 1 | 0.69 | IAI47_15840 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 76 |
| Dickeya dadantii 3937 | 0.83 | DDA3937_RS15150 | | polyphosphate kinase 1 | 0.68 | DDA3937_RS17945 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 74 |
| Dickeya dianthicola ME23 | 0.83 | DZA65_RS16045 | | polyphosphate kinase 1 | 0.69 | DZA65_RS19020 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 75 |
| Dickeya dianthicola 67-19 | 0.83 | HGI48_RS15225 | | polyphosphate kinase 1 | 0.69 | HGI48_RS17875 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 71 |
| Pectobacterium carotovorum WPP14 | 0.83 | HER17_RS06425 | | polyphosphate kinase 1 | 0.70 | HER17_RS03260 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 75 |
| Vibrio cholerae E7946 ATCC 55056 | 0.67 | CSW01_03780 | | polyphosphate kinase 1 | 0.60 | CSW01_12260 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 62 |
| Shewanella sp. ANA-3 | 0.55 | Shewana3_2417 | | polyphosphate kinase (RefSeq) | 0.57 | Shewana3_0423 | | N-acetyl-anhydromuranmyl-L-alanine amidase (RefSeq) | low | > 73 |
| Shewanella loihica PV-4 | 0.55 | Shew_3079 | | polyphosphate kinase (RefSeq) | 0.58 | Shew_3434 | | N-acetyl-anhydromuranmyl-L-alanine amidase (RefSeq) | low | > 60 |
| Shewanella amazonensis SB2B | 0.54 | Sama_2011 | | polyphosphate kinase (RefSeq) | 0.55 | Sama_0372 | | N-acetyl-anhydromuranmyl-L-alanine amidase (RefSeq) | low | > 62 |
| Alteromonas macleodii MIT1002 | 0.52 | MIT1002_00872 | | Polyphosphate kinase | 0.58 | MIT1002_03006 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 70 |
| Pseudomonas sp. S08-1 | 0.29 | OH686_13995 | | polyphosphate kinase 1 | 0.54 | OH686_16530 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase | low | > 80 |
| Pseudomonas fluorescens GW456-L13 | 0.29 | PfGW456L13_874 | | Polyphosphate kinase (EC 2.7.4.1) | 0.53 | PfGW456L13_5081 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.29 | AO353_08885 | | polyphosphate kinase | 0.53 | AO353_05510 | | N-acetyl-anhydromuranmyl-L-alanine amidase | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.29 | Pf1N1B4_2208 | | Polyphosphate kinase (EC 2.7.4.1) | 0.55 | Pf1N1B4_1151 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.29 | PFLU_RS29095 | | polyphosphate kinase 1 | 0.53 | PFLU_RS03980 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 109 |
| Pseudomonas simiae WCS417 | 0.29 | PS417_27435 | | polyphosphate kinase | 0.53 | PS417_03935 | | N-acetyl-anhydromuranmyl-L-alanine amidase | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.29 | PFLU_RS29095 | | polyphosphate kinase 1 | 0.53 | PFLU_RS03980 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.71 | 40 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.29 | Psyr_0293 | | Polyphosphate kinase | 0.53 | Psyr_0817 | | N-acetylmuramoyl-L-alanine amidase, family 2 | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.29 | Psyr_0293 | | Polyphosphate kinase | 0.53 | Psyr_0817 | | N-acetylmuramoyl-L-alanine amidase, family 2 | low | > 86 |
| Pseudomonas putida KT2440 | 0.29 | PP_5217 | | Polyphosphate kinase | 0.53 | PP_0789 | | N-acetyl-anhydromuramyl-L-alanine-amidase | 0.37 | 12 |
| Pseudomonas sp. RS175 | 0.29 | PFR28_04345 | | Polyphosphate kinase | 0.54 | PFR28_00100 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.29 | Pf6N2E2_4453 | | Polyphosphate kinase (EC 2.7.4.1) | 0.54 | Pf6N2E2_3344 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.29 | AO356_12895 | | polyphosphate kinase | 0.54 | AO356_07360 | | N-acetyl-anhydromuranmyl-L-alanine amidase | low | > 104 |
