Conservation of cofitness between BPHYT_RS18295 and BPHYT_RS13675 in Burkholderia phytofirmans PsJN

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS18295 4-hydroxyphenylpyruvate dioxygenase 1.0 BPHYT_RS13675 succinyl-CoA:3-ketoacid-CoA transferase 0.25 12
Paraburkholderia graminis OAS925 0.97 ABIE53_000012 4-hydroxyphenylpyruvate dioxygenase 0.93 ABIE53_002909 3-oxoacid CoA-transferase subunit A low > 113
Paraburkholderia bryophila 376MFSha3.1 0.96 H281DRAFT_05849 4-hydroxyphenylpyruvate dioxygenase 0.93 H281DRAFT_04495 3-oxoacid CoA-transferase subunit A low > 103
Paraburkholderia sabiae LMG 24235 0.94 QEN71_RS28440 4-hydroxyphenylpyruvate dioxygenase 0.94 QEN71_RS05245 CoA transferase subunit A low > 153
Ralstonia solanacearum PSI07 0.85 RPSI07_RS09575 4-hydroxyphenylpyruvate dioxygenase 0.80 RPSI07_RS15660 CoA transferase subunit A low > 81
Ralstonia solanacearum IBSBF1503 0.84 RALBFv3_RS07685 4-hydroxyphenylpyruvate dioxygenase 0.79 RALBFv3_RS01830 CoA transferase subunit A low > 76
Ralstonia solanacearum UW163 0.84 UW163_RS05940 4-hydroxyphenylpyruvate dioxygenase 0.79 UW163_RS15140 CoA transferase subunit A
Ralstonia sp. UNC404CL21Col 0.84 ABZR87_RS03395 4-hydroxyphenylpyruvate dioxygenase 0.73 ABZR87_RS13770 CoA transferase subunit A low > 80
Ralstonia solanacearum GMI1000 0.84 RS_RS15585 4-hydroxyphenylpyruvate dioxygenase 0.83 RS_RS07905 CoA transferase subunit A low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.78 GFF1741 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) 0.70 GFF5197 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) low > 90
Variovorax sp. OAS795 0.77 ABID97_RS25360 4-hydroxyphenylpyruvate dioxygenase 0.74 ABID97_RS19440 CoA transferase subunit A 0.54 23
Variovorax sp. SCN45 0.77 GFF1962 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) 0.75 GFF7371 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) low > 127
Castellaniella sp019104865 MT123 0.71 ABCV34_RS09775 4-hydroxyphenylpyruvate dioxygenase 0.77 ABCV34_RS00770 CoA transferase subunit A low > 48
Herbaspirillum seropedicae SmR1 0.65 HSERO_RS08335 4-hydroxyphenylpyruvate dioxygenase 0.76 HSERO_RS23190 succinyl-CoA:3-ketoacid-CoA transferase
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_456 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (from data) 0.56 Pf6N2E2_2111 Dehydrocarnitine CoA-transferase and acetoacetate CoA-transferase, subunit A (from data) 0.17 47
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_5003 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) 0.55 Pf1N1B4_5833 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) low > 87
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_26925 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (from data) 0.55 AO353_27935 succinyl-CoA--3-ketoacid-CoA transferase low > 101
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_22845 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (from data) 0.56 AO356_21650 succinyl-CoA--3-ketoacid-CoA transferase low > 104
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_3330 4-hydroxyphenylpyruvate dioxygenase 0.57 Psyr_3237 3-oxoacid CoA-transferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_3330 4-hydroxyphenylpyruvate dioxygenase 0.57 Psyr_3237 3-oxoacid CoA-transferase low > 86
Pseudomonas sp. RS175 0.55 PFR28_02475 4-hydroxyphenylpyruvate dioxygenase 0.56 PFR28_01325 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A 0.44 8
Pseudomonas fluorescens SBW25 0.55 PFLU_RS14610 4-hydroxyphenylpyruvate dioxygenase 0.55 PFLU_RS10585 CoA transferase subunit A low > 109
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS14610 4-hydroxyphenylpyruvate dioxygenase 0.55 PFLU_RS10585 CoA transferase subunit A 0.29 15
Pseudomonas simiae WCS417 0.55 PS417_14005 4-hydroxyphenylpyruvate dioxygenase 0.55 PS417_10525 succinyl-CoA:3-ketoacid-CoA transferase
