| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Burkholderia phytofirmans PsJN | 1.0 | BPHYT_RS00410 | | LacI family transcription regulator | 1.0 | BPHYT_RS12935 | | chemotaxis protein CheY | 0.24 | 8 |
| Herbaspirillum seropedicae SmR1 | 0.51 | HSERO_RS05460 | | LacI family transcription regulator | 0.68 | HSERO_RS15680 | | chemotaxis protein CheY | low | > 78 |
| Pseudomonas stutzeri RCH2 | 0.45 | Psest_2126 | | Transcriptional regulators | 0.52 | Psest_3932 | | nitrogen regulation protein NR(I) | low | > 67 |
| Acidovorax sp. GW101-3H11 | 0.43 | Ac3H11_3230 | | Gluconate utilization system Gnt-I transcriptional repressor | 0.65 | Ac3H11_4432 | | Nitrogen regulation protein NR(I) | low | > 79 |
| Pseudomonas simiae WCS417 | 0.41 | PS417_21990 | | LacI family transcriptional regulator | 0.53 | PS417_01635 | | nitrogen regulation protein NR(I) | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.41 | PFLU_RS23595 | | LacI family DNA-binding transcriptional regulator | 0.53 | PFLU_RS01685 | | nitrogen regulation protein NR(I) | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.41 | PFLU_RS23595 | | LacI family DNA-binding transcriptional regulator | 0.53 | PFLU_RS01685 | | nitrogen regulation protein NR(I) | low | > 109 |
| Azospirillum sp. SherDot2 | 0.40 | MPMX19_05332 | | HTH-type transcriptional regulator GntR | 0.36 | MPMX19_01112 | | DNA-binding transcriptional regulator NtrC | — | — |
| Pseudomonas sp. RS175 | 0.40 | PFR28_00593 | | HTH-type transcriptional regulator GntR | 0.53 | PFR28_04944 | | DNA-binding transcriptional regulator NtrC | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.40 | AO356_05065 | | LacI family transcriptional regulator | 0.53 | AO356_09730 | | nitrogen regulation protein NR(I) | low | > 104 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.40 | GFF5509 | | Gluconate utilization system Gnt-I transcriptional repressor | 0.68 | GFF5269 | | Nitrogen regulation protein NR(I) | low | > 90 |
| Pseudomonas fluorescens FW300-N2E3 | 0.40 | AO353_03255 | | LacI family transcriptional regulator | 0.52 | AO353_12145 | | nitrogen regulation protein NR(I) | low | > 101 |
| Azospirillum brasilense Sp245 | 0.40 | AZOBR_RS15720 | | LacI family transcription regulator | 0.36 | AZOBR_RS14430 | | chemotaxis protein CheY | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.39 | Psyr_3336 | | transcriptional regulator, LacI family | 0.53 | Psyr_4822 | | Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.39 | Psyr_3336 | | transcriptional regulator, LacI family | 0.53 | Psyr_4822 | | Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) | low | > 86 |
| Pseudomonas fluorescens FW300-N2E2 | 0.39 | Pf6N2E2_2865 | | Gluconate utilization system Gnt-I transcriptional repressor | 0.53 | Pf6N2E2_3826 | | Nitrogen regulation protein NR(I) | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.39 | Pf1N1B4_558 | | Gluconate utilization system Gnt-I transcriptional repressor | 0.53 | Pf1N1B4_1611 | | Nitrogen regulation protein NR(I) | low | > 87 |
| Castellaniella sp019104865 MT123 | 0.39 | ABCV34_RS12285 | | LacI family DNA-binding transcriptional regulator | 0.50 | ABCV34_RS03540 | | nitrogen regulation protein NR(I) | low | > 48 |
| Pseudomonas fluorescens GW456-L13 | 0.39 | PfGW456L13_1925 | | Gluconate utilization system Gnt-I transcriptional repressor | 0.53 | PfGW456L13_347 | | Nitrogen regulation protein NR(I) | low | > 87 |
| Pseudomonas putida KT2440 | 0.39 | PP_3415 | | Transcriptional regulator, LacI family | 0.52 | PP_5048 | | two-component system DNA-binding transcriptional dual regulator GlnL/GlnG | low | > 96 |
| Variovorax sp. SCN45 | 0.33 | GFF7257 | | KEGG: LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor | 0.69 | GFF3066 | | Nitrogen regulation protein NR(I), GlnG (=NtrC) | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.33 | RR42_RS03860 | | transcriptional regulator | 0.71 | RR42_RS12980 | | chemotaxis protein CheY | low | > 128 |
