Conservation of cofitness between BPHYT_RS13220 and BPHYT_RS14910 in Burkholderia phytofirmans PsJN

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS13220 phosphomethylpyrimidine synthase 1.0 BPHYT_RS14910 chorismate mutase 0.70 12
Paraburkholderia graminis OAS925 0.99 ABIE53_002857 phosphomethylpyrimidine synthase 0.93 ABIE53_003157 chorismate mutase/prephenate dehydratase 0.73 10
Paraburkholderia bryophila 376MFSha3.1 0.98 H281DRAFT_00395 hydroxymethylpyrimidine synthase 0.93 H281DRAFT_03925 chorismate mutase 0.53 20
Paraburkholderia sabiae LMG 24235 0.95 QEN71_RS05480 phosphomethylpyrimidine synthase ThiC 0.89 QEN71_RS04070 prephenate dehydratase 0.83 13
Herbaspirillum seropedicae SmR1 0.85 HSERO_RS02120 phosphomethylpyrimidine synthase ThiC 0.61 HSERO_RS18430 chorismate mutase 0.34 55
Dechlorosoma suillum PS 0.85 Dsui_0422 thiamine biosynthesis protein ThiC 0.47 Dsui_1940 chorismate mutase, clade 2 — —
Castellaniella sp019104865 MT123 0.78 ABCV34_RS10825 phosphomethylpyrimidine synthase ThiC 0.55 ABCV34_RS07110 prephenate dehydratase low > 48
Dyella japonica UNC79MFTsu3.2 0.75 ABZR86_RS17230 phosphomethylpyrimidine synthase ThiC 0.44 ABZR86_RS02225 prephenate dehydratase low > 74
Marinobacter adhaerens HP15 0.75 HP15_453 thiamine biosynthesis protein thiC 0.46 HP15_1362 chorismate mutase / prephenate dehydratase — —
Pseudomonas putida KT2440 0.75 PP_4922 Phosphomethylpyrimidine synthase 0.47 PP_1769 chorismate mutase/Prephenate dehydratase — —
Rhodanobacter sp. FW510-T8 0.74 OKGIIK_16965 thiC phosphomethylpyrimidine synthase ThiC 0.43 OKGIIK_06915 pheA prephenate dehydratase low > 52
Pseudomonas sp. S08-1 0.74 OH686_15885 phosphomethylpyrimidine synthase 0.45 OH686_20870 Chorismate mutase I / Prephenate dehydratase low > 80
Pseudomonas stutzeri RCH2 0.74 Psest_0477 thiamine biosynthesis protein ThiC 0.45 Psest_1984 chorismate mutase domain of proteobacterial P-protein, clade 2 — —
Pseudomonas fluorescens FW300-N2E2 0.74 Pf6N2E2_3644 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.46 Pf6N2E2_2520 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) — —
Xanthomonas campestris pv. campestris strain 8004 0.74 Xcc-8004.1066.1 hypothetical protein 0.43 Xcc-8004.3282.1 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.60 48
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_13010 thiamine biosynthesis protein ThiC 0.46 AO353_02070 prephenate dehydratase low > 101
Pseudomonas fluorescens FW300-N2C3 0.74 AO356_08810 thiamine biosynthesis protein ThiC 0.46 AO356_03465 prephenate dehydratase — —
Pseudomonas sp. RS175 0.74 PFR28_05091 Phosphomethylpyrimidine synthase 0.46 PFR28_00907 Bifunctional chorismate mutase/prephenate dehydratase — —
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_1447 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.46 Pf1N1B4_350 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 87
Pseudomonas fluorescens SBW25 0.73 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC 0.46 PFLU_RS08095 prephenate dehydratase — —
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC 0.46 PFLU_RS08095 prephenate dehydratase — —
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_187 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.46 PfGW456L13_2176 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 87
