Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Kangiella aquimarina DSM 16071 | 1.0 | B158DRAFT_2314 | | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) | 1.0 | B158DRAFT_1324 | | heme exporter protein CcmB | 0.88 | 11 |
Shewanella loihica PV-4 | 0.59 | Shew_2409 | | short chain dehydrogenase (RefSeq) | 0.42 | Shew_0189 | | heme exporter protein CcmB (RefSeq) | — | — |
Pseudomonas stutzeri RCH2 | 0.56 | Psest_2000 | | Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) | 0.23 | Psest_1755 | | heme exporter protein CcmB | — | — |
Pseudomonas fluorescens GW456-L13 | 0.55 | PfGW456L13_2169 | | Oxidoreductase, short chain dehydrogenase/reductase family | 0.24 | PfGW456L13_4315 | | ABC transporter involved in cytochrome c biogenesis, CcmB subunit | — | — |
Shewanella amazonensis SB2B | 0.55 | Sama_2121 | | short chain dehydrogenase (RefSeq) | 0.47 | Sama_0244 | | heme exporter protein CcmB (RefSeq) | 0.66 | 14 |
Pseudomonas fluorescens FW300-N2E3 | 0.55 | AO353_02105 | | 3-oxoacyl-ACP reductase | 0.24 | AO353_18855 | | heme transporter | — | — |
Pseudomonas fluorescens FW300-N1B4 | 0.55 | Pf1N1B4_358 | | Oxidoreductase, short chain dehydrogenase/reductase family | 0.23 | Pf1N1B4_3640 | | ABC transporter involved in cytochrome c biogenesis, CcmB subunit | — | — |
Vibrio cholerae E7946 ATCC 55056 | 0.55 | CSW01_05390 | | YciK family oxidoreductase | 0.35 | CSW01_10285 | | heme exporter protein CcmB | 0.52 | 53 |
Pseudomonas fluorescens FW300-N2C3 | 0.54 | AO356_03500 | | 3-oxoacyl-ACP reductase | 0.25 | AO356_03655 | | heme transporter | — | — |
Marinobacter adhaerens HP15 | 0.54 | HP15_1225 | | oxidoreductase, short chain dehydrogenase/reductase family | 0.41 | HP15_2285 | | cytochrome c-type biogenesis protein CcmB | — | — |
Pseudomonas simiae WCS417 | 0.54 | PS417_08090 | | 3-oxoacyl-ACP reductase | 0.25 | PS417_08695 | | heme transporter | — | — |
Pseudomonas fluorescens SBW25 | 0.54 | PFLU_RS08060 | | YciK family oxidoreductase | 0.23 | PFLU_RS08650 | | heme exporter protein CcmB | low | > 109 |
Pseudomonas fluorescens SBW25-INTG | 0.54 | PFLU_RS08060 | | YciK family oxidoreductase | 0.23 | PFLU_RS08650 | | heme exporter protein CcmB | low | > 109 |
Shewanella oneidensis MR-1 | 0.54 | SO2935 | | oxidoreductase, short-chain dehydrogenase/reductase family (NCBI ptt file) | 0.47 | SO0262 | ccmB | heme exporter protein CcmB (NCBI ptt file) | low | > 76 |
Pseudomonas fluorescens FW300-N2E2 | 0.53 | Pf6N2E2_2527 | | Oxidoreductase, short chain dehydrogenase/reductase family | 0.25 | Pf6N2E2_2559 | | ABC transporter involved in cytochrome c biogenesis, CcmB subunit | — | — |
Shewanella sp. ANA-3 | 0.53 | Shewana3_1528 | | short chain dehydrogenase (RefSeq) | 0.47 | Shewana3_0230 | | heme exporter protein CcmB (RefSeq) | low | > 73 |
Alteromonas macleodii MIT1002 | 0.53 | MIT1002_01965 | | putative oxidoreductase YciK | 0.30 | MIT1002_00961 | | Cytochrome c-type biogenesis protein CcmB | — | — |
Pseudomonas sp. RS175 | 0.52 | PFR28_00899 | | putative oxidoreductase YciK | 0.25 | PFR28_00866 | | Heme exporter protein B | — | — |
Pseudomonas sp. S08-1 | 0.52 | OH686_20835 | | Oxidoreductase, short-chain dehydrogenase/reductase family | 0.25 | OH686_02655 | | heme exporter protein CcmB | — | — |
