Conservation of cofitness between BPHYT_RS18925 and BPHYT_RS18825 in Burkholderia phytofirmans PsJN

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS18925 RNA polymerase sigma70 1.0 BPHYT_RS18825 flagellar biosynthesis protein FliP 0.86 18
Paraburkholderia graminis OAS925 0.99 ABIE53_000108 RNA polymerase sigma factor for flagellar operon FliA 0.88 ABIE53_000084 flagellar biosynthetic protein FliP 0.98 12
Paraburkholderia bryophila 376MFSha3.1 0.98 H281DRAFT_05756 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG 0.88 H281DRAFT_05776 flagellar biosynthetic protein FliP 0.62 17
Paraburkholderia sabiae LMG 24235 0.95 QEN71_RS28940 RNA polymerase sigma factor FliA 0.81 QEN71_RS28845 flagellar type III secretion system pore protein FliP 0.87 33
Ralstonia solanacearum IBSBF1503 0.61 RALBFv3_RS17485 RNA polymerase sigma factor FliA 0.56 RALBFv3_RS21665 flagellar biosynthetic protein FliP low > 76
Ralstonia solanacearum UW163 0.61 UW163_RS21665 RNA polymerase sigma factor FliA 0.56 UW163_RS17520 flagellar biosynthetic protein FliP — —
Ralstonia sp. UNC404CL21Col 0.60 ABZR87_RS18040 RNA polymerase sigma factor FliA 0.55 ABZR87_RS22210 flagellar type III secretion system pore protein FliP 0.96 4
Ralstonia solanacearum GMI1000 0.60 RS_RS23830 RNA polymerase sigma factor FliA 0.56 RS_RS18960 flagellar biosynthetic protein FliP low > 80
Ralstonia solanacearum PSI07 0.60 RPSI07_RS06165 RNA polymerase sigma factor FliA 0.56 RPSI07_RS01460 flagellar biosynthetic protein FliP low > 81
Herbaspirillum seropedicae SmR1 0.59 HSERO_RS10160 flagellar biosynthesis sigma factor 0.59 HSERO_RS10260 flagellar biosynthesis protein FliP 0.88 19
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS35750 DNA-directed RNA polymerase sigma-70 factor 0.60 RR42_RS23360 flagellar biosynthesis protein flip low > 128
Methylophilus sp. DMC18 0.58 GFF1338 RNA polymerase sigma factor FliA 0.57 GFF550 Flagellar biosynthetic protein FliP low > 43
Variovorax sp. SCN45 0.58 GFF5774 RNA polymerase sigma factor for flagellar operon 0.62 GFF5740 Flagellar biosynthesis protein FliP — —
Dechlorosoma suillum PS 0.55 Dsui_1726 RNA polymerase sigma factor, FliA/WhiG family 0.43 Dsui_1746 flagellar biosynthetic protein FliP 0.75 6
Hydrogenophaga sp. GW460-11-11-14-LB1 0.54 GFF1428 RNA polymerase sigma factor for flagellar operon 0.52 GFF1461 Flagellar biosynthesis protein FliP low > 90
Acidovorax sp. GW101-3H11 0.52 Ac3H11_1381 RNA polymerase sigma factor for flagellar operon 0.53 Ac3H11_1414 Flagellar biosynthesis protein FliP low > 79
Erwinia tracheiphila SCR3 0.50 LU632_RS13785 RNA polymerase sigma factor FliA 0.55 LU632_RS10525 fliP flagellar type III secretion system pore protein FliP low > 74
Pantoea sp. MT58 0.50 IAI47_08160 RNA polymerase sigma factor FliA 0.57 IAI47_07980 flagellar type III secretion system pore protein FliP 0.80 26
Erwinia amylovora T8 0.49 OLJFJH_12555 RNA polymerase sigma factor FliA 0.58 OLJFJH_15405 flagellar type III secretion system pore protein FliP low > 58
Escherichia coli ECRC101 0.49 MCAODC_19610 fliA RNA polymerase sigma factor FliA 0.60 MCAODC_19730 fliP flagellar type III secretion system pore protein FliP low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.49 OHPLBJKB_01807 RNA polymerase sigma factor FliA 0.59 OHPLBJKB_01781 Flagellar biosynthetic protein FliP low > 73
