Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Agrobacterium fabrum C58 | 1.0 | Atu2766 | | NAD-glutamate dehydrogenase | 1.0 | Atu4418 | | glutaryl-CoA dehydrogenase | 0.31 | 5 |
Rhizobium sp. OAE497 | 0.69 | ABIE40_RS19120 | | NAD-glutamate dehydrogenase | 0.92 | ABIE40_RS24040 | | acyl-CoA dehydrogenase | low | > 107 |
Sinorhizobium meliloti 1021 | 0.64 | SMc04085 | | hypothetical protein | 0.83 | SM_b21181 | | glutaryl-CoA dehydrogenase | 0.39 | 16 |
Bosea sp. OAE506 | 0.43 | ABIE41_RS04780 | | NAD-glutamate dehydrogenase | 0.82 | ABIE41_RS23880 | | acyl-CoA dehydrogenase | low | > 77 |
Xanthobacter sp. DMC5 | 0.41 | GFF3560 | | NAD-specific glutamate dehydrogenase | 0.71 | GFF270 | | Acyl-CoA dehydrogenase | — | — |
Azospirillum brasilense Sp245 | 0.37 | AZOBR_RS00190 | | L-glutamate dehydrogenase (NAD+) (EC 1.4.1.2) (from data) | 0.69 | AZOBR_RS19670 | | acyl-CoA dehydrogenase | 0.38 | 22 |
Azospirillum sp. SherDot2 | 0.36 | MPMX19_04621 | | NAD-specific glutamate dehydrogenase | 0.72 | MPMX19_05494 | | Acyl-CoA dehydrogenase | low | > 112 |
Ralstonia sp. UNC404CL21Col | 0.35 | ABZR87_RS22605 | | NAD-glutamate dehydrogenase | 0.68 | ABZR87_RS09100 | | acyl-CoA dehydrogenase | low | > 80 |
Lysobacter sp. OAE881 | 0.35 | ABIE51_RS09105 | | NAD-glutamate dehydrogenase domain-containing protein | 0.46 | ABIE51_RS12565 | | acyl-CoA dehydrogenase family protein | 0.76 | 4 |
Cupriavidus basilensis FW507-4G11 | 0.34 | RR42_RS07270 | | NAD-glutamate dehydrogenase | 0.68 | RR42_RS15400 | | acyl-CoA dehydrogenase | low | > 128 |
Burkholderia phytofirmans PsJN | 0.34 | BPHYT_RS22475 | | NAD-glutamate dehydrogenase | 0.69 | BPHYT_RS03780 | | acyl-CoA dehydrogenase | low | > 109 |
Ralstonia solanacearum UW163 | 0.34 | UW163_RS18785 | | NAD-glutamate dehydrogenase | 0.68 | UW163_RS00540 | | acyl-CoA dehydrogenase | — | — |
Ralstonia solanacearum IBSBF1503 | 0.34 | RALBFv3_RS20390 | | NAD-glutamate dehydrogenase | 0.68 | RALBFv3_RS13025 | | acyl-CoA dehydrogenase | low | > 76 |
Paraburkholderia graminis OAS925 | 0.34 | ABIE53_004113 | | glutamate dehydrogenase | 0.69 | ABIE53_000899 | | glutaryl-CoA dehydrogenase | 0.16 | 98 |
Rhodospirillum rubrum S1H | 0.34 | Rru_A3663 | | NAD-glutamate dehydrogenase (NCBI) | 0.68 | Rru_A2005 | | Glutaryl-CoA dehydrogenase (NCBI) | low | > 58 |
Paraburkholderia bryophila 376MFSha3.1 | 0.34 | H281DRAFT_03183 | | glutamate dehydrogenase (NAD) | 0.69 | H281DRAFT_04737 | | glutaryl-CoA dehydrogenase | low | > 103 |
Magnetospirillum magneticum AMB-1 | 0.34 | AMB_RS00165 | | NAD-glutamate dehydrogenase | 0.72 | AMB_RS16315 | | acyl-CoA dehydrogenase | low | > 64 |
Pseudomonas putida KT2440 | 0.34 | PP_2080 | | NAD-specific glutamate dehydrogenase | 0.69 | PP_0158 | | glutaryl-CoA dehydrogenase | low | > 96 |
