Conservation of cofitness between Atu3469 and Atu2790 in Agrobacterium fabrum C58

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu3469 phosphoglyceromutase 1.0 Atu2790 3-isopropylmalate dehydratase, small subunit 0.67 3
Phaeobacter inhibens DSM 17395 0.68 PGA1_c02770 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GpmI 0.71 PGA1_c29790 3-isopropylmalate dehydratase small subunit
Dinoroseobacter shibae DFL-12 0.67 Dshi_0089 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (RefSeq) 0.77 Dshi_0083 3-isopropylmalate dehydratase, small subunit (RefSeq) 0.46 25
Azospirillum brasilense Sp245 0.54 AZOBR_RS04055 phosphoglyceromutase 0.74 AZOBR_RS14135 isopropylmalate isomerase
Azospirillum sp. SherDot2 0.54 MPMX19_01939 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.75 MPMX19_00606 3-isopropylmalate dehydratase small subunit 1 0.65 89
Rhodopseudomonas palustris CGA009 0.53 TX73_001765 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.77 TX73_001215 3-isopropylmalate dehydratase small subunit
Rhodospirillum rubrum S1H 0.52 Rru_A1234 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (NCBI) 0.74 Rru_A1190 3-isopropylmalate dehydratase small subunit region (NCBI)
Bosea sp. OAE506 0.51 ABIE41_RS09590 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.78 ABIE41_RS11640 3-isopropylmalate dehydratase small subunit
Magnetospirillum magneticum AMB-1 0.48 AMB_RS01545 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.74 AMB_RS20565 3-isopropylmalate dehydratase small subunit
Kangiella aquimarina DSM 16071 0.47 B158DRAFT_0706 phosphoglycerate mutase (EC 5.4.2.1) 0.54 B158DRAFT_1320 3-isopropylmalate dehydratase, small subunit
Enterobacter asburiae PDN3 0.46 EX28DRAFT_3863 phosphoglycerate mutase (EC 5.4.2.1) 0.50 EX28DRAFT_3667 3-isopropylmalate dehydratase, small subunit low > 76
Escherichia coli ECOR38 0.46 HEPCGN_14575 gpmM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.50 HEPCGN_08710 leuD 3-isopropylmalate dehydratase small subunit low > 85
Escherichia fergusonii Becca 0.46 EFB2_00198 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.50 EFB2_03974 3-isopropylmalate dehydratase small subunit low > 86
Escherichia coli BW25113 0.46 b3612 gpmI phosphoglyceromutase (NCBI) 0.50 b0071 leuD isopropylmalate isomerase small subunit (NCBI) low > 76
Escherichia coli Nissle 1917 0.46 ECOLIN_RS20615 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.50 ECOLIN_RS00385 3-isopropylmalate dehydratase small subunit low > 52
Escherichia coli ECOR27 0.46 NOLOHH_07615 gpmM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.50 NOLOHH_03075 leuD 3-isopropylmalate dehydratase small subunit low > 57
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF398 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) 0.50 GFF167 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) low > 78
Escherichia coli ECRC62 0.46 BNILDI_03900 gpmM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.50 BNILDI_08535 leuD 3-isopropylmalate dehydratase small subunit
Escherichia coli BL21 0.46 ECD_03470 phosphoglycero mutase III, cofactor-independent 0.50 ECD_00073 3-isopropylmalate dehydratase small subunit low > 60
Escherichia coli ECRC101 0.46 OKFHMN_15735 gpmM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.49 OKFHMN_10730 leuD 3-isopropylmalate dehydratase small subunit
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_00087 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.50 OHPLBJKB_03586 3-isopropylmalate dehydratase small subunit low > 73
Escherichia coli ECRC102 0.46 NIAGMN_13495 gpmM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.49 NIAGMN_08580 leuD 3-isopropylmalate dehydratase small subunit
Escherichia coli ECRC101 0.46 MCAODC_06245 gpmM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.49 MCAODC_01245 leuD 3-isopropylmalate dehydratase small subunit
Escherichia coli ECRC99 0.46 KEDOAH_12415 gpmM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.49 KEDOAH_17425 leuD 3-isopropylmalate dehydratase small subunit
Escherichia coli ECRC98 0.46 JDDGAC_19360 gpmM 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.49 JDDGAC_14325 leuD 3-isopropylmalate dehydratase small subunit
Enterobacter sp. TBS_079 0.46 MPMX20_00121 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.49 MPMX20_00766 3-isopropylmalate dehydratase small subunit 1 low > 85
Klebsiella michiganensis M5al 0.46 BWI76_RS27230 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.49 BWI76_RS04665 3-isopropylmalate dehydratase small subunit low > 92
Shewanella amazonensis SB2B 0.45 Sama_0060 phosphoglyceromutase (RefSeq) 0.47 Sama_0338 leuD isopropylmalate isomerase small subunit (RefSeq)
Rahnella sp. WP5 0.45 EX31_RS14360 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.50 EX31_RS03695 3-isopropylmalate dehydratase small subunit low > 89
Shewanella loihica PV-4 0.45 Shew_3806 phosphoglyceromutase (RefSeq) 0.48 Shew_3469 isopropylmalate isomerase small subunit (RefSeq)
Shewanella sp. ANA-3 0.44 Shewana3_0051 phosphoglyceromutase (RefSeq) 0.49 Shewana3_3758 leuD isopropylmalate isomerase small subunit (RefSeq)