Escherichia coli ECRC99 0.49 KEDOAH_02310 fliA RNA polymerase sigma factor FliA 0.60 KEDOAH_02430 fliP flagellar type III secretion system pore protein FliP — —
Escherichia coli Nissle 1917 0.49 ECOLIN_RS10975 RNA polymerase sigma factor FliA 0.59 ECOLIN_RS11110 flagellar type III secretion system pore protein FliP — —
Escherichia coli ECRC100 0.49 OKFHMN_25780 fliA RNA polymerase sigma factor FliA 0.60 OKFHMN_25665 fliP flagellar type III secretion system pore protein FliP 0.66 77
Escherichia coli ECRC102 0.49 NIAGMN_02270 fliA RNA polymerase sigma factor FliA 0.60 NIAGMN_02390 fliP flagellar type III secretion system pore protein FliP — —
Escherichia coli ECOR38 0.49 HEPCGN_04135 fliA RNA polymerase sigma factor FliA 0.59 HEPCGN_04025 fliP flagellar type III secretion system pore protein FliP low > 87
Escherichia coli ECRC98 0.49 JDDGAC_00370 fliA RNA polymerase sigma factor FliA 0.60 JDDGAC_00250 fliP flagellar type III secretion system pore protein FliP low > 86
Escherichia coli ECOR27 0.49 NOLOHH_16400 fliA RNA polymerase sigma factor FliA 0.60 NOLOHH_16295 fliP flagellar type III secretion system pore protein FliP 0.73 70
Escherichia coli BW25113 0.49 b1922 fliA flagellar biosynthesis; alternative sigma factor 28; regulation of flagellar operons (VIMSS) 0.60 b1948 fliP flagellar biosynthesis protein P (NCBI) 0.38 23
Escherichia coli ECRC62 0.49 BNILDI_15190 fliA RNA polymerase sigma factor FliA 0.60 BNILDI_15085 fliP flagellar type III secretion system pore protein FliP low > 75
Serratia liquefaciens MT49 0.49 IAI46_15785 RNA polymerase sigma factor FliA 0.59 IAI46_15890 flagellar type III secretion system pore protein FliP 0.54 12
Escherichia fergusonii Becca 0.49 EFB2_02023 RNA polymerase sigma factor FliA 0.59 EFB2_01998 Flagellar biosynthetic protein FliP low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.49 GFF1690 RNA polymerase sigma factor for flagellar operon 0.60 GFF4008 Flagellar biosynthesis protein FliP low > 78
Rahnella sp. WP5 0.49 EX31_RS09450 RNA polymerase sigma factor FliA 0.53 EX31_RS09590 flagellar type III secretion system pore protein FliP low > 89
Enterobacter sp. TBS_079 0.48 MPMX20_02847 RNA polymerase sigma factor FliA 0.58 MPMX20_02945 Flagellar biosynthetic protein FliP 0.91 4
Enterobacter asburiae PDN3 0.48 EX28DRAFT_0625 RNA polymerase sigma factor, FliA/WhiG family 0.58 EX28DRAFT_0606 flagellar biosynthetic protein FliP low > 76
Dickeya dianthicola 67-19 0.48 HGI48_RS13350 RNA polymerase sigma factor FliA 0.58 HGI48_RS13460 flagellar type III secretion system pore protein FliP 0.81 20
Dickeya dianthicola ME23 0.48 DZA65_RS13835 RNA polymerase sigma factor FliA 0.58 DZA65_RS13945 flagellar type III secretion system pore protein FliP 0.98 10
Dickeya dadantii 3937 0.47 DDA3937_RS13300 RNA polymerase sigma factor FliA 0.59 DDA3937_RS13415 flagellar type III secretion system pore protein FliP 0.97 9
Pseudomonas sp. S08-1 0.47 OH686_02730 RNA polymerase sigma factor for flagellar operon 0.50 OH686_02770 flagellar biosynthetic protein FliP 0.85 15
