Conservation of cofitness between Atu2155 and Atu2650 in Agrobacterium fabrum C58

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu2155 methionine synthase 1.0 Atu2650 glycerol-3-phosphate dehydrogenase 0.82 18
Rhizobium sp. OAE497 0.89 ABIE40_RS12135 methionine synthase 0.72 ABIE40_RS18055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase low > 107
Sinorhizobium meliloti 1021 0.79 SMc03112 B12-dependent methionine synthase 0.64 SMc03229 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 0.79 71
Rhodopseudomonas palustris CGA009 0.71 TX73_019180 methionine synthase 0.34 TX73_001320 NAD(P)-dependent glycerol-3-phosphate dehydrogenase 0.29 34
Marinobacter adhaerens HP15 0.62 HP15_1792 B12-dependent methionine synthase 0.31 HP15_1762 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase — —
Pseudomonas stutzeri RCH2 0.61 Psest_2102 5-methyltetrahydrofolate--homocysteine methyltransferase 0.30 Psest_2471 Glycerol-3-phosphate dehydrogenase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.61 ABZR88_RS20930 methionine synthase 0.18 ABZR88_RS01515 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase — —
Kangiella aquimarina DSM 16071 0.60 B158DRAFT_2466 methionine synthase (B12-dependent) (EC 2.1.1.13) 0.39 B158DRAFT_0712 Glycerol-3-phosphate dehydrogenase — —
Pedobacter sp. GW460-11-11-14-LB5 0.60 CA265_RS23440 methionine synthase 0.17 CA265_RS16375 glycerol-3-phosphate dehydrogenase — —
Pseudomonas sp. S08-1 0.60 OH686_03335 methionine synthase 0.26 OH686_00475 Glycerol-3-phosphate dehydrogenase [NAD(P)+] low > 80
Pseudomonas putida KT2440 0.60 PP_2375 cobalamin-dependent methionine synthase 0.28 PP_4169 Glycerol-3-phosphate dehydrogenase [NAD(P)+] — —
Shewanella loihica PV-4 0.60 Shew_0710 metH B12-dependent methionine synthase (RefSeq) 0.36 Shew_3803 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) — —
Serratia liquefaciens MT49 0.60 IAI46_23155 methionine synthase 0.38 IAI46_24690 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase low > 86
Shewanella amazonensis SB2B 0.60 Sama_0758 metH B12-dependent methionine synthase (RefSeq) 0.36 Sama_0063 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) — —
Pseudomonas sp. RS175 0.60 PFR28_01369 Methionine synthase 0.29 PFR28_03076 Glycerol-3-phosphate dehydrogenase [NAD(P)+] — —
Dickeya dianthicola ME23 0.60 DZA65_RS20250 methionine synthase 0.37 DZA65_RS00850 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase — —
Dickeya dadantii 3937 0.60 DDA3937_RS19040 methionine synthase 0.37 DDA3937_RS20405 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase — —
Rahnella sp. WP5 0.60 EX31_RS11760 methionine synthase 0.38 EX31_RS14340 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase low > 89
Pontibacter actiniarum KMM 6156, DSM 19842 0.59 CA264_16785 methionine synthase 0.18 CA264_05630 glycerol-3-phosphate dehydrogenase low > 74
Shewanella sp. ANA-3 0.59 Shewana3_3282 metH B12-dependent methionine synthase (RefSeq) 0.35 Shewana3_0054 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (RefSeq) — —
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_2068 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) 0.29 Pf6N2E2_5875 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) — —
Pseudomonas fluorescens FW300-N2C3 0.59 AO356_00545 methionine synthase 0.29 AO356_19795 glycerol-3-phosphate dehydrogenase 0.27 86
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_5661 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) 0.25 Pf1N1B4_3518 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) low > 87
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_21615 methionine synthase 0.29 AO353_01735 glycerol-3-phosphate dehydrogenase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.59 Psyr_2464 methionine synthase (B12-dependent) 0.28 Psyr_2022 Glycerol-3-phosphate dehydrogenase (NAD(P)+) low > 86
Pseudomonas fluorescens SBW25 0.59 PFLU_RS13000 methionine synthase 0.28 PFLU_RS09055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase low > 109
Pseudomonas fluorescens GW456-L13 0.59 PfGW456L13_2847 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) 0.28 PfGW456L13_2046 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) low > 87
Dickeya dianthicola 67-19 0.59 HGI48_RS19130 methionine synthase 0.37 HGI48_RS00795 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase low > 71
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS13000 methionine synthase 0.28 PFLU_RS09055 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase low > 109
Pseudomonas syringae pv. syringae B728a 0.59 Psyr_2464 methionine synthase (B12-dependent) 0.28 Psyr_2022 Glycerol-3-phosphate dehydrogenase (NAD(P)+) — —
Enterobacter asburiae PDN3 0.59 EX28DRAFT_4326 methionine synthase (B12-dependent) (EC 2.1.1.13) 0.36 EX28DRAFT_3859 Glycerol-3-phosphate dehydrogenase — —
