Conservation of cofitness between Atu0528 and Atu4292 in Agrobacterium fabrum C58

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu0528 large conductance mechanosensitive channel protein 1.0 Atu4292 chloramphenicol resistance protein 0.18 10
Sinorhizobium meliloti 1021 0.72 SMc02250 large-conductance mechanosensitive channel 0.88 SM_b20071 efflux protein low > 103
Rhizobium sp. OAE497 0.70 ABIE40_RS02640 large conductance mechanosensitive channel protein MscL 0.81 ABIE40_RS15830 MFS transporter low > 107
Herbaspirillum seropedicae SmR1 0.57 HSERO_RS20250 large conductance mechanosensitive channel protein MscL 0.45 HSERO_RS14740 efflux transmembrane protein low > 78
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS18830 large-conductance mechanosensitive channel 0.56 RR42_RS11400 MFS sugar transporter low > 128
Ralstonia sp. UNC404CL21Col 0.49 ABZR87_RS02390 large conductance mechanosensitive channel protein MscL 0.31 ABZR87_RS00250 MFS transporter low > 80
Ralstonia solanacearum GMI1000 0.47 RS_RS14680 large conductance mechanosensitive channel protein MscL 0.53 RS_RS05745 MFS transporter — —
Ralstonia solanacearum UW163 0.47 UW163_RS06880 large conductance mechanosensitive channel protein MscL 0.55 UW163_RS12400 MFS transporter — —
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS06735 large conductance mechanosensitive channel protein MscL 0.55 RALBFv3_RS14930 MFS transporter low > 76
Variovorax sp. OAS795 0.47 ABID97_RS23050 large conductance mechanosensitive channel protein MscL 0.42 ABID97_RS15820 MFS transporter low > 91
Acidovorax sp. GW101-3H11 0.47 Ac3H11_4748 Large-conductance mechanosensitive channel 0.51 Ac3H11_1989 Putative drug efflux protein — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.45 GFF1296 Large-conductance mechanosensitive channel 0.57 GFF2876 Putative drug efflux protein low > 90
Sphingomonas koreensis DSMZ 15582 0.45 Ga0059261_2131 large conductance mechanosensitive channel protein 0.35 Ga0059261_0886 Arabinose efflux permease low > 68
Dinoroseobacter shibae DFL-12 0.45 Dshi_0241 large conductance mechanosensitive channel protein (RefSeq) 0.20 Dshi_2354 major facilitator superfamily MFS_1 (RefSeq) low > 64
Variovorax sp. SCN45 0.44 GFF5369 Large-conductance mechanosensitive channel 0.55 GFF4517 Uncharacterized MFS-type transporter YtbD low > 127
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS09275 large-conductance mechanosensitive channel 0.45 BPHYT_RS16520 major facilitator superfamily protein — —
Paraburkholderia graminis OAS925 0.43 ABIE53_002092 large conductance mechanosensitive channel 0.46 ABIE53_003475 DHA1 family inner membrane transport protein low > 113
Paraburkholderia bryophila 376MFSha3.1 0.43 H281DRAFT_00877 large conductance mechanosensitive channel 0.45 H281DRAFT_04235 MFS transporter, DHA1 family, arabinose polymer transporter low > 103
Azospirillum sp. SherDot2 0.43 MPMX19_00116 Large-conductance mechanosensitive channel 0.69 MPMX19_01134 Inner membrane transport protein YdhP low > 112
Shewanella sp. ANA-3 0.43 Shewana3_0520 mscL large-conductance mechanosensitive channel (RefSeq) 0.57 Shewana3_3597 major facilitator transporter (RefSeq) low > 73
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS22080 large conductance mechanosensitive channel protein MscL 0.54 QEN71_RS38940 MFS transporter low > 153
Pseudomonas putida KT2440 0.41 PP_4645 Large-conductance mechanosensitive channel 0.35 PP_2535 putative inner membrane transport protein low > 96
Pseudomonas sp. RS175 0.41 PFR28_03795 Large-conductance mechanosensitive channel 0.40 PFR28_04198 Inner membrane transport protein YdhP low > 88
Escherichia coli ECRC102 0.39 NIAGMN_15280 mscL large-conductance mechanosensitive channel protein MscL 0.30 NIAGMN_00665 ydhP Inner membrane transport protein YdhP — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_00413 Large-conductance mechanosensitive channel 0.30 OHPLBJKB_02068 Inner membrane transport protein YdhP low > 73
Escherichia coli ECOR38 0.39 HEPCGN_16340 mscL large-conductance mechanosensitive channel protein MscL 0.30 HEPCGN_05785 ydhP Inner membrane transport protein YdhP low > 85
Escherichia coli BL21 0.39 ECD_03141 mechanosensitive channel protein, high conductance 0.30 ECD_01627 putative MFS transporter, inner membrane protein low > 60
Escherichia coli ECRC101 0.39 MCAODC_08040 mscL large-conductance mechanosensitive channel protein MscL 0.30 MCAODC_18010 ydhP Inner membrane transport protein YdhP — —
Escherichia coli ECRC99 0.39 KEDOAH_10630 mscL large-conductance mechanosensitive channel protein MscL 0.30 KEDOAH_00710 ydhP Inner membrane transport protein YdhP — —
Escherichia coli ECRC98 0.39 JDDGAC_21140 mscL large-conductance mechanosensitive channel protein MscL 0.30 JDDGAC_01990 ydhP Inner membrane transport protein YdhP — —
Pectobacterium carotovorum WPP14 0.39 HER17_RS02205 large-conductance mechanosensitive channel protein MscL 0.37 HER17_RS09415 MFS transporter low > 75
