Conservation of cofitness between Atu4096 and Atu2015 in Agrobacterium fabrum C58

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu4096 nicotinate-nucleotide pyrophosphorylase 1.0 Atu2015 aminotransferase 0.83 6
Rhizobium sp. OAE497 0.82 ABIE40_RS23265 carboxylating nicotinate-nucleotide diphosphorylase 0.80 ABIE40_RS11345 PLP-dependent aminotransferase family protein low > 107
Azospirillum sp. SherDot2 0.56 MPMX19_05672 putative nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.49 MPMX19_01777 2-aminoadipate transaminase — —
Caulobacter crescentus NA1000 0.53 CCNA_03009 nicotinate-nucleotide pyrophosphorylase 0.53 CCNA_02244 aminotransferase class I family protein — —
Caulobacter crescentus NA1000 Δfur 0.53 CCNA_03009 nicotinate-nucleotide pyrophosphorylase 0.53 CCNA_02244 aminotransferase class I family protein — —
Rhodospirillum rubrum S1H 0.53 Rru_A1432 Nicotinate-nucleotide pyrophosphorylase (NCBI) 0.53 Rru_A3004 Aminotransferase, class I and II (NCBI) low > 58
Sinorhizobium meliloti 1021 0.49 SMc02598 nicotinate-nucleotide pyrophosphorylase carboxylating protein 0.78 SMc04323 aminotransferase low > 103
Bosea sp. OAE506 0.42 ABIE41_RS02500 carboxylating nicotinate-nucleotide diphosphorylase 0.23 ABIE41_RS13895 PLP-dependent aminotransferase family protein low > 77
Cupriavidus basilensis FW507-4G11 0.41 RR42_RS21245 nicotinate-nucleotide pyrophosphorylase 0.34 RR42_RS14595 2-aminoadipate aminotransferase low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF1217 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.30 GFF1752 Valine--pyruvate aminotransferase (EC 2.6.1.66) low > 90
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_0815 nicotinate-nucleotide pyrophosphorylase (carboxylating) 0.29 Psyr_1841 Aminotransferase, class I and II low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_0815 nicotinate-nucleotide pyrophosphorylase (carboxylating) 0.29 Psyr_1841 Aminotransferase, class I and II low > 86
Bacteroides ovatus ATCC 8483 0.38 BACOVA_04303 nicotinate-nucleotide diphosphorylase (carboxylating) 0.37 BACOVA_03037 aminotransferase, class I/II low > 94
Pseudomonas fluorescens FW300-N1B4 0.38 Pf1N1B4_1153 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.27 Pf1N1B4_3771 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) low > 87
Pseudomonas simiae WCS417 0.38 PS417_03925 nicotinate-nucleotide pyrophosphorylase 0.29 PS417_19385 GntR family transcriptional regulator low > 88
Pseudomonas sp. RS175 0.38 PFR28_00098 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.26 PFR28_03135 2-aminoadipate transaminase low > 88
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS00350 carboxylating nicotinate-nucleotide diphosphorylase 0.37 ABZR87_RS09815 PLP-dependent aminotransferase family protein low > 80
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS03970 carboxylating nicotinate-nucleotide diphosphorylase 0.29 PFLU_RS21355 PLP-dependent aminotransferase family protein low > 109
Pseudomonas fluorescens SBW25 0.38 PFLU_RS03970 carboxylating nicotinate-nucleotide diphosphorylase 0.29 PFLU_RS21355 PLP-dependent aminotransferase family protein low > 109
Pseudomonas stutzeri RCH2 0.37 Psest_0718 nicotinate-nucleotide pyrophosphorylase 0.28 Psest_1990 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs low > 67
Dickeya dadantii 3937 0.37 DDA3937_RS17955 carboxylating nicotinate-nucleotide diphosphorylase 0.26 DDA3937_RS00685 PLP-dependent aminotransferase family protein low > 74
Ralstonia solanacearum UW163 0.36 UW163_RS08940 nicotinate-nucleotide diphosphorylase (carboxylating) 0.37 UW163_RS15715 PLP-dependent aminotransferase family protein — —
Ralstonia solanacearum IBSBF1503 0.36 RALBFv3_RS04730 nicotinate-nucleotide diphosphorylase (carboxylating) 0.37 RALBFv3_RS14095 PLP-dependent aminotransferase family protein low > 76
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_05520 nicotinate-nucleotide pyrophosphorylase 0.27 AO353_02295 GntR family transcriptional regulator low > 101
Acidovorax sp. GW101-3H11 0.36 Ac3H11_3838 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.30 Ac3H11_1358 L-leucine transaminase; L-isoleucine transaminase (EC 2.6.1.42) (from data) low > 79
Dickeya dianthicola 67-19 0.36 HGI48_RS17890 carboxylating nicotinate-nucleotide diphosphorylase 0.26 HGI48_RS20705 PLP-dependent aminotransferase family protein low > 71
Ralstonia solanacearum PSI07 0.36 RPSI07_RS12655 nicotinate-nucleotide diphosphorylase (carboxylating) 0.37 RPSI07_RS19365 PLP-dependent aminotransferase family protein low > 81
