Conservation of cofitness between Atu0401 and Atu1464 in Agrobacterium fabrum C58

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu0401 fructokinase 1.0 Atu1464 glycine cleavage system T protein, aminomethyltransferase 0.30 17
Rhizobium sp. OAE497 0.76 ABIE40_RS02140 carbohydrate kinase 0.81 ABIE40_RS09940 glycine cleavage system aminomethyltransferase GcvT — —
Sinorhizobium meliloti 1021 0.75 SMc02164 fructokinase 0.76 SMc02047 glycine cleavage system aminomethyltransferase T low > 103
Klebsiella michiganensis M5al 0.59 BWI76_RS14875 ribokinase-like domain-containing protein 0.21 BWI76_RS23880 Aminomethyltransferase (EC 2.1.2.10) (from data) low > 92
Dinoroseobacter shibae DFL-12 0.50 Dshi_2797 Fructokinase (EC 2.7.1.4) (from data) 0.40 Dshi_2682 glycine cleavage system T protein (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.40 PGA1_c28020 fructokinase Frk 0.53 PGA1_78p00290 aminomethyltransferase GcvT — —
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_4844 Fructokinase (EC 2.7.1.4) 0.53 Pf1N1B4_623 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) — —
Pseudomonas sp. RS175 0.32 PFR28_01707 Fructokinase 0.56 PFR28_03385 Aminomethyltransferase low > 88
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_804 Fructokinase (EC 2.7.1.4) 0.55 Pf6N2E2_5556 Aminomethyltransferase (EC 2.1.2.10) (from data) low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_2434 Carbohydrate kinase, PfkB 0.58 Psyr_1095 Glycine cleavage system T protein low > 86
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_2434 Carbohydrate kinase, PfkB 0.58 Psyr_1095 Glycine cleavage system T protein low > 86
Pseudomonas fluorescens SBW25-INTG 0.30 PFLU_RS13375 carbohydrate kinase 0.55 PFLU_RS24010 glycine cleavage system aminomethyltransferase GcvT low > 109
Pseudomonas fluorescens SBW25 0.30 PFLU_RS13375 carbohydrate kinase 0.55 PFLU_RS24010 glycine cleavage system aminomethyltransferase GcvT low > 109
Pseudomonas fluorescens FW300-N2E3 0.30 AO353_25910 Fructokinase (EC 2.7.1.4) (from data) 0.54 AO353_03510 glycine cleavage system protein T low > 101
Pseudomonas fluorescens GW456-L13 0.30 PfGW456L13_3036 Fructokinase (EC 2.7.1.4) (from data) 0.53 PfGW456L13_1866 Aminomethyltransferase (EC 2.1.2.10) (from data) low > 87
Pseudomonas simiae WCS417 0.30 PS417_12685 fructokinase 0.55 PS417_22370 Aminomethyltransferase (EC 2.1.2.10) (from data) — —
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_27700 fructokinase 0.56 AO356_18160 glycine cleavage system protein T low > 104
Variovorax sp. SCN45 0.29 GFF5279 Fructokinase (EC 2.7.1.4) 0.49 GFF6476 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) low > 127
Azospirillum sp. SherDot2 0.21 MPMX19_03654 Fructokinase 0.53 MPMX19_01029 Aminomethyltransferase low > 112
Alteromonas macleodii MIT1002 0.20 MIT1002_03770 5-dehydro-2-deoxygluconokinase 0.21 MIT1002_02973 Aminomethyltransferase low > 70
Bosea sp. OAE506 0.19 ABIE41_RS03440 PfkB family carbohydrate kinase 0.48 ABIE41_RS22930 glycine cleavage system aminomethyltransferase GcvT low > 77
Burkholderia phytofirmans PsJN 0.18 BPHYT_RS02045 Fructokinase (EC 2.7.1.4) (from data) 0.25 BPHYT_RS19320 glycine cleavage system protein T 0.25 73
Escherichia coli ECOR38 0.18 HEPCGN_19180 aminoimidazole riboside kinase 0.23 HEPCGN_18810 gcvT glycine cleavage system aminomethyltransferase GcvT low > 85
Dyella japonica UNC79MFTsu3.2 0.18 ABZR86_RS11105 Fructokinase (EC 2.7.1.4) (from data) 0.24 ABZR86_RS18875 glycine cleavage system aminomethyltransferase GcvT 0.45 18
Paraburkholderia bryophila 376MFSha3.1 0.18 H281DRAFT_02118 fructokinase 0.24 H281DRAFT_02411 aminomethyltransferase low > 103
Acidovorax sp. GW101-3H11 0.18 Ac3H11_2936 Fructokinase (EC 2.7.1.4) 0.53 Ac3H11_165 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) low > 79
Dickeya dianthicola ME23 0.18 DZA65_RS01855 aminoimidazole riboside kinase 0.22 DZA65_RS03435 glycine cleavage system aminomethyltransferase GcvT low > 75
Dickeya dianthicola 67-19 0.18 HGI48_RS01780 aminoimidazole riboside kinase 0.22 HGI48_RS03390 glycine cleavage system aminomethyltransferase GcvT low > 71
Escherichia coli ECRC98 0.17 JDDGAC_26430 cscK aminoimidazole riboside kinase 0.23 JDDGAC_23160 gcvT glycine cleavage system aminomethyltransferase GcvT — —
Escherichia coli ECOR27 0.17 NOLOHH_14150 cscK aminoimidazole riboside kinase 0.23 NOLOHH_11435 gcvT glycine cleavage system aminomethyltransferase GcvT low > 57
