| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Agrobacterium fabrum C58 | 1.0 | Atu1446 | | two component response regulator | 1.0 | Atu2548 | | phosphoribosylaminoimidazole-succinocarboxamide synthase | 0.48 | 8 |
| Rhizobium sp. OAE497 | 0.95 | ABIE40_RS09090 | | nitrogen regulation protein NR(I) | 0.84 | ABIE40_RS15345 | | phosphoribosylaminoimidazolesuccinocarboxamide synthase | 0.81 | 61 |
| Rhodopseudomonas palustris CGA009 | 0.75 | TX73_013420 | | nitrogen regulation protein NR(I) | 0.27 | TX73_002890 | | phosphoribosylaminoimidazolesuccinocarboxamide synthase | low | > 86 |
| Bosea sp. OAE506 | 0.73 | ABIE41_RS16785 | | nitrogen regulation protein NR(I) | 0.75 | ABIE41_RS20895 | | phosphoribosylaminoimidazolesuccinocarboxamide synthase | low | > 77 |
| Magnetospirillum magneticum AMB-1 | 0.70 | AMB_RS11950 | | nitrogen regulation protein NR(I) | 0.64 | AMB_RS10255 | | phosphoribosylaminoimidazolesuccinocarboxamide synthase | — | — |
| Azospirillum sp. SherDot2 | 0.69 | MPMX19_01112 | | DNA-binding transcriptional regulator NtrC | 0.67 | MPMX19_05727 | | Phosphoribosylaminoimidazole-succinocarboxamide synthase | — | — |
| Azospirillum brasilense Sp245 | 0.69 | AZOBR_RS14430 | | chemotaxis protein CheY | 0.70 | AZOBR_RS18325 | | phosphoribosylaminoimidazole-succinocarboxamide synthase | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.56 | CCNA_01815 | | nitrogen assimilation regulatory protein NtrC | 0.69 | CCNA_03351 | | phosphoribosylamidoimidazole-succinocarboxamide synthase | — | — |
| Caulobacter crescentus NA1000 | 0.56 | CCNA_01815 | | nitrogen assimilation regulatory protein NtrC | 0.69 | CCNA_03351 | | phosphoribosylamidoimidazole-succinocarboxamide synthase | low | > 66 |
| Variovorax sp. SCN45 | 0.41 | GFF3066 | | Nitrogen regulation protein NR(I), GlnG (=NtrC) | 0.32 | GFF5509 | | Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) | — | — |
| Variovorax sp. OAS795 | 0.41 | ABID97_RS09945 | | nitrogen regulation protein NR(I) | 0.31 | ABID97_RS01730 | | phosphoribosylaminoimidazolesuccinocarboxamide synthase | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.40 | QEN71_RS05675 | | nitrogen regulation protein NR(I) | 0.32 | QEN71_RS02440 | | phosphoribosylaminoimidazolesuccinocarboxamide synthase | low | > 153 |
| Shewanella sp. ANA-3 | 0.40 | Shewana3_0258 | | nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) | 0.17 | Shewana3_3622 | | phosphoribosylaminoimidazole-succinocarboxamide synthase (RefSeq) | low | > 73 |
| Ralstonia solanacearum PSI07 | 0.40 | RPSI07_RS17815 | | nitrogen regulation protein NR(I) | 0.29 | RPSI07_RS21140 | | phosphoribosylaminoimidazolesuccinocarboxamide synthase | — | — |
| Shewanella loihica PV-4 | 0.40 | Shew_3561 | | nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) | 0.17 | Shew_2211 | | phosphoribosylaminoimidazole-succinocarboxamidesynthase (RefSeq) | 0.70 | 27 |
| Cupriavidus basilensis FW507-4G11 | 0.40 | RR42_RS12980 | | chemotaxis protein CheY | 0.31 | RR42_RS03220 | | phosphoribosylaminoimidazole-succinocarboxamide synthase | — | — |
| Shewanella oneidensis MR-1 | 0.40 | SO4472 | ntrC | nitrogen regulation protein NR(I) (NCBI ptt file) | 0.17 | SO4066 | | phosphoribosylaminoimidazole-succinocarboxamide synthase, putative (NCBI ptt file) | low | > 76 |
| Paraburkholderia graminis OAS925 | 0.40 | ABIE53_002804 | | two-component system nitrogen regulation response regulator GlnG | 0.32 | ABIE53_003425 | | phosphoribosylaminoimidazole-succinocarboxamide synthase | — | — |
| Shewanella amazonensis SB2B | 0.40 | Sama_3427 | | response regulator receiver protein (RefSeq) | 0.18 | Sama_0491 | | phosphoribosylaminoimidazole-succinocarboxamide synthase (RefSeq) | 0.55 | 47 |
| Burkholderia phytofirmans PsJN | 0.40 | BPHYT_RS12935 | | chemotaxis protein CheY | 0.32 | BPHYT_RS16255 | | phosphoribosylaminoimidazole-succinocarboxamide synthase | low | > 109 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.40 | H281DRAFT_00454 | | nitrogen metabolism transcriptional regulator, NtrC, Fis family | 0.32 | H281DRAFT_04187 | | phosphoribosylaminoimidazole-succinocarboxamide synthase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.40 | ABZR87_RS11070 | | nitrogen regulation protein NR(I) | 0.29 | ABZR87_RS08080 | | phosphoribosylaminoimidazolesuccinocarboxamide synthase | — | — |