Lysobacter sp. OAE881 0.47 ABIE51_RS16865 RNA polymerase sigma factor FliA 0.37 ABIE51_RS16830 flagellar type III secretion system pore protein FliP 0.86 11
Pseudomonas stutzeri RCH2 0.46 Psest_1740 RNA polymerase sigma factor, FliA/WhiG family 0.51 Psest_1732 flagellar biosynthetic protein FliP 0.89 15
Marinobacter adhaerens HP15 0.46 HP15_2302 flagellar biosynthesis sigma factor FliA 0.49 HP15_2312 flagellar biosynthesis protein FliP 0.90 4
Pseudomonas aeruginosa PA14 0.46 IKLFDK_06920 flagellar biosynthesis sigma factor FliA 0.49 IKLFDK_06875 flagellar biosynthetic protein FliP 0.49 50
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_4331 RNA polymerase sigma factor for flagellar operon 0.49 PfGW456L13_4339 Flagellar biosynthesis protein FliP low > 87
Pseudomonas fluorescens FW300-N2E3 0.45 AO353_18785 flagellar biosynthesis sigma factor 0.50 AO353_18745 flagellar biosynthesis protein flip 0.47 60
Shewanella sp. ANA-3 0.45 Shewana3_1359 fliA flagellar biosynthesis sigma factor (RefSeq) 0.50 Shewana3_1352 fliP flagellar biosynthesis protein FliP (RefSeq) — —
Pectobacterium carotovorum WPP14 0.44 HER17_RS08355 RNA polymerase sigma factor FliA 0.56 HER17_RS08230 flagellar type III secretion system pore protein FliP 0.94 6
Castellaniella sp019104865 MT123 0.44 ABCV34_RS05605 RNA polymerase sigma factor FliA 0.57 ABCV34_RS05695 flagellar type III secretion system pore protein FliP 0.64 33
Shewanella oneidensis MR-1 0.44 SO3210 fliA RNA polymerase sigma-27 factor (NCBI ptt file) 0.50 SO3218 fliP flagellar biosynthetic protein FliP (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.44 Shew_1383 fliA flagellar biosynthesis sigma factor (RefSeq) 0.53 Shew_1376 fliP flagellar biosynthesis protein FliP (RefSeq) 0.96 20
Shewanella amazonensis SB2B 0.44 Sama_2280 fliA flagellar biosynthesis sigma factor (RefSeq) 0.51 Sama_2287 fliP flagellar biosynthesis protein FliP (RefSeq) 0.98 19
Rhodanobacter sp. FW510-T8 0.44 OKGIIK_02830 fliA RNA polymerase sigma factor FliA 0.47 OKGIIK_02795 fliP flagellar type III secretion system pore protein FliP low > 52
Rhodanobacter denitrificans MT42 0.43 LRK55_RS13320 RNA polymerase sigma factor FliA 0.49 LRK55_RS13285 flagellar type III secretion system pore protein FliP low > 63
Rhodanobacter denitrificans FW104-10B01 0.43 LRK54_RS13580 RNA polymerase sigma factor FliA 0.49 LRK54_RS13545 flagellar type III secretion system pore protein FliP 0.70 7
Rhodanobacter sp000427505 FW510-R12 0.42 LRK53_RS14995 RNA polymerase sigma factor FliA 0.48 LRK53_RS15030 flagellar type III secretion system pore protein FliP low > 60
Alteromonas macleodii MIT1002 0.42 MIT1002_01103 Sigma-F factor 0.44 MIT1002_01095 Flagellar biosynthetic protein FliP precursor low > 70
Dyella japonica UNC79MFTsu3.2 0.42 ABZR86_RS20265 RNA polymerase sigma factor FliA 0.53 ABZR86_RS20230 flagellar type III secretion system pore protein FliP low > 74
Desulfovibrio vulgaris Hildenborough JW710 0.32 DVU3229 fliA RNA polymerase sigma factor for flagellar operon FliA (TIGR) 0.35 DVU0044 fliP flagellar biosynthetic protein fliP (TIGR) 0.88 14

Not shown: 17 genomes with orthologs for BPHYT_RS18925 only; 9 genomes with orthologs for BPHYT_RS18825 only