Conservation of cofitness between BPHYT_RS14945 and BPHYT_RS12990 in Burkholderia phytofirmans PsJN

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS14945 phosphoglycolate phosphatase 1.0 BPHYT_RS12990 iron transporter 0.28 12
Paraburkholderia bryophila 376MFSha3.1 0.96 H281DRAFT_03931 phosphoglycolate phosphatase 0.98 H281DRAFT_00443 Fe-S cluster biosynthesis and repair protein YggX
Paraburkholderia graminis OAS925 0.95 ABIE53_003164 2-phosphoglycolate phosphatase 0.98 ABIE53_002815 Fe-S cluster biosynthesis and repair protein YggX low > 113
Paraburkholderia sabiae LMG 24235 0.88 QEN71_RS04040 HAD-IA family hydrolase 0.92 QEN71_RS05615 oxidative damage protection protein low > 153
Ralstonia solanacearum IBSBF1503 0.58 RALBFv3_RS13725 phosphoglycolate phosphatase 0.83 RALBFv3_RS15385 oxidative damage protection protein
Ralstonia solanacearum UW163 0.58 UW163_RS16085 phosphoglycolate phosphatase 0.83 UW163_RS12845 oxidative damage protection protein
Ralstonia solanacearum PSI07 0.57 RPSI07_RS19745 phosphoglycolate phosphatase 0.84 RPSI07_RS17970 Fe(2+)-trafficking protein
Ralstonia solanacearum GMI1000 0.57 RS_RS04460 phosphoglycolate phosphatase 0.83 RS_RS06190 Fe(2+)-trafficking protein
Ralstonia sp. UNC404CL21Col 0.57 ABZR87_RS09415 HAD-IA family hydrolase 0.82 ABZR87_RS11010 oxidative damage protection protein low > 80
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS04430 phosphoglycolate phosphatase 0.84 RR42_RS13040 iron transporter low > 128
Acidovorax sp. GW101-3H11 0.53 Ac3H11_2569 Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase 0.72 Ac3H11_580 FIG001341: Probable Fe(2+)-trafficking protein YggX
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS18455 phosphoglycolate phosphatase 0.79 HSERO_RS17325 iron transporter
Variovorax sp. OAS795 0.49 ABID97_RS09545 HAD-IA family hydrolase 0.83 ABID97_RS15460 oxidative damage protection protein
Variovorax sp. SCN45 0.48 GFF6189 Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase 0.84 GFF1246 FIG001341: Probable Fe(2+)-trafficking protein YggX low > 127
Castellaniella sp019104865 MT123 0.44 ABCV34_RS07135 HAD-IA family hydrolase 0.60 ABCV34_RS02400 oxidative damage protection protein low > 48
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF5338 Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase 0.80 GFF4297 FIG001341: Probable Fe(2+)-trafficking protein YggX low > 90
Dechlorosoma suillum PS 0.42 Dsui_1933 2-phosphoglycolate phosphatase 0.74 Dsui_1571 Fe-S cluster protector protein low > 51
Pseudomonas syringae pv. syringae B728a 0.40 Psyr_3651 2-phosphoglycolate phosphatase, prokaryotic:HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hydrolase, subfamily IA, variant 1 0.44 Psyr_4902 Protein of unknown function DUF495
Pseudomonas syringae pv. syringae B728a ΔmexB 0.40 Psyr_3651 2-phosphoglycolate phosphatase, prokaryotic:HAD-superfamily hydrolase, subfamily IA, variant 3:HAD-superfamily hydrolase, subfamily IA, variant 1 0.44 Psyr_4902 Protein of unknown function DUF495 low > 86
Pseudomonas stutzeri RCH2 0.40 Psest_2001 2-phosphoglycolate phosphatase, prokaryotic 0.53 Psest_0144 Fe-S cluster protector protein low > 67
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS08065 N-acetylmuramic acid 6-phosphate phosphatase MupP 0.48 PFLU_RS01585 oxidative damage protection protein low > 109