| Pseudomonas sp. S08-1 | 0.39 | OH686_10640 | | nitrogen regulation protein NR(I) | 0.29 | OH686_19225 | | phosphoribosylaminoimidazolesuccinocarboxamide synthase | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.39 | GFF5269 | | Nitrogen regulation protein NR(I) | 0.27 | GFF2773 | | Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.39 | RALBFv3_RS15540 | | nitrogen regulation protein NR(I) | 0.30 | RALBFv3_RS12190 | | phosphoribosylaminoimidazolesuccinocarboxamide synthase | — | — |
| Pseudomonas stutzeri RCH2 | 0.39 | Psest_3932 | | nitrogen regulation protein NR(I) | 0.30 | Psest_1517 | | phosphoribosylaminoimidazole-succinocarboxamide synthase | — | — |
| Ralstonia solanacearum UW163 | 0.39 | UW163_RS13000 | | nitrogen regulation protein NR(I) | 0.30 | UW163_RS01420 | | phosphoribosylaminoimidazolesuccinocarboxamide synthase | — | — |
| Herbaspirillum seropedicae SmR1 | 0.39 | HSERO_RS15680 | | chemotaxis protein CheY | 0.28 | HSERO_RS03360 | | phosphoribosylaminoimidazole-succinocarboxamide synthase | — | — |
| Ralstonia solanacearum GMI1000 | 0.38 | RS_RS06320 | | nitrogen regulation protein NR(I) | 0.29 | RS_RS02875 | | phosphoribosylaminoimidazolesuccinocarboxamide synthase | — | — |
| Dechlorosoma suillum PS | 0.38 | Dsui_1051 | | nitrogen regulation protein NR(I) | 0.27 | Dsui_0048 | | phosphoribosylaminoimidazole-succinocarboxamide synthase | — | — |
| Rhodanobacter denitrificans MT42 | 0.37 | LRK55_RS07730 | | nitrogen regulation protein NR(I) | 0.30 | LRK55_RS11105 | | phosphoribosylaminoimidazolesuccinocarboxamide synthase | low | > 63 |
| Lysobacter sp. OAE881 | 0.37 | ABIE51_RS01360 | | nitrogen regulation protein NR(I) | 0.26 | ABIE51_RS04125 | | phosphoribosylaminoimidazolesuccinocarboxamide synthase | low | > 62 |
| Rhodanobacter denitrificans FW104-10B01 | 0.36 | LRK54_RS07980 | | nitrogen regulation protein NR(I) | 0.30 | LRK54_RS11375 | | phosphoribosylaminoimidazolesuccinocarboxamide synthase | 0.58 | 10 |
| Castellaniella sp019104865 MT123 | 0.36 | ABCV34_RS03540 | | nitrogen regulation protein NR(I) | 0.28 | ABCV34_RS00555 | | phosphoribosylaminoimidazolesuccinocarboxamide synthase | — | — |
| Xanthomonas campestris pv. campestris strain 8004 | 0.36 | Xcc-8004.252.1 | | Nitrogen regulation protein NtrC | 0.28 | Xcc-8004.601.1 | | Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) | low | > 74 |
| Rhodanobacter sp. FW510-T8 | 0.36 | OKGIIK_14465 | ntrC | nitrogen regulation protein NR(I) | 0.30 | OKGIIK_12450 | purC | phosphoribosylaminoimidazolesuccinocarboxamide synthase | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.35 | ABZR86_RS15515 | | nitrogen regulation protein NR(I) | 0.29 | ABZR86_RS12215 | | phosphoribosylaminoimidazolesuccinocarboxamide synthase | low | > 74 |
| Desulfovibrio vulgaris Miyazaki F | 0.35 | DvMF_1993 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | 0.26 | DvMF_2815 | | phosphoribosylaminoimidazole-succinocarboxamide synthase (RefSeq) | low | > 51 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.34 | DVU0110 | ntrC | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | 0.27 | DVU0795 | purC | phosphoribosylaminoimidazole-succinocarboxamide synthase (TIGR) | — | — |
| Phocaeicola vulgatus CL09T03C04 | 0.31 | HMPREF1058_RS04160 | | sigma-54-dependent Fis family transcriptional regulator | 0.41 | HMPREF1058_RS16760 | | phosphoribosylaminoimidazolesuccinocarboxamide synthase | low | > 67 |
| Phocaeicola dorei CL03T12C01 | 0.31 | ABI39_RS17060 | | sigma-54-dependent Fis family transcriptional regulator | 0.42 | ABI39_RS12675 | | phosphoribosylaminoimidazolesuccinocarboxamide synthase | low | > 72 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.31 | BT1529 | | two-component system response regulator (NCBI ptt file) | 0.42 | BT4217 | | phosphoribosylamidoimidazole-succinocarboxamide synthase (NCBI ptt file) | — | — |
| Bacteroides stercoris CC31F | 0.30 | HMPREF1181_RS04840 | | sigma-54-dependent Fis family transcriptional regulator | 0.41 | HMPREF1181_RS06310 | | phosphoribosylaminoimidazolesuccinocarboxamide synthase | low | > 56 |
| Bacteroides ovatus ATCC 8483 | 0.30 | BACOVA_04264 | | Sigma-54 interaction domain protein | 0.42 | BACOVA_05068 | | phosphoribosylaminoimidazolesuccinocarboxamide synthase | — | — |
| Parabacteroides merdae CL09T00C40 | 0.29 | HMPREF1078_RS14380 | | sigma-54 dependent transcriptional regulator | 0.40 | HMPREF1078_RS14210 | | phosphoribosylaminoimidazolesuccinocarboxamide synthase | low | > 61 |
Not shown: 47 genomes with orthologs for Atu1446 only; 7 genomes with orthologs for Atu2548 only