Pseudomonas putida KT2440 | 0.51 | PP_1763 | | putative oxidoreductase | 0.24 | PP_4326 | | protoheme IX ABC transporter - permease subunit | — | — |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.50 | GFF2717 | | YciK-like oxidoreductase | 0.36 | GFF4881 | | ABC transporter involved in cytochrome c biogenesis, CcmB subunit | — | — |
Escherichia coli Nissle 1917 | 0.49 | ECOLIN_RS07645 | | YciK family oxidoreductase | 0.35 | ECOLIN_RS12855 | | heme exporter protein CcmB | — | — |
Escherichia fergusonii Becca | 0.49 | EFB2_02656 | | putative oxidoreductase YciK | 0.35 | EFB2_01656 | | Heme exporter protein B | low | > 86 |
Escherichia coli BL21 | 0.48 | ECD_01247 | | putative EmrKY-TolC system oxoacyl-(acyl carrier protein) reductase | 0.35 | ECD_02127 | | heme export ABC transporter permease | low | > 61 |
Escherichia coli BW25113 | 0.48 | b1271 | yciK | short chain dehydrogenase (NCBI) | 0.35 | b2200 | ccmB | heme exporter subunit (NCBI) | low | > 76 |
Escherichia coli ECRC62 | 0.48 | BNILDI_18435 | yciK | YciK family oxidoreductase | 0.35 | BNILDI_13780 | ccmB | heme exporter protein CcmB | low | > 75 |
Escherichia coli ECOR27 | 0.48 | NOLOHH_20285 | yciK | YciK family oxidoreductase | 0.35 | NOLOHH_14860 | ccmB | heme exporter protein CcmB | low | > 75 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.48 | OHPLBJKB_02413 | | putative oxidoreductase YciK | 0.35 | OHPLBJKB_01511 | | Heme exporter protein B | low | > 73 |
Escherichia coli ECRC102 | 0.48 | NIAGMN_26790 | yciK | YciK family oxidoreductase | 0.35 | NIAGMN_21050 | ccmB | heme exporter protein CcmB | — | — |
Escherichia coli ECRC99 | 0.48 | KEDOAH_26145 | yciK | YciK family oxidoreductase | 0.35 | KEDOAH_04900 | ccmB | heme exporter protein CcmB | — | — |
Escherichia coli ECRC100 | 0.48 | OKFHMN_02620 | yciK | YciK family oxidoreductase | 0.35 | OKFHMN_23285 | ccmB | heme exporter protein CcmB | low | > 80 |
Escherichia coli ECRC98 | 0.48 | JDDGAC_05165 | yciK | YciK family oxidoreductase | 0.35 | JDDGAC_27245 | ccmB | heme exporter protein CcmB | low | > 86 |
Escherichia coli ECRC101 | 0.48 | MCAODC_15645 | yciK | YciK family oxidoreductase | 0.35 | MCAODC_14335 | ccmB | heme exporter protein CcmB | low | > 87 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.48 | Psyr_3652 | | Short-chain dehydrogenase/reductase SDR | 0.22 | Psyr_3392 | | Cytochrome c-type biogenesis protein CcmB | — | — |
Pseudomonas syringae pv. syringae B728a | 0.48 | Psyr_3652 | | Short-chain dehydrogenase/reductase SDR | 0.22 | Psyr_3392 | | Cytochrome c-type biogenesis protein CcmB | — | — |
Escherichia coli ECOR38 | 0.48 | HEPCGN_25580 | yciK | YciK family oxidoreductase | 0.35 | HEPCGN_22550 | ccmB | heme exporter protein CcmB | low | > 87 |
Pantoea sp. MT58 | 0.47 | IAI47_09220 | | YciK family oxidoreductase | 0.29 | IAI47_06070 | | heme exporter protein CcmB | low | > 76 |
Rahnella sp. WP5 | 0.47 | EX31_RS09910 | | YciK family oxidoreductase | 0.32 | EX31_RS19765 | | heme exporter protein CcmB | low | > 89 |
Pectobacterium carotovorum WPP14 | 0.46 | HER17_RS10890 | | YciK family oxidoreductase | 0.31 | HER17_RS09035 | | heme exporter protein CcmB | low | > 75 |
Serratia liquefaciens MT49 | 0.46 | IAI46_13985 | | YciK family oxidoreductase | 0.40 | IAI46_18105 | | heme exporter protein CcmB | low | > 86 |
Rhodospirillum rubrum S1H | 0.34 | Rru_A0403 | | Short-chain dehydrogenase/reductase SDR (NCBI) | 0.34 | Rru_A0039 | | Cytochrome c-type biogenesis protein CcmB (NCBI) | — | — |