Pseudomonas fluorescens SBW25 0.38 PFLU_RS08065 N-acetylmuramic acid 6-phosphate phosphatase MupP 0.48 PFLU_RS01585 oxidative damage protection protein low > 109
Pseudomonas fluorescens FW300-N2E2 0.38 Pf6N2E2_2526 Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase 0.49 Pf6N2E2_3847 FIG001341: Probable Fe(2+)-trafficking protein YggX low > 103
Pseudomonas sp. RS175 0.38 PFR28_00900 N-acetylmuramic acid 6-phosphate phosphatase 0.47 PFR28_04924 putative Fe(2+)-trafficking protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_03495 phosphoglycolate phosphatase 0.48 AO356_09835 iron transporter low > 104
Pseudomonas putida KT2440 0.37 PP_1764 Phosphoglycolate phosphatase 2 0.49 PP_0285 Fe(2+)-trafficking protein
Pseudomonas fluorescens FW300-N2E3 0.37 AO353_02100 phosphoglycolate phosphatase 0.45 AO353_12045 iron transporter 0.30 83
Pseudomonas simiae WCS417 0.37 PS417_08095 phosphoglycolate phosphatase 0.49 PS417_01540 iron transporter
Kangiella aquimarina DSM 16071 0.37 B158DRAFT_2318 2-phosphoglycolate phosphatase, prokaryotic 0.56 B158DRAFT_0206 Fe-S cluster protector protein low > 40
Pseudomonas fluorescens FW300-N1B4 0.37 Pf1N1B4_357 Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase 0.45 Pf1N1B4_1632 FIG001341: Probable Fe(2+)-trafficking protein YggX
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.2290.1 Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase 0.52 Xcc-8004.2121.1 FIG001341: Probable Fe(2+)-trafficking protein YggX
Pseudomonas fluorescens GW456-L13 0.35 PfGW456L13_2170 Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase 0.46 PfGW456L13_367 FIG001341: Probable Fe(2+)-trafficking protein YggX low > 87
Marinobacter adhaerens HP15 0.35 HP15_1226 2-phosphoglycolate phosphatase, prokaryotic 0.57 HP15_3016 Ion traffic superfamily protein
Pseudomonas sp. S08-1 0.34 OH686_20840 phosphoglycolate phosphatase, bacterial 0.50 OH686_14545 Probable Fe(2+)-trafficking protein YggX low > 80
Rhodanobacter sp. FW510-T8 0.34 OKGIIK_09515 gph phosphoglycolate phosphatase 0.63 OKGIIK_02560 yggX oxidative damage protection protein low > 52
Lysobacter sp. OAE881 0.34 ABIE51_RS13485 phosphoglycolate phosphatase 0.51 ABIE51_RS15145 oxidative damage protection protein
Acinetobacter radioresistens SK82 0.33 MPMX26_00033 N-acetylmuramic acid 6-phosphate phosphatase 0.47 MPMX26_00184 putative Fe(2+)-trafficking protein low > 36
Dyella japonica UNC79MFTsu3.2 0.32 ABZR86_RS08775 HAD-IA family hydrolase 0.59 ABZR86_RS19970 oxidative damage protection protein low > 74
Rhodanobacter denitrificans FW104-10B01 0.32 LRK54_RS02460 phosphoglycolate phosphatase 0.62 LRK54_RS13320 oxidative damage protection protein low > 59
Shewanella sp. ANA-3 0.32 Shewana3_1970 HAD family hydrolase (RefSeq) 0.50 Shewana3_1180 hypothetical protein (RefSeq) low > 73
Rhodanobacter denitrificans MT42 0.31 LRK55_RS02215 phosphoglycolate phosphatase 0.62 LRK55_RS13060 oxidative damage protection protein low > 63
Shewanella oneidensis MR-1 0.30 SO2414 phosphoglycolate phosphatase, putative (NCBI ptt file) 0.51 SO3369 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.28 Shew_1947 HAD family hydrolase (RefSeq) 0.47 Shew_1122 hypothetical protein (RefSeq)
Shewanella amazonensis SB2B 0.28 Sama_1729 phosphoglycolate phosphatase (RefSeq) 0.55 Sama_2491 hypothetical protein (RefSeq) 0.50 8

Not shown: 5 genomes with orthologs for BPHYT_RS14945 only; 27 genomes with orthologs for BPHYT_RS12990 only