Conservation of cofitness between Atu2582 and Atu1646 in Agrobacterium fabrum C58

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu2582 UDP-glucose/GDP-mannose dehydrogenase 1.0 Atu1646 ABC transporter, nucleotide binding/ATPase protein 0.34 15
Rhizobium sp. OAE497 0.75 ABIE40_RS19745 nucleotide sugar dehydrogenase 0.70 ABIE40_RS10425 ABC transporter ATP-binding protein 0.66 74
Sinorhizobium meliloti 1021 0.75 SM_b21256 nucleotide sugar oxidase 0.68 SMc00175 ABC transporter ATP-binding protein low > 103
Bosea sp. OAE506 0.62 ABIE41_RS14415 nucleotide sugar dehydrogenase 0.51 ABIE41_RS21895 ATP-binding cassette domain-containing protein 0.71 72
Azospirillum brasilense Sp245 0.61 AZOBR_RS23650 UDP-N-acetyl-D-glucosamine dehydrogenase 0.48 AZOBR_RS21490 iron ABC transporter ATP-binding protein
Azospirillum sp. SherDot2 0.59 MPMX19_06712 UDP-N-acetyl-D-glucosamine 6-dehydrogenase 0.49 MPMX19_06116 putative ribonucleotide transport ATP-binding protein mkl low > 112
Pseudomonas fluorescens FW300-N2C3 0.52 AO356_03420 UDP-N-acetyl-D-glucosamine dehydrogenase 0.45 AO356_11380 ABC transporter ATP-binding protein low > 104
Desulfovibrio vulgaris Hildenborough JW710 0.30 DVU3176 UDP-glucose/GDP-mannose dehydrogenase family protein (TIGR) 0.51 DVU0611 ABC transporter, ATP-binding protein (TIGR)
Xanthomonas campestris pv. campestris strain 8004 0.29 Xcc-8004.2607.1 Polysaccharide biosynthetic protein 0.49 Xcc-8004.4465.1 ABC transporter ATP-binding protein USSDB6B low > 74
Desulfovibrio vulgaris Miyazaki F 0.28 DvMF_2494 nucleotide sugar dehydrogenase (RefSeq) 0.47 DvMF_1504 ABC transporter related (RefSeq) low > 51
Lysobacter sp. OAE881 0.27 ABIE51_RS07835 Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB 0.47 ABIE51_RS04415 ABC transporter ATP-binding protein low > 62
Acinetobacter radioresistens SK82 0.27 MPMX26_00050 UDP-N-acetyl-D-glucosamine 6-dehydrogenase 0.31 MPMX26_02741 Intermembrane phospholipid transport system ATP-binding protein MlaF 0.47 26
Marinobacter adhaerens HP15 0.27 HP15_p187g68 UDP-glucose/GDP-mannose dehydrogenase family protein 0.48 HP15_1571 ATP-binding component of ABC transporter low > 73
Dyella japonica UNC79MFTsu3.2 0.27 ABZR86_RS16180 Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB 0.42 ABZR86_RS18855 ATP-binding cassette domain-containing protein low > 74
Castellaniella sp019104865 MT123 0.27 ABCV34_RS09370 Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB 0.31 ABCV34_RS11180 ABC transporter ATP-binding protein
Magnetospirillum magneticum AMB-1 0.27 AMB_RS00730 nucleotide sugar dehydrogenase 0.36 AMB_RS01675 ABC transporter ATP-binding protein
Burkholderia phytofirmans PsJN 0.27 BPHYT_RS23345 nucleotide sugar dehydrogenase 0.40 BPHYT_RS02385 ABC transporter ATP-binding protein
Shewanella oneidensis MR-1 0.27 SO3190 polysaccharide biosynthesis protein (NCBI ptt file) 0.27 SO3954 ABC transporter, ATP-binding protein, putative (NCBI ptt file) low > 76
Rhodanobacter denitrificans FW104-10B01 0.27 LRK54_RS11970 nucleotide sugar dehydrogenase 0.30 LRK54_RS11760 ATP-binding cassette domain-containing protein low > 59
Herbaspirillum seropedicae SmR1 0.26 HSERO_RS13730 UDP-N-acetyl-D-galactosamine dehydrogenase 0.44 HSERO_RS14475 iron ABC transporter ATP-binding protein low > 78
Rhodanobacter denitrificans MT42 0.26 LRK55_RS11695 nucleotide sugar dehydrogenase 0.30 LRK55_RS11485 ATP-binding cassette domain-containing protein low > 63
Variovorax sp. OAS795 0.26 ABID97_RS02195 nucleotide sugar dehydrogenase 0.36 ABID97_RS04005 ATP-binding cassette domain-containing protein low > 91