Shewanella oneidensis MR-1 0.44 SO0049 gpmA phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (NCBI ptt file) 0.49 SO4233 leuD 3-isopropylmalate dehydratase, small subunit (NCBI ptt file)
Pseudomonas fluorescens GW456-L13 0.44 PfGW456L13_353 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) 0.55 PfGW456L13_3947 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
Marinobacter adhaerens HP15 0.44 HP15_3005 phosphoglyceromutase 0.58 HP15_1833 isopropylmalate isomerase small subunit
Pseudomonas simiae WCS417 0.44 PS417_01605 phosphoglycerate mutase 0.54 PS417_18595 3-isopropylmalate dehydratase 0.36 51
Lysobacter sp. OAE881 0.44 ABIE51_RS19265 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.42 ABIE51_RS17580 3-isopropylmalate dehydratase small subunit low > 62
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS01655 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.53 PFLU_RS20575 3-isopropylmalate dehydratase small subunit
Pseudomonas fluorescens SBW25 0.44 PFLU_RS01655 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.53 PFLU_RS20575 3-isopropylmalate dehydratase small subunit
Pseudomonas putida KT2440 0.44 PP_5056 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.56 PP_1986 3-isopropylmalate dehydratase small subunit
Serratia liquefaciens MT49 0.44 IAI46_24710 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.51 IAI46_03340 3-isopropylmalate dehydratase small subunit low > 86
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_12115 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.55 AO353_20625 3-isopropylmalate dehydratase 0.42 56
Pseudomonas syringae pv. syringae B728a 0.43 Psyr_4885 phosphoglycerate mutase 0.56 Psyr_1984 3-isopropylmalate dehydratase, small subunit
Pseudomonas syringae pv. syringae B728a ΔmexB 0.43 Psyr_4885 phosphoglycerate mutase 0.56 Psyr_1984 3-isopropylmalate dehydratase, small subunit
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_09770 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.55 AO356_21405 3-isopropylmalate dehydratase
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_1617 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) 0.56 Pf1N1B4_14 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
Pseudomonas sp. S08-1 0.43 OH686_14655 phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 0.55 OH686_04475 3-isopropylmalate dehydratase small subunit
Pseudomonas sp. RS175 0.43 PFR28_04938 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.55 PFR28_02823 3-isopropylmalate dehydratase small subunit 1
Vibrio cholerae E7946 ATCC 55056 0.43 CSW01_01740 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.50 CSW01_12610 3-isopropylmalate dehydratase small subunit
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_3832 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) 0.55 Pf6N2E2_64 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
Pseudomonas stutzeri RCH2 0.42 Psest_0162 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.56 Psest_2590 3-isopropylmalate dehydratase, small subunit
Echinicola vietnamensis KMM 6221, DSM 17526 0.42 Echvi_0844 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.42 Echvi_2060 3-isopropylmalate dehydratase, small subunit
Acinetobacter radioresistens SK82 0.42 MPMX26_00160 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.57 MPMX26_00346 3-isopropylmalate dehydratase small subunit 1
Pontibacter actiniarum KMM 6156, DSM 19842 0.39 CA264_16950 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.45 CA264_09440 3-isopropylmalate dehydratase small subunit
Bacteroides stercoris CC31F 0.39 HMPREF1181_RS02685 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.40 HMPREF1181_RS14140 3-isopropylmalate dehydratase small subunit
Bacteroides thetaiotaomicron VPI-5482 0.39 BT3419 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (NCBI ptt file) 0.38 BT1859 3-isopropylmalate dehydratase small subunit (NCBI ptt file)
Pedobacter sp. GW460-11-11-14-LB5 0.39 CA265_RS14540 phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 0.44 CA265_RS15840 3-isopropylmalate dehydratase small subunit
Parabacteroides merdae CL09T00C40 0.39 HMPREF1078_RS04580 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.39 HMPREF1078_RS16655 3-isopropylmalate dehydratase small subunit
Phocaeicola dorei CL03T12C01 0.38 ABI39_RS04505 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.40 ABI39_RS10205 3-isopropylmalate dehydratase small subunit 0.57 56
Phocaeicola vulgatus CL09T03C04 0.38 HMPREF1058_RS12285 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.40 HMPREF1058_RS14555 3-isopropylmalate dehydratase small subunit
Bacteroides ovatus ATCC 8483 0.38 BACOVA_01888 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.39 BACOVA_04602 3-isopropylmalate dehydratase, small subunit
Mucilaginibacter yixingensis YX-36 DSM 26809 0.38 ABZR88_RS15685 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.42 ABZR88_RS11600 3-isopropylmalate dehydratase small subunit
Dechlorosoma suillum PS 0.28 Dsui_2175 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 0.56 Dsui_3199 3-isopropylmalate dehydratase, small subunit

Not shown: 3 genomes with orthologs for Atu3469 only; 36 genomes with orthologs for Atu2790 only