Pseudomonas sp. S08-1 | 0.34 | OH686_22265 | | NAD-specific glutamate dehydrogenase , large form | 0.69 | OH686_11700 | | Glutaryl-CoA dehydrogenase | 0.83 | 17 |
Pseudomonas sp. BP01 | 0.34 | JOY50_RS22180 | | NAD-glutamate dehydrogenase | 0.69 | JOY50_RS20925 | | acyl-CoA dehydrogenase | low | > 84 |
Ralstonia solanacearum PSI07 | 0.34 | RPSI07_RS18780 | | NAD-glutamate dehydrogenase | 0.68 | RPSI07_RS20200 | | acyl-CoA dehydrogenase | low | > 81 |
Xanthomonas campestris pv. campestris strain 8004 | 0.34 | Xcc-8004.2182.1 | | NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form | 0.45 | Xcc-8004.3490.1 | | Glutaryl-CoA dehydrogenase (EC 1.3.99.7) | low | > 74 |
Pseudomonas sp. SVBP6 | 0.33 | COO64_RS05395 | | NAD-glutamate dehydrogenase | 0.69 | COO64_RS02655 | | acyl-CoA dehydrogenase | low | > 93 |
Pseudomonas stutzeri RCH2 | 0.33 | Psest_1944 | | NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form (from data) | 0.68 | Psest_3830 | | Acyl-CoA dehydrogenases | low | > 67 |
Pseudomonas fluorescens FW300-N2E2 | 0.33 | Pf6N2E2_634 | | NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form | 0.69 | Pf6N2E2_4036 | | Glutaryl-CoA dehydrogenase (EC 1.3.99.7) | low | > 103 |
Paraburkholderia sabiae LMG 24235 | 0.33 | QEN71_RS20065 | | NAD-glutamate dehydrogenase | 0.68 | QEN71_RS26180 | | acyl-CoA dehydrogenase | low | > 153 |
Shewanella loihica PV-4 | 0.33 | Shew_1809 | | NAD-glutamate dehydrogenase (RefSeq) | 0.71 | Shew_0900 | | acyl-CoA dehydrogenase domain-containing protein (RefSeq) | low | > 60 |
Pseudomonas simiae WCS417 | 0.33 | PS417_15075 | | NAD-glutamate dehydrogenase | 0.69 | PS417_00580 | | acyl-CoA dehydrogenase | low | > 88 |
Pseudomonas lactucae CFBP13502 | 0.33 | GEMAOFIL_03315 | | NAD-specific glutamate dehydrogenase | 0.69 | GEMAOFIL_00318 | | Acyl-CoA dehydrogenase | low | > 93 |
Pseudomonas fluorescens FW300-N2C3 | 0.33 | AO356_24705 | | NAD-glutamate dehydrogenase | 0.69 | AO356_10850 | | acyl-CoA dehydrogenase | 0.27 | 44 |
Pseudomonas sp. RS175 | 0.33 | PFR28_01602 | | NAD-specific glutamate dehydrogenase | 0.69 | PFR28_04728 | | Acyl-CoA dehydrogenase | 0.36 | 40 |
Pseudomonas fluorescens SBW25 | 0.33 | PFLU_RS17095 | | NAD-glutamate dehydrogenase | 0.69 | PFLU_RS00565 | | acyl-CoA dehydrogenase | low | > 109 |
Pseudomonas fluorescens SBW25-INTG | 0.33 | PFLU_RS17095 | | NAD-glutamate dehydrogenase | 0.69 | PFLU_RS00565 | | acyl-CoA dehydrogenase | low | > 109 |
Shewanella amazonensis SB2B | 0.33 | Sama_1592 | | hypothetical protein (RefSeq) | 0.71 | Sama_2796 | | acyl-CoA dehydrogenase-like protein (RefSeq) | low | > 62 |
Pseudomonas sp. DMC3 | 0.33 | GFF3012 | | NAD-specific glutamate dehydrogenase | 0.68 | GFF688 | | Acyl-CoA dehydrogenase | low | > 89 |