Cupriavidus basilensis FW507-4G11 0.55 RR42_RS33500 4-hydroxyphenylpyruvate dioxygenase 0.83 RR42_RS06555 3-oxoacid CoA-transferase (EC 2.8.3.5), subunit A (from data) 0.43 16
Pseudomonas putida KT2440 0.55 PP_3433 4-hydroxyphenylpyruvate dioxygenase 0.57 PP_3122 acetoacetyl CoA-transferase (subunit A) 0.27 9
Pseudomonas stutzeri RCH2 0.55 Psest_3514 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (from data) 0.75 Psest_1078 acetyl-CoA:acetoacetate CoA transferase, A subunit (EC 2.8.3.8) (from data) 0.37 28
Kangiella aquimarina DSM 16071 0.54 B158DRAFT_1446 4-hydroxyphenylpyruvate dioxygenase 0.62 B158DRAFT_2505 3-oxoacid CoA-transferase, A subunit low > 40
Acidovorax sp. GW101-3H11 0.54 Ac3H11_1849 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (from data) 0.73 Ac3H11_132 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) 0.28 26
Lysobacter sp. OAE881 0.54 ABIE51_RS04075 4-hydroxyphenylpyruvate dioxygenase 0.79 ABIE51_RS04380 CoA transferase subunit A 0.95 7
Alteromonas macleodii MIT1002 0.53 MIT1002_01553 4-hydroxyphenylpyruvate dioxygenase 0.61 MIT1002_02001 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A low > 70
Rhodopseudomonas palustris CGA009 0.52 TX73_000025 4-hydroxyphenylpyruvate dioxygenase 0.68 TX73_021545 CoA transferase subunit A low > 86
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.578.1 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) 0.76 Xcc-8004.4478.1 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) 0.55 16
Acinetobacter radioresistens SK82 0.49 MPMX26_01476 4-hydroxyphenylpyruvate dioxygenase 0.79 MPMX26_00627 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A
Caulobacter crescentus NA1000 Δfur 0.49 CCNA_02616 4-hydroxyphenylpyruvate dioxygenase 0.68 CCNA_00206 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A low > 67
Caulobacter crescentus NA1000 0.49 CCNA_02616 4-hydroxyphenylpyruvate dioxygenase 0.68 CCNA_00206 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A low > 66
Phaeobacter inhibens DSM 17395 0.46 PGA1_c07610 4-hydroxyphenylpyruvate dioxygenase Hpd 0.63 PGA1_c06210 probable succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A low > 62
Sphingomonas koreensis DSMZ 15582 0.45 Ga0059261_2984 4-hydroxyphenylpyruvate dioxygenase 0.59 Ga0059261_0265 3-oxoacid CoA-transferase, A subunit low > 68
Brevundimonas sp. GW460-12-10-14-LB2 0.44 A4249_RS11200 4-hydroxyphenylpyruvate dioxygenase 0.65 A4249_RS02960 CoA transferase subunit A low > 48
Shewanella oneidensis MR-1 0.42 SO1962 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (from data) 0.63 SO1892 atoD acetate CoA-transferase, subunit A (NCBI ptt file) 0.40 23
Shewanella amazonensis SB2B 0.41 Sama_1568 4-hydroxyphenylpyruvate dioxygenase (RefSeq) 0.59 Sama_1357 3-oxoacid CoA-transferase (EC 2.8.3.5), subunit A (from data) low > 62
Shewanella sp. ANA-3 0.41 Shewana3_2482 4-hydroxyphenylpyruvate dioxygenase (RefSeq) 0.62 Shewana3_1667 3-oxoacid CoA-transferase, A subunit (RefSeq)
Shewanella loihica PV-4 0.41 Shew_2155 4-hydroxyphenylpyruvate dioxygenase (RefSeq) 0.63 Shew_2575 3-oxoacid CoA-transferase, A subunit (RefSeq)
Pontibacter actiniarum KMM 6156, DSM 19842 0.25 CA264_09345 4-hydroxyphenylpyruvate dioxygenase 0.63 CA264_04625 succinyl-CoA--3-ketoacid-CoA transferase low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.23 Echvi_2983 4-hydroxyphenylpyruvate dioxygenase 0.62 Echvi_3272 3-oxoacid CoA-transferase, A subunit low > 79
Mucilaginibacter yixingensis YX-36 DSM 26809 0.22 ABZR88_RS04245 4-hydroxyphenylpyruvate dioxygenase 0.62 ABZR88_RS15870 CoA transferase subunit A low > 71
Pedobacter sp. GW460-11-11-14-LB5 0.19 CA265_RS03130 4-hydroxyphenylpyruvate dioxygenase 0.63 CA265_RS06305 succinyl-CoA--3-ketoacid-CoA transferase low > 88

Not shown: 12 genomes with orthologs for BPHYT_RS18295 only; 7 genomes with orthologs for BPHYT_RS13675 only