| Paraburkholderia sabiae LMG 24235 | 0.32 | QEN71_RS10090 | | LacI family DNA-binding transcriptional regulator | 0.88 | QEN71_RS05675 | | nitrogen regulation protein NR(I) | low | > 153 |
| Klebsiella michiganensis M5al | 0.32 | BWI76_RS13575 | | sugar binding transcriptional regulator, LacI family protein | 0.51 | BWI76_RS00385 | | nitrogen assimilation regulatory protein | low | > 92 |
| Paraburkholderia graminis OAS925 | 0.31 | ABIE53_005334 | | LacI family gluconate utilization system Gnt-I transcriptional repressor | 0.94 | ABIE53_002804 | | two-component system nitrogen regulation response regulator GlnG | low | > 113 |
| Rahnella sp. WP5 | 0.31 | EX31_RS02290 | | LacI family DNA-binding transcriptional regulator | 0.51 | EX31_RS15880 | | nitrogen regulation protein NR(I) | low | > 89 |
| Pantoea sp. MT58 | 0.31 | IAI47_01650 | | gluconate operon transcriptional repressor GntR | 0.51 | IAI47_00450 | | nitrogen regulation protein NR(I) | low | > 76 |
| Ralstonia sp. UNC404CL21Col | 0.31 | ABZR87_RS18255 | | LacI family DNA-binding transcriptional regulator | 0.72 | ABZR87_RS11070 | | nitrogen regulation protein NR(I) | low | > 80 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.31 | H281DRAFT_03425 | | transcriptional regulator, LacI family | 0.93 | H281DRAFT_00454 | | nitrogen metabolism transcriptional regulator, NtrC, Fis family | — | — |
| Dickeya dadantii 3937 | 0.31 | DDA3937_RS19785 | | gluconate operon transcriptional repressor GntR | 0.52 | DDA3937_RS00125 | | nitrogen regulation protein NR(I) | low | > 74 |
| Dickeya dianthicola 67-19 | 0.31 | HGI48_RS19900 | | gluconate operon transcriptional repressor GntR | 0.52 | HGI48_RS21235 | | nitrogen regulation protein NR(I) | low | > 71 |
| Dickeya dianthicola ME23 | 0.30 | DZA65_RS02690 | | LacI family DNA-binding transcriptional regulator | 0.52 | DZA65_RS22210 | | nitrogen regulation protein NR(I) | low | > 75 |
| Pectobacterium carotovorum WPP14 | 0.30 | HER17_RS16515 | | LacI family DNA-binding transcriptional regulator | 0.52 | HER17_RS21440 | | nitrogen regulation protein NR(I) | low | > 75 |
| Erwinia tracheiphila SCR3 | 0.30 | LU632_RS19160 | gntR | gluconate operon transcriptional repressor GntR | 0.50 | LU632_RS22135 | glnG | nitrogen regulation protein NR(I) | low | > 74 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.30 | GFF406 | | Transcriptional regulator, LacI family | 0.52 | GFF2220 | | Nitrogen regulation protein NR(I) | low | > 78 |
| Vibrio cholerae E7946 ATCC 55056 | 0.30 | CSW01_01485 | | transcriptional regulator | 0.50 | CSW01_13865 | | nitrogen regulation protein NR(I) | low | > 62 |
| Ralstonia solanacearum IBSBF1503 | 0.30 | RALBFv3_RS16125 | | GntR family transcriptional regulator | 0.71 | RALBFv3_RS15540 | | nitrogen regulation protein NR(I) | — | — |
| Ralstonia solanacearum UW163 | 0.30 | UW163_RS16860 | | GntR family transcriptional regulator | 0.71 | UW163_RS13000 | | nitrogen regulation protein NR(I) | — | — |
| Ralstonia solanacearum GMI1000 | 0.29 | RS_RS24865 | | LacI family DNA-binding transcriptional regulator | 0.71 | RS_RS06320 | | nitrogen regulation protein NR(I) | — | — |
| Ralstonia solanacearum PSI07 | 0.29 | RPSI07_RS07575 | | LacI family DNA-binding transcriptional regulator | 0.73 | RPSI07_RS17815 | | nitrogen regulation protein NR(I) | low | > 81 |
| Escherichia coli ECRC98 | 0.29 | JDDGAC_20465 | gntR | gluconate operon transcriptional repressor GntR | 0.52 | JDDGAC_17735 | glnG | nitrogen regulation protein NR(I) | — | — |
| Escherichia coli ECRC100 | 0.29 | OKFHMN_16835 | gntR | gluconate operon transcriptional repressor GntR | 0.52 | OKFHMN_14110 | glnG | nitrogen regulation protein NR(I) | low | > 80 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.29 | OHPLBJKB_00264 | | HTH-type transcriptional regulator GntR | 0.51 | OHPLBJKB_04184 | | DNA-binding transcriptional regulator NtrC | low | > 73 |
| Escherichia coli ECRC102 | 0.29 | NIAGMN_14605 | gntR | gluconate operon transcriptional repressor GntR | 0.52 | NIAGMN_11865 | glnG | nitrogen regulation protein NR(I) | — | — |
