Conservation of cofitness between BPHYT_RS13220 and BPHYT_RS08955 in Burkholderia phytofirmans PsJN

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS13220 phosphomethylpyrimidine synthase 1.0 BPHYT_RS08955 homoserine dehydrogenase 0.68 16
Paraburkholderia graminis OAS925 0.99 ABIE53_002857 phosphomethylpyrimidine synthase 0.95 ABIE53_002026 homoserine dehydrogenase — —
Paraburkholderia bryophila 376MFSha3.1 0.98 H281DRAFT_00395 hydroxymethylpyrimidine synthase 0.98 H281DRAFT_00810 homoserine dehydrogenase — —
Paraburkholderia sabiae LMG 24235 0.95 QEN71_RS05480 phosphomethylpyrimidine synthase ThiC 0.94 QEN71_RS22405 homoserine dehydrogenase 0.80 31
Herbaspirillum seropedicae SmR1 0.85 HSERO_RS02120 phosphomethylpyrimidine synthase ThiC 0.73 HSERO_RS10460 homoserine dehydrogenase low > 78
Dechlorosoma suillum PS 0.85 Dsui_0422 thiamine biosynthesis protein ThiC 0.72 Dsui_2907 homoserine dehydrogenase — —
Castellaniella sp019104865 MT123 0.78 ABCV34_RS10825 phosphomethylpyrimidine synthase ThiC 0.58 ABCV34_RS02295 homoserine dehydrogenase low > 48
Marinobacter adhaerens HP15 0.75 HP15_453 thiamine biosynthesis protein thiC 0.54 HP15_764 homoserine dehydrogenase — —
Pseudomonas putida KT2440 0.75 PP_4922 Phosphomethylpyrimidine synthase 0.64 PP_1470 Homoserine dehydrogenase — —
Pseudomonas sp. S08-1 0.74 OH686_15885 phosphomethylpyrimidine synthase 0.63 OH686_17760 Homoserine dehydrogenase low > 80
Pseudomonas stutzeri RCH2 0.74 Psest_0477 thiamine biosynthesis protein ThiC 0.64 Psest_3126 Homoserine dehydrogenase — —
Pseudomonas fluorescens FW300-N2E2 0.74 Pf6N2E2_3644 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.63 Pf6N2E2_3143 Homoserine dehydrogenase (EC 1.1.1.3) — —
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_13010 thiamine biosynthesis protein ThiC 0.63 AO353_04355 homoserine dehydrogenase low > 101
Pseudomonas fluorescens FW300-N2C3 0.74 AO356_08810 thiamine biosynthesis protein ThiC 0.63 AO356_06375 homoserine dehydrogenase — —
Pseudomonas sp. RS175 0.74 PFR28_05091 Phosphomethylpyrimidine synthase 0.63 PFR28_00333 Homoserine dehydrogenase — —
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_1447 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.63 Pf1N1B4_3013 Homoserine dehydrogenase (EC 1.1.1.3) — —
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_187 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.63 PfGW456L13_1723 Homoserine dehydrogenase (EC 1.1.1.3) — —
Pseudomonas fluorescens SBW25 0.73 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC 0.64 PFLU_RS24550 homoserine dehydrogenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS02430 phosphomethylpyrimidine synthase ThiC 0.64 PFLU_RS24550 homoserine dehydrogenase — —
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_0544 hydroxymethylpyrimidine synthase 0.64 Psyr_1290 homoserine dehydrogenase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_0544 hydroxymethylpyrimidine synthase 0.64 Psyr_1290 homoserine dehydrogenase — —
Pseudomonas simiae WCS417 0.73 PS417_02355 thiamine biosynthesis protein ThiC 0.64 PS417_22885 homoserine dehydrogenase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.72 CA264_20435 phosphomethylpyrimidine synthase ThiC 0.21 CA264_02380 homoserine dehydrogenase low > 74
Acinetobacter radioresistens SK82 0.71 MPMX26_00180 Phosphomethylpyrimidine synthase 0.50 MPMX26_00167 Homoserine dehydrogenase — —