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_0544 hydroxymethylpyrimidine synthase 0.46 Psyr_3645 prephenate dehydratase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_0544 hydroxymethylpyrimidine synthase 0.46 Psyr_3645 prephenate dehydratase — —
Pseudomonas simiae WCS417 0.73 PS417_02355 thiamine biosynthesis protein ThiC 0.46 PS417_08125 prephenate dehydratase low > 88
Lysobacter sp. OAE881 0.73 ABIE51_RS17515 phosphomethylpyrimidine synthase ThiC 0.42 ABIE51_RS12145 prephenate dehydratase low > 62
Acinetobacter radioresistens SK82 0.71 MPMX26_00180 Phosphomethylpyrimidine synthase 0.39 MPMX26_02021 Bifunctional chorismate mutase/prephenate dehydratase low > 36
Ralstonia solanacearum PSI07 0.69 RPSI07_RS23420 phosphomethylpyrimidine synthase ThiC 0.61 RPSI07_RS19710 prephenate dehydratase low > 81
Pectobacterium carotovorum WPP14 0.69 HER17_RS20380 phosphomethylpyrimidine synthase ThiC 0.24 HER17_RS05385 bifunctional chorismate mutase/prephenate dehydratase 0.79 46
Ralstonia sp. UNC404CL21Col 0.68 ABZR87_RS04785 phosphomethylpyrimidine synthase ThiC 0.62 ABZR87_RS09450 prephenate dehydratase 0.59 30
Cupriavidus basilensis FW507-4G11 0.68 RR42_RS01290 thiamine biosynthesis protein ThiC 0.65 RR42_RS04460 chorismate mutase 0.75 24
Ralstonia solanacearum IBSBF1503 0.68 RALBFv3_RS09940 phosphomethylpyrimidine synthase ThiC 0.60 RALBFv3_RS13760 chorismate mutase 0.55 12
Ralstonia solanacearum UW163 0.68 UW163_RS03640 phosphomethylpyrimidine synthase ThiC 0.60 UW163_RS16050 chorismate mutase — —
Rahnella sp. WP5 0.68 EX31_RS16815 phosphomethylpyrimidine synthase ThiC 0.22 EX31_RS07585 bifunctional chorismate mutase/prephenate dehydratase low > 89
Ralstonia solanacearum GMI1000 0.68 RS_RS00555 phosphomethylpyrimidine synthase 0.62 RS_RS04495 prephenate dehydratase 0.65 3
Enterobacter sp. TBS_079 0.68 MPMX20_00217 Phosphomethylpyrimidine synthase 0.25 MPMX20_03466 Bifunctional chorismate mutase/prephenate dehydratase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.68 GFF4198 Thiamin biosynthesis protein ThiC 0.23 GFF4179 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 78
Serratia liquefaciens MT49 0.67 IAI46_01320 phosphomethylpyrimidine synthase ThiC 0.22 IAI46_03965 bifunctional chorismate mutase/prephenate dehydratase low > 86
Enterobacter asburiae PDN3 0.67 EX28DRAFT_4536 phosphomethylpyrimidine synthase 0.26 EX28DRAFT_2699 chorismate mutase (EC 5.4.99.5) 0.53 67
Escherichia coli Nissle 1917 0.67 ECOLIN_RS23040 phosphomethylpyrimidine synthase ThiC 0.27 ECOLIN_RS14695 bifunctional chorismate mutase/prephenate dehydratase low > 55
Escherichia fergusonii Becca 0.67 EFB2_04617 Phosphomethylpyrimidine synthase 0.27 EFB2_01293 Bifunctional chorismate mutase/prephenate dehydratase low > 86
Kangiella aquimarina DSM 16071 0.67 B158DRAFT_0295 hydroxymethylpyrimidine synthase 0.23 B158DRAFT_1385 Prephenate dehydratase low > 40
Escherichia coli ECOR27 0.67 NOLOHH_05520 thiC phosphomethylpyrimidine synthase ThiC 0.27 NOLOHH_12900 pheA bifunctional chorismate mutase/prephenate dehydratase low > 75
Escherichia coli ECRC101 0.67 MCAODC_03875 thiC phosphomethylpyrimidine synthase ThiC 0.26 MCAODC_11755 pheA bifunctional chorismate mutase/prephenate dehydratase low > 87
Escherichia coli BW25113 0.67 b3994 thiC thiamine biosynthesis protein ThiC (NCBI) 0.26 b2599 pheA fused chorismate mutase P/prephenate dehydratase (NCBI) 0.51 36