Rhodanobacter sp. FW510-T8 0.26 OKGIIK_11915 wecC Vi polysaccharide biosynthesis protein VipA/TviB 0.29 OKGIIK_12135 mlaF ABC transporter ATP-binding protein low > 52
Mucilaginibacter yixingensis YX-36 DSM 26809 0.26 ABZR88_RS08975 nucleotide sugar dehydrogenase 0.31 ABZR88_RS20595 ABC transporter ATP-binding protein low > 71
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_2513 UDP-glucose dehydrogenase (EC 1.1.1.22) 0.44 Pf6N2E2_4144 ABC transporter ATP-binding protein USSDB6B low > 103
Paraburkholderia graminis OAS925 0.25 ABIE53_000508 UDP-N-acetyl-D-galactosamine dehydrogenase 0.40 ABIE53_000620 phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein low > 113
Sphingomonas koreensis DSMZ 15582 0.25 Ga0059261_3106 nucleotide sugar dehydrogenase 0.49 Ga0059261_1870 ABC-type transport system involved in resistance to organic solvents, ATPase component
Phaeobacter inhibens DSM 17395 0.24 PGA1_262p02300 UDP-glucose/GDP-mannose dehydrogenase 0.26 PGA1_c10860 putative ABC transporter, ATP binding protein 0.50 13
Vibrio cholerae E7946 ATCC 55056 0.23 CSW01_04710 UDP-N-acetyl-D-mannosamine dehydrogenase 0.25 CSW01_12775 phospholipid ABC transporter ATP-binding protein MlaF low > 62
Enterobacter asburiae PDN3 0.23 EX28DRAFT_4457 nucleotide sugar dehydrogenase 0.27 EX28DRAFT_3249 ABC-type transport system involved in resistance to organic solvents, ATPase component low > 76
Escherichia coli Nissle 1917 0.23 ECOLIN_RS21740 UDP-N-acetyl-D-mannosamine dehydrogenase 0.26 ECOLIN_RS18390 phospholipid ABC transporter ATP-binding protein MlaF low > 52
Escherichia coli ECRC102 0.23 NIAGMN_12320 wecC UDP-N-acetyl-D-mannosamine dehydrogenase 0.26 NIAGMN_15735 mlaF phospholipid ABC transporter ATP-binding protein MlaF
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_04267 UDP-N-acetyl-D-mannosamine dehydrogenase 0.26 OHPLBJKB_00505 putative phospholipid import ATP-binding protein MlaF low > 73
Escherichia coli ECRC62 0.23 BNILDI_04825 wecC UDP-N-acetyl-D-mannosamine dehydrogenase 0.26 BNILDI_01760 mlaF phospholipid ABC transporter ATP-binding protein MlaF
Escherichia coli ECRC98 0.23 JDDGAC_18190 wecC UDP-N-acetyl-D-mannosamine dehydrogenase 0.26 JDDGAC_21600 mlaF phospholipid ABC transporter ATP-binding protein MlaF
Escherichia coli ECOR38 0.23 HEPCGN_13275 wecC UDP-N-acetyl-D-mannosamine dehydrogenase 0.26 HEPCGN_16850 mlaF phospholipid ABC transporter ATP-binding protein MlaF 0.81 57
Escherichia coli BL21 0.23 ECD_03665 UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase 0.26 ECD_03060 ABC transporter maintaining OM lipid asymmetry, ATP-binding protein low > 60
Escherichia coli ECRC101 0.23 MCAODC_05070 wecC UDP-N-acetyl-D-mannosamine dehydrogenase 0.26 MCAODC_08495 mlaF phospholipid ABC transporter ATP-binding protein MlaF
Escherichia coli ECRC101 0.23 OKFHMN_14565 wecC UDP-N-acetyl-D-mannosamine dehydrogenase 0.26 OKFHMN_17975 mlaF phospholipid ABC transporter ATP-binding protein MlaF
Escherichia coli BW25113 0.23 b3787 rffD UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase (NCBI) 0.26 b3195 yrbF predicted toluene transporter subunit: ATP-binding component of ABC superfamily (NCBI) low > 76
Escherichia coli ECRC99 0.23 KEDOAH_13585 wecC UDP-N-acetyl-D-mannosamine dehydrogenase 0.26 KEDOAH_10175 mlaF phospholipid ABC transporter ATP-binding protein MlaF
Escherichia coli ECOR27 0.23 NOLOHH_06700 wecC UDP-N-acetyl-D-mannosamine dehydrogenase 0.26 NOLOHH_09775 mlaF phospholipid ABC transporter ATP-binding protein MlaF low > 57