Shewanella oneidensis MR-1 0.59 SO1030 metH 5-methyltetrahydrofolate--homocysteine methyltransferase (NCBI ptt file) 0.35 SO0053 gpsA glycerol-3-phosphate dehydrogenase (NAD(P)+) (NCBI ptt file) — —
Pseudomonas simiae WCS417 0.59 PS417_12310 methionine synthase 0.28 PS417_09000 glycerol-3-phosphate dehydrogenase — —
Klebsiella michiganensis M5al 0.59 BWI76_RS01685 methionine synthase 0.36 BWI76_RS27210 glycerol-3-phosphate dehydrogenase — —
Pectobacterium carotovorum WPP14 0.59 HER17_RS02310 methionine synthase 0.37 HER17_RS20735 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase low > 75
Acinetobacter radioresistens SK82 0.59 MPMX26_02351 Methionine synthase 0.26 MPMX26_01116 Glycerol-3-phosphate dehydrogenase [NAD(P)+] — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF1358 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) 0.36 GFF402 Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94) — —
Enterobacter sp. TBS_079 0.58 MPMX20_00235 Methionine synthase 0.36 MPMX20_00125 Glycerol-3-phosphate dehydrogenase [NAD(P)+] — —
Escherichia coli BW25113 0.58 b4019 metH B12-dependent methionine synthase (NCBI) 0.36 b3608 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (NCBI) — —
Pantoea sp. MT58 0.58 IAI47_17990 methionine synthase 0.38 IAI47_00740 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase — —
Escherichia coli ECRC62 0.58 BNILDI_06140 metH methionine synthase 0.36 BNILDI_03880 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase — —
Escherichia coli ECRC101 0.58 OKFHMN_13240 metH methionine synthase 0.36 OKFHMN_15755 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase — —
Escherichia coli ECRC101 0.58 MCAODC_03740 metH methionine synthase 0.36 MCAODC_06265 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase — —
Escherichia coli ECRC102 0.58 NIAGMN_10990 metH methionine synthase 0.36 NIAGMN_13515 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase — —
Escherichia coli BL21 0.58 ECD_03891 homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent 0.36 ECD_03466 glycerol-3-phosphate dehydrogenase (NAD+) — —
Escherichia coli ECRC99 0.58 KEDOAH_14920 metH methionine synthase 0.36 KEDOAH_12395 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase — —
Escherichia coli ECRC98 0.58 JDDGAC_16865 metH methionine synthase 0.36 JDDGAC_19380 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.58 OHPLBJKB_04030 Methionine synthase 0.36 OHPLBJKB_00091 Glycerol-3-phosphate dehydrogenase [NAD(P)+] — —
Escherichia coli ECOR27 0.58 NOLOHH_05380 metH methionine synthase 0.36 NOLOHH_07635 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase — —
Escherichia coli ECOR38 0.58 HEPCGN_11885 metH methionine synthase 0.36 HEPCGN_14595 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase — —
Escherichia coli Nissle 1917 0.58 ECOLIN_RS23160 methionine synthase 0.36 ECOLIN_RS20595 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase — —
Escherichia fergusonii Becca 0.58 EFB2_04592 Methionine synthase 0.36 EFB2_00202 Glycerol-3-phosphate dehydrogenase [NAD(P)+] — —
Herbaspirillum seropedicae SmR1 0.58 HSERO_RS21740 methionine synthase 0.32 HSERO_RS00795 glycerol-3-phosphate dehydrogenase low > 78
Vibrio cholerae E7946 ATCC 55056 0.58 CSW01_02060 methionine synthase 0.36 CSW01_13405 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) — —
Dechlorosoma suillum PS 0.57 Dsui_0779 5-methyltetrahydrofolate--homocysteine methyltransferase 0.27 Dsui_1277 glycerol-3-phosphate dehydrogenase — —
Castellaniella sp019104865 MT123 0.55 ABCV34_RS14560 methionine synthase 0.31 ABCV34_RS14250 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase low > 48
Parabacteroides merdae CL09T00C40 0.48 HMPREF1078_RS14955 methionine synthase 0.17 HMPREF1078_RS10070 glycerol-3-phosphate dehydrogenase — —
Fusobacterium nucleatum SB010 0.28 HUW76_02290 homocysteine S-methyltransferase family protein 0.34 HUW76_05650 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase — —
Synechococcus elongatus PCC 7942 0.23 Synpcc7942_1372 metH methionine synthase (B12-dependent) 0.25 Synpcc7942_2522 Glycerol-3-phosphate dehydrogenase (NAD(P)+) — —
Mycobacterium tuberculosis H37Rv 0.22 Rv2124c 5-methyltetrahydrofolate--homocystein methyltransferase MetH (methionine synthase, vitamin-B12 dependent isozyme) (ms) 0.28 Rv2982c Probable glycerol-3-phosphate dehydrogenase [NAD(P)+] GpdA2 (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) low > 58
Azospirillum sp. SherDot2 0.21 MPMX19_00637 Methionine synthase 0.37 MPMX19_02123 Glycerol-3-phosphate dehydrogenase [NAD(P)+] — —
Rhodospirillum rubrum S1H 0.20 Rru_A1531 5-methyltetrahydrofolate--homocysteine methyltransferase (NCBI) 0.38 Rru_A3571 Glycerol-3-phosphate dehydrogenase (NAD(P)+) (NCBI) — —

Not shown: 1 genomes with orthologs for Atu2155 only; 38 genomes with orthologs for Atu2650 only