Pseudomonas fluorescens FW300-N2E3 | 0.33 | AO353_22820 | | NAD-glutamate dehydrogenase | 0.68 | AO353_11100 | | acyl-CoA dehydrogenase | low | > 101 |
Marinobacter adhaerens HP15 | 0.33 | HP15_2269 | | NAD-specific glutamate dehydrogenase | 0.61 | HP15_3936 | | acyl-CoA dehydrogenase domain protein | low | > 73 |
Pseudomonas syringae pv. syringae B728a | 0.33 | Psyr_1724 | | glutamate dehydrogenase (NAD) | 0.69 | Psyr_5014 | | Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal | low | > 86 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.33 | Psyr_1724 | | glutamate dehydrogenase (NAD) | 0.69 | Psyr_5014 | | Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal | low | > 86 |
Pseudomonas fluorescens FW300-N1B4 | 0.33 | Pf1N1B4_4643 | | NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form | 0.69 | Pf1N1B4_1816 | | Glutaryl-CoA dehydrogenase (EC 1.3.99.7) | low | > 87 |
Pseudomonas aeruginosa PA14 | 0.33 | IKLFDK_15595 | | NAD-specific glutamate dehydrogenase | 0.69 | IKLFDK_23195 | | acyl-CoA dehydrogenase | low | > 100 |
Pseudomonas fluorescens GW456-L13 | 0.33 | PfGW456L13_3298 | | NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form | 0.69 | PfGW456L13_554 | | Glutaryl-CoA dehydrogenase (EC 1.3.99.7) | 0.60 | 9 |
Kangiella aquimarina DSM 16071 | 0.32 | B158DRAFT_0998 | | NAD-specific glutamate dehydrogenase | 0.70 | B158DRAFT_1734 | | Acyl-CoA dehydrogenases | low | > 40 |
Rhodanobacter sp. FW510-T8 | 0.32 | OKGIIK_09160 | gdh2 | NAD-specific glutamate dehydrogenase | 0.46 | OKGIIK_09135 | caiA | acyl-CoA dehydrogenase | low | > 52 |
Dyella japonica UNC79MFTsu3.2 | 0.32 | ABZR86_RS07560 | | NAD-glutamate dehydrogenase domain-containing protein | 0.45 | ABZR86_RS07535 | | acyl-CoA dehydrogenase family protein | low | > 74 |
Rhodanobacter sp000427505 FW510-R12 | 0.32 | LRK53_RS07945 | | NAD-glutamate dehydrogenase | 0.45 | LRK53_RS07975 | | acyl-CoA dehydrogenase family protein | low | > 59 |
Rhodanobacter denitrificans FW104-10B01 | 0.32 | LRK54_RS02090 | | NAD-glutamate dehydrogenase | 0.46 | LRK54_RS02070 | | acyl-CoA dehydrogenase family protein | low | > 59 |
Rhodanobacter denitrificans MT42 | 0.32 | LRK55_RS01865 | | NAD-glutamate dehydrogenase | 0.46 | LRK55_RS01845 | | acyl-CoA dehydrogenase family protein | low | > 63 |
Sphingomonas koreensis DSMZ 15582 | 0.28 | Ga0059261_1252 | | NAD-specific glutamate dehydrogenase | 0.75 | Ga0059261_2164 | | Acyl-CoA dehydrogenases | — | — |
Mycobacterium tuberculosis H37Rv | 0.27 | Rv2476c | | Probable NAD-dependent glutamate dehydrogenase Gdh (NAD-Gdh) (NAD-dependent glutamic dehydrogenase) | 0.44 | Rv0400c | | Acyl-CoA dehydrogenase FadE7 | low | > 58 |
Not shown: 8 genomes with orthologs for Atu2766 only; 17 genomes with orthologs for Atu4418 only