Escherichia coli ECRC101 0.39 OKFHMN_17510 mscL large-conductance mechanosensitive channel protein MscL 0.30 OKFHMN_27400 ydhP Inner membrane transport protein YdhP — —
Escherichia coli BW25113 0.39 b3291 mscL large-conductance mechanosensitive channel (NCBI) 0.30 b1657 ydhP predicted transporter (NCBI) low > 76
Dickeya dianthicola 67-19 0.39 HGI48_RS19235 large-conductance mechanosensitive channel protein MscL 0.18 HGI48_RS09295 sugar transporter low > 71
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_15665 large-conductance mechanosensitive channel 0.40 AO356_13630 arabinose transporter permease low > 104
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_5073 Large-conductance mechanosensitive channel 0.40 Pf6N2E2_4644 Arabinose efflux permease low > 103
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_1441 Large-conductance mechanosensitive channel 0.54 PfGW456L13_1297 Putative drug efflux protein low > 87
Klebsiella michiganensis M5al 0.38 BWI76_RS25690 large-conductance mechanosensitive channel 0.54 BWI76_RS05420 MFS transporter low > 92
Escherichia coli ECOR27 0.38 NOLOHH_09310 mscL large-conductance mechanosensitive channel protein MscL 0.30 NOLOHH_17920 ydhP Inner membrane transport protein YdhP low > 57
Pantoea sp. MT58 0.38 IAI47_02270 large-conductance mechanosensitive channel protein MscL 0.42 IAI47_03850 MFS transporter low > 76
Escherichia coli ECRC62 0.38 BNILDI_02210 mscL large-conductance mechanosensitive channel protein MscL 0.30 BNILDI_16710 ydhP Inner membrane transport protein YdhP — —
Escherichia coli Nissle 1917 0.38 ECOLIN_RS18885 large-conductance mechanosensitive channel protein MscL 0.31 ECOLIN_RS09235 MFS transporter — —
Escherichia fergusonii Becca 0.38 EFB2_00533 Large-conductance mechanosensitive channel 0.30 EFB2_02336 Inner membrane transport protein YdhP low > 86
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_13965 large-conductance mechanosensitive channel 0.54 AO353_06785 MFS sugar transporter low > 101
Enterobacter asburiae PDN3 0.38 EX28DRAFT_0037 large conductance mechanosensitive channel protein 0.56 EX28DRAFT_2686 Arabinose efflux permease low > 76
Dickeya dianthicola ME23 0.38 DZA65_RS20360 large-conductance mechanosensitive channel protein MscL 0.18 DZA65_RS09600 sugar transporter low > 75
Dickeya dadantii 3937 0.38 DDA3937_RS19145 large-conductance mechanosensitive channel protein MscL 0.55 DDA3937_RS03650 MFS transporter low > 74
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_4276 Large-conductance mechanosensitive channel 0.35 Psyr_4052 General substrate transporter:Major facilitator superfamily low > 86
Brevundimonas sp. GW460-12-10-14-LB2 0.38 A4249_RS10890 large-conductance mechanosensitive channel protein MscL 0.37 A4249_RS02135 MFS transporter low > 48
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_4276 Large-conductance mechanosensitive channel 0.35 Psyr_4052 General substrate transporter:Major facilitator superfamily low > 86
Pseudomonas fluorescens FW300-N1B4 0.38 Pf1N1B4_2765 Large-conductance mechanosensitive channel 0.54 Pf1N1B4_2633 Putative drug efflux protein low > 87
Serratia liquefaciens MT49 0.37 IAI46_23285 large-conductance mechanosensitive channel protein MscL 0.56 IAI46_04120 MFS transporter low > 86
Rahnella sp. WP5 0.37 EX31_RS15995 large-conductance mechanosensitive channel protein MscL 0.58 EX31_RS21215 MFS transporter low > 89
Xanthomonas campestris pv. campestris strain 8004 0.37 Xcc-8004.1277.1 Large-conductance mechanosensitive channel 0.43 Xcc-8004.1806.1 MFS transporter — —
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS26245 large-conductance mechanosensitive channel protein MscL 0.36 PFLU_RS06850 MFS transporter low > 109
Pseudomonas fluorescens SBW25 0.37 PFLU_RS26245 large-conductance mechanosensitive channel protein MscL 0.36 PFLU_RS06850 MFS transporter low > 109
Pseudomonas simiae WCS417 0.37 PS417_24320 large-conductance mechanosensitive channel 0.38 PS417_14585 MFS transporter low > 88
Pseudomonas sp. S08-1 0.36 OH686_16155 large conductance mechanosensitive channel protein 0.35 OH686_06195 Uncharacterized MFS-type transporter 0.48 47
Lysobacter sp. OAE881 0.35 ABIE51_RS16585 large-conductance mechanosensitive channel protein MscL 0.41 ABIE51_RS06085 MFS transporter 0.52 32
Dyella japonica UNC79MFTsu3.2 0.35 ABZR86_RS11735 large-conductance mechanosensitive channel protein MscL 0.38 ABZR86_RS18115 MFS transporter low > 74
Enterobacter sp. TBS_079 0.33 MPMX20_04198 Large-conductance mechanosensitive channel 0.58 MPMX20_00893 Inner membrane transport protein YdhP low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF2388 Large-conductance mechanosensitive channel 0.55 GFF4040 Putative drug efflux protein low > 78
Mycobacterium tuberculosis H37Rv 0.22 Rv0985c Possible large-conductance ion mechanosensitive channel MscL 0.13 Rv0191 Probable conserved integral membrane protein low > 58

Not shown: 29 genomes with orthologs for Atu0528 only; 5 genomes with orthologs for Atu4292 only