Escherichia coli ECRC99 0.67 KEDOAH_14785 thiC phosphomethylpyrimidine synthase ThiC 0.26 KEDOAH_06995 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.67 OHPLBJKB_04056 Phosphomethylpyrimidine synthase 0.26 OHPLBJKB_01109 P-protein low > 73
Escherichia coli ECRC62 0.67 BNILDI_06005 thiC phosphomethylpyrimidine synthase ThiC 0.27 BNILDI_11705 pheA bifunctional chorismate mutase/prephenate dehydratase low > 75
Escherichia coli ECRC98 0.67 JDDGAC_17000 thiC phosphomethylpyrimidine synthase ThiC 0.26 JDDGAC_24890 pheA bifunctional chorismate mutase/prephenate dehydratase low > 86
Escherichia coli ECRC102 0.67 NIAGMN_11125 thiC phosphomethylpyrimidine synthase ThiC 0.26 NIAGMN_18995 pheA bifunctional chorismate mutase/prephenate dehydratase — —
Escherichia coli ECRC100 0.67 OKFHMN_13375 thiC phosphomethylpyrimidine synthase ThiC 0.26 OKFHMN_21225 pheA bifunctional chorismate mutase/prephenate dehydratase low > 80
Escherichia coli BL21 0.67 ECD_03871 phosphomethylpyrimidine synthase 0.26 ECD_02488 chorismate mutase and prephenate dehydratase, P-protein 0.56 26
Escherichia coli ECOR38 0.67 HEPCGN_12010 thiC phosphomethylpyrimidine synthase ThiC 0.27 HEPCGN_20345 pheA bifunctional chorismate mutase/prephenate dehydratase low > 87
Klebsiella michiganensis M5al 0.67 BWI76_RS01555 phosphomethylpyrimidine synthase ThiC 0.25 BWI76_RS21465 bifunctional chorismate mutase/prephenate dehydratase low > 92
Dickeya dadantii 3937 0.67 DDA3937_RS01175 phosphomethylpyrimidine synthase ThiC 0.25 DDA3937_RS16130 bifunctional chorismate mutase/prephenate dehydratase low > 74
Pantoea sp. MT58 0.67 IAI47_18085 phosphomethylpyrimidine synthase ThiC 0.24 IAI47_04410 bifunctional chorismate mutase/prephenate dehydratase low > 76
Erwinia tracheiphila SCR3 0.67 LU632_RS00970 thiC phosphomethylpyrimidine synthase ThiC 0.25 LU632_RS16960 pheA bifunctional chorismate mutase/prephenate dehydratase low > 74
Variovorax sp. SCN45 0.67 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) 0.50 GFF6182 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 127
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_00335 phosphomethylpyrimidine synthase 0.27 CSW01_03680 bifunctional chorismate mutase/prephenate dehydratase low > 62
Alteromonas macleodii MIT1002 0.66 MIT1002_00097 Phosphomethylpyrimidine synthase 0.26 MIT1002_01316 P-protein low > 70
Dickeya dianthicola ME23 0.66 DZA65_RS01215 phosphomethylpyrimidine synthase ThiC 0.25 DZA65_RS17345 bifunctional chorismate mutase/prephenate dehydratase low > 75
Dickeya dianthicola 67-19 0.66 HGI48_RS01170 phosphomethylpyrimidine synthase ThiC 0.25 HGI48_RS16250 bifunctional chorismate mutase/prephenate dehydratase low > 71
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF4626 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.50 GFF5343 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) low > 90
Variovorax sp. OAS795 0.65 ABID97_RS25235 phosphomethylpyrimidine synthase ThiC 0.50 ABID97_RS09515 prephenate dehydratase — —
Acidovorax sp. GW101-3H11 0.65 Ac3H11_2027 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.51 Ac3H11_2574 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.92 11

Not shown: 29 genomes with orthologs for BPHYT_RS13220 only; 4 genomes with orthologs for BPHYT_RS14910 only