Escherichia coli ECRC101 0.17 MCAODC_13000 cscK aminoimidazole riboside kinase 0.23 MCAODC_10040 gcvT glycine cleavage system aminomethyltransferase GcvT — —
Escherichia coli ECRC62 0.17 BNILDI_13005 cscK aminoimidazole riboside kinase 0.23 BNILDI_09970 gcvT glycine cleavage system aminomethyltransferase GcvT — —
Paraburkholderia graminis OAS925 0.17 ABIE53_000553 fructokinase 0.24 ABIE53_000236 aminomethyltransferase low > 113
Escherichia coli ECRC102 0.17 NIAGMN_20245 cscK aminoimidazole riboside kinase 0.23 NIAGMN_17285 gcvT glycine cleavage system aminomethyltransferase GcvT — —
Escherichia coli ECRC101 0.17 OKFHMN_22470 cscK aminoimidazole riboside kinase 0.23 OKFHMN_19520 gcvT glycine cleavage system aminomethyltransferase GcvT — —
Pectobacterium carotovorum WPP14 0.17 HER17_RS19640 aminoimidazole riboside kinase 0.21 HER17_RS18005 glycine cleavage system aminomethyltransferase GcvT low > 75
Rhodanobacter denitrificans MT42 0.17 LRK55_RS04840 carbohydrate kinase 0.24 LRK55_RS05280 glycine cleavage system aminomethyltransferase GcvT low > 63
Rhodanobacter denitrificans FW104-10B01 0.17 LRK54_RS05060 carbohydrate kinase 0.24 LRK54_RS05510 glycine cleavage system aminomethyltransferase GcvT low > 59
Parabacteroides merdae CL09T00C40 0.17 HMPREF1078_RS06005 carbohydrate kinase 0.26 HMPREF1078_RS10420 glycine cleavage system aminomethyltransferase GcvT low > 61
Pantoea sp. MT58 0.17 IAI47_21870 aminoimidazole riboside kinase 0.22 IAI47_03765 glycine cleavage system aminomethyltransferase GcvT low > 76
Erwinia tracheiphila SCR3 0.17 LU632_RS03295 aminoimidazole riboside kinase 0.22 LU632_RS05905 gcvT glycine cleavage system aminomethyltransferase GcvT low > 74
Rhodanobacter sp. FW510-T8 0.16 OKGIIK_01685 rbsK carbohydrate kinase 0.23 OKGIIK_01305 gcvT glycine cleavage system aminomethyltransferase GcvT low > 52
Shewanella amazonensis SB2B 0.16 Sama_0291 carbohydrate kinase (RefSeq) 0.23 Sama_2721 gcvT glycine cleavage system aminomethyltransferase T (RefSeq) low > 62
Paraburkholderia sabiae LMG 24235 0.16 QEN71_RS00975 carbohydrate kinase 0.25 QEN71_RS29205 glycine cleavage system aminomethyltransferase GcvT low > 153
Ralstonia solanacearum PSI07 0.16 RPSI07_RS04910 carbohydrate kinase 0.21 RPSI07_RS08585 glycine cleavage system protein T low > 81
Shewanella sp. ANA-3 0.15 Shewana3_0069 Fructokinase (EC 2.7.1.4) (from data) 0.25 Shewana3_3501 gcvT glycine cleavage system aminomethyltransferase T (RefSeq) low > 73
Ralstonia solanacearum UW163 0.15 UW163_RS20450 carbohydrate kinase 0.21 UW163_RS04960 glycine cleavage system protein T — —
Ralstonia solanacearum IBSBF1503 0.15 RALBFv3_RS18680 carbohydrate kinase 0.21 RALBFv3_RS08650 glycine cleavage system protein T low > 76
Ralstonia solanacearum GMI1000 0.15 RS_RS23325 carbohydrate kinase 0.21 RS_RS16500 aminomethyltransferase low > 80
Ralstonia sp. UNC404CL21Col 0.14 ABZR87_RS18655 carbohydrate kinase 0.21 ABZR87_RS03925 glycine cleavage system aminomethyltransferase GcvT low > 80
Xanthomonas campestris pv. campestris strain 8004 0.14 Xcc-8004.3385.1 Fructokinase in mannoside utilization gene cluster (EC 2.7.1.4) 0.22 Xcc-8004.1567.1 Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) low > 74
Cupriavidus basilensis FW507-4G11 0.14 RR42_RS03385 sugar kinase 0.23 RR42_RS20060 glycine cleavage system protein T low > 128
Phocaeicola dorei CL03T12C01 0.14 ABI39_RS05105 carbohydrate kinase 0.26 ABI39_RS18950 glycine cleavage system aminomethyltransferase GcvT low > 72
Phocaeicola vulgatus CL09T03C04 0.13 HMPREF1058_RS11800 carbohydrate kinase 0.26 HMPREF1058_RS04685 glycine cleavage system aminomethyltransferase GcvT low > 67
Bacteroides thetaiotaomicron VPI-5482 0.13 BT3305 fructokinase (NCBI ptt file) 0.26 BT4584 putative aminomethyltransferase (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.13 BACOVA_00909 kinase, PfkB family 0.25 BACOVA_05378 aminomethyltransferase low > 94
Bacteroides stercoris CC31F 0.12 HMPREF1181_RS02185 carbohydrate kinase 0.25 HMPREF1181_RS13255 glycine cleavage system aminomethyltransferase GcvT low > 56
Mucilaginibacter yixingensis YX-36 DSM 26809 0.11 ABZR88_RS03755 carbohydrate kinase 0.28 ABZR88_RS21210 glycine cleavage system aminomethyltransferase GcvT — —

Not shown: 2 genomes with orthologs for Atu0401 only; 38 genomes with orthologs for Atu1464 only