Pseudomonas fluorescens GW456-L13 0.35 PfGW456L13_5082 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.26 PfGW456L13_4175 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) low > 87
Dickeya dianthicola ME23 0.35 DZA65_RS19035 carboxylating nicotinate-nucleotide diphosphorylase 0.27 DZA65_RS21720 PLP-dependent aminotransferase family protein low > 75
Pectobacterium carotovorum WPP14 0.35 HER17_RS03250 carboxylating nicotinate-nucleotide diphosphorylase 0.25 HER17_RS00520 PLP-dependent aminotransferase family protein low > 75
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_3346 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.26 Pf6N2E2_5813 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) low > 103
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS03065 carboxylating nicotinate-nucleotide diphosphorylase 0.38 QEN71_RS24660 PLP-dependent aminotransferase family protein low > 153
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_07370 nicotinate-nucleotide pyrophosphorylase 0.26 AO356_19495 GntR family transcriptional regulator low > 104
Herbaspirillum seropedicae SmR1 0.35 HSERO_RS11070 nicotinate-nucleotide pyrophosphorylase 0.37 HSERO_RS09050 2-aminoadipate aminotransferase low > 78
Enterobacter asburiae PDN3 0.35 EX28DRAFT_3702 nicotinate-nucleotide pyrophosphorylase [carboxylating] (EC 2.4.2.19) 0.27 EX28DRAFT_2740 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs low > 76
Pseudomonas sp. S08-1 0.35 OH686_16520 nicotinate-nucleotide diphosphorylase (carboxylating) 0.29 OH686_00615 Aspartate aminotransferase (AspB-4) low > 80
Castellaniella sp019104865 MT123 0.34 ABCV34_RS03695 carboxylating nicotinate-nucleotide diphosphorylase 0.38 ABCV34_RS13175 PLP-dependent aminotransferase family protein low > 48
Ralstonia solanacearum GMI1000 0.34 RS_RS12290 nicotinate-nucleotide diphosphorylase (carboxylating) 0.37 RS_RS04875 PLP-dependent aminotransferase family protein low > 80
Enterobacter sp. TBS_079 0.34 MPMX20_00800 Nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.26 MPMX20_03530 2-aminoadipate transaminase low > 85
Klebsiella michiganensis M5al 0.34 BWI76_RS04845 nicotinate-nucleotide pyrophosphorylase 0.27 BWI76_RS24235 Branched-chain-amino-acid transaminase (EC 2.6.1.42) (from data) low > 92
Rahnella sp. WP5 0.34 EX31_RS03515 carboxylating nicotinate-nucleotide diphosphorylase 0.27 EX31_RS14780 PLP-dependent aminotransferase family protein low > 89
Variovorax sp. OAS795 0.34 ABID97_RS07410 carboxylating nicotinate-nucleotide diphosphorylase 0.30 ABID97_RS17310 PLP-dependent aminotransferase family protein low > 91
Erwinia tracheiphila SCR3 0.34 LU632_RS03040 nadC carboxylating nicotinate-nucleotide diphosphorylase 0.08 LU632_RS00055 valine--pyruvate transaminase low > 74
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS15645 nicotinate-nucleotide pyrophosphorylase 0.37 BPHYT_RS05965 2-aminoadipate aminotransferase low > 109
Variovorax sp. SCN45 0.33 GFF2574 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.34 GFF1574 Alpha-aminoadipate aminotransferase (EC 2.6.1.39) @ Leucine transaminase (EC 2.6.1.6) @ Valine transaminase low > 127
Paraburkholderia graminis OAS925 0.33 ABIE53_003293 nicotinate-nucleotide pyrophosphorylase (carboxylating) 0.38 ABIE53_001399 2-aminoadipate transaminase low > 113
Serratia liquefaciens MT49 0.32 IAI46_03530 carboxylating nicotinate-nucleotide diphosphorylase 0.26 IAI46_00985 PLP-dependent aminotransferase family protein low > 86
Paraburkholderia bryophila 376MFSha3.1 0.31 H281DRAFT_04070 nicotinate-nucleotide pyrophosphorylase [carboxylating] 0.37 H281DRAFT_00271 2-aminoadipate transaminase low > 103
Desulfovibrio vulgaris Hildenborough JW710 0.31 DVU1807 nadC nicotinate-nucleotide pyrophosphorylase (TIGR) 0.30 DVU2364 aminotransferase, classes I and II (TIGR) — —
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.2009.1 Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) 0.37 Xcc-8004.2917.1 Valine--pyruvate aminotransferase (EC 2.6.1.66) low > 74
Methanococcus maripaludis S2 0.30 MMP_RS04560 carboxylating nicotinate-nucleotide diphosphorylase 0.37 MMP_RS00540 PLP-dependent aminotransferase family protein — —
Desulfovibrio vulgaris Miyazaki F 0.30 DvMF_0524 nicotinate-nucleotide pyrophosphorylase (RefSeq) 0.33 DvMF_3003 putative transcriptional regulator, GntR family (RefSeq) — —
Methanococcus maripaludis JJ 0.29 MMJJ_RS00575 carboxylating nicotinate-nucleotide diphosphorylase 0.37 MMJJ_RS04945 PLP-dependent aminotransferase family protein — —

Not shown: 47 genomes with orthologs for Atu4096 only; 1 genomes with orthologs for Atu2015 only