| Escherichia coli ECRC62 | 0.29 | BNILDI_02870 | gntR | gluconate operon transcriptional repressor GntR | 0.51 | BNILDI_05290 | glnG | nitrogen regulation protein NR(I) | low | > 75 |
| Escherichia coli ECRC101 | 0.29 | MCAODC_07365 | gntR | gluconate operon transcriptional repressor GntR | 0.52 | MCAODC_04610 | glnG | nitrogen regulation protein NR(I) | low | > 87 |
| Escherichia fergusonii Becca | 0.29 | EFB2_00382 | | HTH-type transcriptional regulator GntR | 0.52 | EFB2_04748 | | DNA-binding transcriptional regulator NtrC | low | > 86 |
| Escherichia coli Nissle 1917 | 0.29 | ECOLIN_RS19675 | | gluconate operon transcriptional repressor GntR | 0.51 | ECOLIN_RS22295 | | nitrogen regulation protein NR(I) | low | > 55 |
| Escherichia coli ECRC99 | 0.29 | KEDOAH_11305 | gntR | gluconate operon transcriptional repressor GntR | 0.52 | KEDOAH_14040 | glnG | nitrogen regulation protein NR(I) | — | — |
| Escherichia coli BW25113 | 0.29 | b3438 | gntR | DNA-binding transcriptional repressor (NCBI) | 0.52 | b3868 | glnG | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein (NCBI) | low | > 76 |
| Escherichia coli ECOR38 | 0.29 | HEPCGN_15660 | gntR | gluconate operon transcriptional repressor GntR | 0.51 | HEPCGN_12740 | glnG | nitrogen regulation protein NR(I) | low | > 87 |
| Enterobacter sp. TBS_079 | 0.29 | MPMX20_03233 | | HTH-type transcriptional regulator GntR | 0.51 | MPMX20_04597 | | DNA-binding transcriptional regulator NtrC | low | > 85 |
| Serratia liquefaciens MT49 | 0.28 | IAI46_23965 | | gluconate operon transcriptional repressor GntR | 0.51 | IAI46_24960 | | nitrogen regulation protein NR(I) | low | > 86 |
| Variovorax sp. OAS795 | 0.28 | ABID97_RS01205 | | LacI family DNA-binding transcriptional regulator | 0.67 | ABID97_RS09945 | | nitrogen regulation protein NR(I) | low | > 91 |
| Escherichia coli ECOR27 | 0.28 | NOLOHH_08635 | gntR | gluconate operon transcriptional repressor GntR | 0.52 | NOLOHH_06240 | glnG | nitrogen regulation protein NR(I) | low | > 75 |
| Enterobacter asburiae PDN3 | 0.28 | EX28DRAFT_4274 | | transcriptional regulator, LacI family | 0.51 | EX28DRAFT_4350 | | nitrogen regulation protein NR(I) | low | > 76 |
| Escherichia coli BL21 | 0.28 | ECD_03289 | | d-gluconate inducible gluconate regulon transcriptional repressor | 0.52 | ECD_03753 | | fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein | low | > 61 |
| Agrobacterium fabrum C58 | 0.27 | Atu4685 | | LacI family transcriptional regulator | 0.38 | Atu1446 | | two component response regulator | low | > 89 |
| Alteromonas macleodii MIT1002 | 0.27 | MIT1002_03475 | | Gluconate utilization system GNT-I transcriptional repressor | 0.52 | MIT1002_03186 | | Nitrogen regulation protein NR(I) | low | > 70 |
| Sinorhizobium meliloti 1021 | 0.26 | SM_b20667 | | LacI family transcriptional regulator | 0.38 | SMc01043 | | nitrogen assimilation regulatory protein | 0.24 | 28 |
| Rhizobium sp. OAE497 | 0.26 | ABIE40_RS04445 | | LacI family DNA-binding transcriptional regulator | 0.38 | ABIE40_RS09090 | | nitrogen regulation protein NR(I) | low | > 107 |
| Rhodanobacter denitrificans FW104-10B01 | 0.19 | LRK54_RS04995 | | LacI family DNA-binding transcriptional regulator | 0.40 | LRK54_RS07980 | | nitrogen regulation protein NR(I) | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.19 | LRK55_RS04775 | | LacI family DNA-binding transcriptional regulator | 0.40 | LRK55_RS07730 | | nitrogen regulation protein NR(I) | low | > 63 |
| Rhodanobacter sp. FW510-T8 | 0.18 | OKGIIK_01750 | purR | LacI family transcriptional regulator | 0.39 | OKGIIK_14465 | ntrC | nitrogen regulation protein NR(I) | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.17 | Xcc-8004.3387.1 | | transcriptional regulator | 0.41 | Xcc-8004.252.1 | | Nitrogen regulation protein NtrC | low | > 74 |
Not shown: 3 genomes with orthologs for BPHYT_RS00410 only; 18 genomes with orthologs for BPHYT_RS12935 only