Rhodanobacter sp. FW510-T8 | 0.34 | OKGIIK_03065 | yqjQ | Short-chain dehydrogenase | 0.20 | OKGIIK_08565 | ccmB | heme exporter protein CcmB | — | — |
Rhodanobacter denitrificans FW104-10B01 | 0.33 | LRK54_RS13830 | | SDR family NAD(P)-dependent oxidoreductase | 0.19 | LRK54_RS16085 | | heme exporter protein CcmB | — | — |
Rhodanobacter denitrificans MT42 | 0.33 | LRK55_RS13545 | | SDR family NAD(P)-dependent oxidoreductase | 0.19 | LRK55_RS15835 | | heme exporter protein CcmB | — | — |
Agrobacterium fabrum C58 | 0.33 | Atu1074 | | NAD/NADP dependent oxidoreductase | 0.28 | Atu2687 | | ABC transporter, membrane spanning protein (heme) | — | — |
Caulobacter crescentus NA1000 | 0.31 | CCNA_01728 | | short chain dehydrogenase | 0.19 | CCNA_03783 | | cytochrome c biogenesis ABC transporter permease component CcmB | low | > 66 |
Caulobacter crescentus NA1000 Δfur | 0.31 | CCNA_01728 | | short chain dehydrogenase | 0.19 | CCNA_03783 | | cytochrome c biogenesis ABC transporter permease component CcmB | low | > 67 |
Azospirillum brasilense Sp245 | 0.31 | AZOBR_RS08305 | | oxidoreductase | 0.27 | AZOBR_RS00710 | | heme ABC transporter permease | — | — |
Dyella japonica UNC79MFTsu3.2 | 0.31 | ABZR86_RS09815 | | SDR family NAD(P)-dependent oxidoreductase | 0.20 | ABZR86_RS06425 | | heme exporter protein CcmB | — | — |
Rhizobium sp. OAE497 | 0.31 | ABIE40_RS06265 | | SDR family NAD(P)-dependent oxidoreductase | 0.29 | ABIE40_RS18285 | | heme exporter protein CcmB | low | > 107 |
Azospirillum sp. SherDot2 | 0.29 | MPMX19_00907 | | putative oxidoreductase YciK | 0.31 | MPMX19_02463 | | Heme exporter protein B | — | — |
Sinorhizobium meliloti 1021 | 0.29 | SMc00553 | | oxidoreductase | 0.29 | SMc03848 | | heme exporter B (cytochrome C-type biogenesis protein) transmembrane | — | — |
Lysobacter sp. OAE881 | 0.29 | ABIE51_RS15375 | | SDR family NAD(P)-dependent oxidoreductase | 0.29 | ABIE51_RS08720 | | heme exporter protein CcmB | low | > 62 |
Rhodopseudomonas palustris CGA009 | 0.28 | TX73_015995 | | SDR family NAD(P)-dependent oxidoreductase | 0.33 | TX73_001055 | | heme exporter protein CcmB | — | — |
Brevundimonas sp. GW460-12-10-14-LB2 | 0.28 | A4249_RS03730 | | SDR family NAD(P)-dependent oxidoreductase | 0.19 | A4249_RS12780 | | heme exporter protein CcmB | — | — |
Bosea sp. OAE506 | 0.28 | ABIE41_RS17815 | | SDR family NAD(P)-dependent oxidoreductase | 0.27 | ABIE41_RS04975 | | heme exporter protein CcmB | — | — |
Magnetospirillum magneticum AMB-1 | 0.27 | AMB_RS10540 | | KR domain-containing protein | 0.32 | AMB_RS21150 | | heme exporter protein CcmB | — | — |
Sphingomonas koreensis DSMZ 15582 | 0.26 | Ga0059261_3625 | | Short-chain dehydrogenases of various substrate specificities | 0.22 | Ga0059261_1996 | | ABC-type transport system involved in cytochrome c biogenesis, permease component | — | — |
Xanthomonas campestris pv. campestris strain 8004 | 0.25 | Xcc-8004.2015.1 | | Short chain dehydrogenase | 0.30 | Xcc-8004.2346.1 | | ABC transporter involved in cytochrome c biogenesis, CcmB subunit | low | > 74 |
Dinoroseobacter shibae DFL-12 | 0.20 | Dshi_2135 | | short-chain dehydrogenase/reductase SDR (RefSeq) | 0.21 | Dshi_1854 | | heme exporter protein CcmB (RefSeq) | — | — |
Not shown: 8 genomes with orthologs for B158DRAFT_2314 only; 2 genomes with orthologs for B158DRAFT_1324 only