Enterobacter sp. TBS_079 0.23 MPMX20_04486 UDP-N-acetyl-D-mannosamine dehydrogenase 0.28 MPMX20_04101 Intermembrane phospholipid transport system ATP-binding protein MlaF low > 85
Ralstonia solanacearum UW163 0.23 UW163_RS20035 UDP-N-acetyl-D-mannosamine dehydrogenase 0.42 UW163_RS02865 ABC transporter ATP-binding protein
Ralstonia solanacearum IBSBF1503 0.23 RALBFv3_RS19095 UDP-N-acetyl-D-mannosamine dehydrogenase 0.42 RALBFv3_RS10715 ABC transporter ATP-binding protein low > 76
Escherichia fergusonii Becca 0.23 EFB2_04852 UDP-N-acetyl-D-mannosamine dehydrogenase 0.26 EFB2_00628 Intermembrane phospholipid transport system ATP-binding protein MlaF 0.47 39
Ralstonia solanacearum GMI1000 0.23 RS_RS22025 UDP-N-acetyl-D-mannosamine dehydrogenase 0.41 RS_RS01545 ABC transporter ATP-binding protein low > 80
Klebsiella michiganensis M5al 0.23 BWI76_RS01095 UDP-N-acetyl-D-mannosamine dehydrogenase 0.27 BWI76_RS25230 phospholipid ABC transporter ATP-binding protein MlaF low > 92
Paraburkholderia sabiae LMG 24235 0.23 QEN71_RS40735 UDP-N-acetyl-D-mannosamine dehydrogenase 0.39 QEN71_RS01270 ATP-binding cassette domain-containing protein low > 153
Rahnella sp. WP5 0.23 EX31_RS15070 UDP-N-acetyl-D-mannosamine dehydrogenase 0.30 EX31_RS12435 phospholipid ABC transporter ATP-binding protein MlaF low > 89
Serratia liquefaciens MT49 0.23 IAI46_00605 UDP-N-acetyl-D-mannosamine dehydrogenase 0.27 IAI46_22430 phospholipid ABC transporter ATP-binding protein MlaF low > 86
Pseudomonas sp. S08-1 0.23 OH686_14390 UDP-N-acetyl-D-mannosamine dehydrogenase 0.31 OH686_08510 Phospholipid ABC transporter ATP-binding protein MlaF 0.81 25
Shewanella amazonensis SB2B 0.22 Sama_2260 UDP-glucose/GDP-mannose dehydrogenase (RefSeq) 0.28 Sama_3081 ABC transporter, ATP-binding protein, putative (RefSeq) low > 62
Erwinia tracheiphila SCR3 0.22 LU632_RS24235 wecC UDP-N-acetyl-D-mannosamine dehydrogenase 0.25 LU632_RS21245 mlaF phospholipid ABC transporter ATP-binding protein MlaF low > 74
Ralstonia solanacearum PSI07 0.22 RPSI07_RS04505 UDP-N-acetyl-D-mannosamine dehydrogenase 0.42 RPSI07_RS22605 ABC transporter ATP-binding protein low > 81
Pseudomonas fluorescens GW456-L13 0.22 PfGW456L13_3996 UDP-glucose dehydrogenase (EC 1.1.1.22) 0.43 PfGW456L13_629 ABC transporter ATP-binding protein USSDB6B low > 87
Pantoea sp. MT58 0.22 IAI47_18505 UDP-N-acetyl-D-mannosamine dehydrogenase 0.29 IAI47_17145 phospholipid ABC transporter ATP-binding protein MlaF low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.22 GFF2886 UDP-glucose dehydrogenase (EC 1.1.1.22) 0.27 GFF2939 Uncharacterized ABC transporter, ATP-binding protein YrbF low > 78
Pectobacterium carotovorum WPP14 0.21 HER17_RS01160 UDP-N-acetyl-D-mannosamine dehydrogenase 0.27 HER17_RS20025 phospholipid ABC transporter ATP-binding protein MlaF low > 75
Pseudomonas sp. RS175 0.21 PFR28_00917 UDP-N-acetyl-D-mannosamine dehydrogenase 0.44 PFR28_04642 putative ribonucleotide transport ATP-binding protein mkl low > 88
Dickeya dadantii 3937 0.20 DDA3937_RS20050 UDP-N-acetyl-D-mannosamine dehydrogenase 0.26 DDA3937_RS01565 phospholipid ABC transporter ATP-binding protein MlaF low > 74
Dickeya dianthicola ME23 0.20 DZA65_RS21240 UDP-N-acetyl-D-mannosamine dehydrogenase 0.25 DZA65_RS01545 phospholipid ABC transporter ATP-binding protein MlaF low > 75
Dickeya dianthicola 67-19 0.20 HGI48_RS20195 UDP-N-acetyl-D-mannosamine dehydrogenase 0.25 HGI48_RS01480 phospholipid ABC transporter ATP-binding protein MlaF low > 71

Not shown: 10 genomes with orthologs for Atu2582 only; 25 genomes with orthologs for Atu1646 only