Ralstonia solanacearum PSI07 0.69 RPSI07_RS23420 phosphomethylpyrimidine synthase ThiC 0.74 RPSI07_RS17490 homoserine dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.68 ABZR87_RS04785 phosphomethylpyrimidine synthase ThiC 0.75 ABZR87_RS11445 homoserine dehydrogenase — —
Cupriavidus basilensis FW507-4G11 0.68 RR42_RS01290 thiamine biosynthesis protein ThiC 0.77 RR42_RS12540 homoserine dehydrogenase — —
Ralstonia solanacearum UW163 0.68 UW163_RS03640 phosphomethylpyrimidine synthase ThiC 0.74 UW163_RS13320 homoserine dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.68 RALBFv3_RS09940 phosphomethylpyrimidine synthase ThiC 0.74 RALBFv3_RS15875 homoserine dehydrogenase — —
Ralstonia solanacearum GMI1000 0.68 RS_RS00555 phosphomethylpyrimidine synthase 0.72 RS_RS06655 homoserine dehydrogenase — —
Variovorax sp. SCN45 0.67 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) 0.71 GFF2801 Homoserine dehydrogenase (EC 1.1.1.3) 0.60 77
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF4626 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.72 GFF3935 Homoserine dehydrogenase (EC 1.1.1.3) — —
Acidovorax sp. GW101-3H11 0.65 Ac3H11_2027 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) 0.71 Ac3H11_1507 Homoserine dehydrogenase (EC 1.1.1.3) low > 79
Variovorax sp. OAS795 0.65 ABID97_RS25235 phosphomethylpyrimidine synthase ThiC 0.71 ABID97_RS10890 homoserine dehydrogenase — —
Azospirillum brasilense Sp245 0.64 AZOBR_RS07940 phosphomethylpyrimidine synthase 0.42 AZOBR_RS07835 homoserine dehydrogenase — —
Magnetospirillum magneticum AMB-1 0.63 AMB_RS01125 phosphomethylpyrimidine synthase 0.36 AMB_RS18865 homoserine dehydrogenase — —
Phaeobacter inhibens DSM 17395 0.62 PGA1_c09110 thiamine biosynthesis protein ThiC 0.32 PGA1_c08650 homoserine dehydrogenase Hom — —
Sinorhizobium meliloti 1021 0.62 SM_b20615 thiamine biosynthesis protein ThiC 0.38 SMc00293 homoserine dehydrogenase low > 103
Sphingomonas koreensis DSMZ 15582 0.62 Ga0059261_2424 hydroxymethylpyrimidine synthase 0.35 Ga0059261_2711 homoserine dehydrogenase (EC 1.1.1.3) (from data) 0.88 48
Dinoroseobacter shibae DFL-12 0.62 Dshi_4080 thiamine biosynthesis protein ThiC (RefSeq) 0.36 Dshi_2273 Homoserine dehydrogenase (RefSeq) — —
Agrobacterium fabrum C58 0.62 Atu2569 thiamine biosynthesis protein 0.38 Atu1588 homoserine dehydrogenase 0.63 65
Caulobacter crescentus NA1000 Δfur 0.61 CCNA_02109 thiamine biosynthesis protein thiC 0.29 CCNA_01447 homoserine dehydrogenase — —
Caulobacter crescentus NA1000 0.61 CCNA_02109 thiamine biosynthesis protein thiC 0.29 CCNA_01447 homoserine dehydrogenase low > 66
Bosea sp. OAE506 0.60 ABIE41_RS02770 phosphomethylpyrimidine synthase ThiC 0.37 ABIE41_RS19165 homoserine dehydrogenase low > 77
Rhodopseudomonas palustris CGA009 0.60 TX73_018540 phosphomethylpyrimidine synthase ThiC 0.32 TX73_012940 homoserine dehydrogenase — —
Azospirillum sp. SherDot2 0.60 MPMX19_00336 Phosphomethylpyrimidine synthase 0.43 MPMX19_00805 Homoserine dehydrogenase — —
Rhodospirillum rubrum S1H 0.57 Rru_A2008 Thiamine biosynthesis protein ThiC (NCBI) 0.39 Rru_A2410 Homoserine dehydrogenase (NCBI) low > 58
Mycobacterium tuberculosis H37Rv 0.51 Rv0423c Probable thiamine biosynthesis protein ThiC 0.27 Rv1294 Probable homoserine dehydrogenase ThrA — —

Not shown: 46 genomes with orthologs for BPHYT_RS13220 only; 5 genomes with orthologs for BPHYT_RS08955 only