| Pseudomonas stutzeri RCH2 | 0.28 | Psest_3732 | | polyphosphate kinase 1 | 0.51 | Psest_0725 | | Negative regulator of beta-lactamase expression | low | > 67 |
| Dechlorosoma suillum PS | 0.28 | Dsui_2814 | | polyphosphate kinase 1 | 0.57 | Dsui_0134 | | negative regulator of beta-lactamase expression | low | > 51 |
| Cupriavidus basilensis FW507-4G11 | 0.28 | RR42_RS13435 | | polyphosphate kinase | 0.50 | RR42_RS17865 | | N-acetyl-anhydromuranmyl-L-alanine amidase | low | > 128 |
| Ralstonia sp. UNC404CL21Col | 0.28 | ABZR87_RS14065 | | polyphosphate kinase 1 | 0.50 | ABZR87_RS01745 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 80 |
| Herbaspirillum seropedicae SmR1 | 0.28 | HSERO_RS06305 | | polyphosphate kinase | 0.55 | HSERO_RS01880 | | N-acetyl-anhydromuranmyl-L-alanine amidase | low | > 78 |
| Kangiella aquimarina DSM 16071 | 0.27 | B158DRAFT_2312 | | polyphosphate kinase 1 | 0.60 | B158DRAFT_2134 | | Negative regulator of beta-lactamase expression | low | > 40 |
| Acinetobacter radioresistens SK82 | 0.27 | MPMX26_02335 | | Polyphosphate kinase | 0.52 | MPMX26_00043 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 36 |
| Ralstonia solanacearum GMI1000 | 0.27 | RS_RS07705 | | polyphosphate kinase 1 | 0.49 | RS_RS14030 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | — | — |
| Ralstonia solanacearum PSI07 | 0.27 | RPSI07_RS15330 | | polyphosphate kinase 1 | 0.50 | RPSI07_RS11160 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.27 | RALBFv3_RS02115 | | polyphosphate kinase 1 | 0.51 | RALBFv3_RS06080 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | — | — |
| Ralstonia solanacearum UW163 | 0.27 | UW163_RS15425 | | polyphosphate kinase 1 | 0.51 | UW163_RS07545 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.26 | QEN71_RS04860 | | polyphosphate kinase 1 | 0.50 | QEN71_RS27225 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.54 | 103 |
| Paraburkholderia graminis OAS925 | 0.26 | ABIE53_002988 | | polyphosphate kinase | 0.52 | ABIE53_003579 | | AmpD protein | 0.43 | 22 |
| Burkholderia phytofirmans PsJN | 0.26 | BPHYT_RS14110 | | polyphosphate kinase | 0.50 | BPHYT_RS17065 | | N-acetyl-anhydromuranmyl-L-alanine amidase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.26 | H281DRAFT_04418 | | polyphosphate kinase | 0.50 | H281DRAFT_06273 | | AmpD protein | low | > 103 |
| Marinobacter adhaerens HP15 | 0.25 | HP15_3334 | | polyphosphate kinase | 0.51 | HP15_1307 | | N-acetyl-anhydromuranmyl-L-alanine amidase | — | — |
| Variovorax sp. SCN45 | 0.25 | GFF1089 | | Polyphosphate kinase (EC 2.7.4.1) | 0.42 | GFF4433 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase | low | > 127 |
| Acidovorax sp. GW101-3H11 | 0.25 | Ac3H11_452 | | Polyphosphate kinase (EC 2.7.4.1) | 0.37 | Ac3H11_4020 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD | — | — |
| Castellaniella sp019104865 MT123 | 0.24 | ABCV34_RS15580 | | polyphosphate kinase 1 | 0.51 | ABCV34_RS09025 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 48 |
| Variovorax sp. OAS795 | 0.24 | ABID97_RS14575 | | polyphosphate kinase 1 | 0.42 | ABID97_RS06410 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.23 | GFF4226 | | Polyphosphate kinase (EC 2.7.4.1) | 0.47 | GFF594 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD | — | — |
Not shown: 34 genomes with orthologs for BWI76_RS20995 only; 1 genomes with orthologs for BWI76_RS04850 only