| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas fluorescens FW300-N2C3 | 1.0 | AO356_04350 | | glutamine amidotransferase | 1.0 | AO356_07360 | | N-acetyl-anhydromuranmyl-L-alanine amidase | 0.34 | 12 |
| Pseudomonas fluorescens FW300-N2E2 | 1.00 | Pf6N2E2_2711 | | Glutamine amidotransferase, class-II | 0.99 | Pf6N2E2_3344 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD | low | > 103 |
| Pseudomonas sp. RS175 | 0.98 | PFR28_00725 | | Putative glutamine amidotransferase YafJ | 0.96 | PFR28_00100 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 88 |
| Pseudomonas fluorescens FW300-N1B4 | 0.96 | Pf1N1B4_3359 | | Glutamine amidotransferase, class-II | 0.90 | Pf1N1B4_1151 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.95 | PfGW456L13_4482 | | Glutamine amidotransferase, class-II | 0.87 | PfGW456L13_5081 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.95 | AO353_17960 | | glutamine amidotransferase | 0.88 | AO353_05510 | | N-acetyl-anhydromuranmyl-L-alanine amidase | low | > 101 |
| Pseudomonas fluorescens SBW25 | 0.93 | PFLU_RS07540 | | class II glutamine amidotransferase | 0.87 | PFLU_RS03980 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.93 | PFLU_RS07540 | | class II glutamine amidotransferase | 0.87 | PFLU_RS03980 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 109 |
| Pseudomonas simiae WCS417 | 0.93 | PS417_07455 | | glutamine amidotransferase | 0.86 | PS417_03935 | | N-acetyl-anhydromuranmyl-L-alanine amidase | low | > 88 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.93 | Psyr_1576 | | Glutamine amidotransferase, class-II | 0.85 | Psyr_0817 | | N-acetylmuramoyl-L-alanine amidase, family 2 | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.93 | Psyr_1576 | | Glutamine amidotransferase, class-II | 0.85 | Psyr_0817 | | N-acetylmuramoyl-L-alanine amidase, family 2 | low | > 86 |
| Pseudomonas putida KT2440 | 0.88 | PP_4581 | | putative amidotransferase | 0.72 | PP_0789 | | N-acetyl-anhydromuramyl-L-alanine-amidase | low | > 96 |
| Pseudomonas sp. S08-1 | 0.87 | OH686_05255 | | Putative glutamine amidotransferase YafJ | 0.77 | OH686_16530 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.79 | Psest_1849 | | Predicted glutamine amidotransferase | 0.77 | Psest_0725 | | Negative regulator of beta-lactamase expression | low | > 67 |
| Marinobacter adhaerens HP15 | 0.67 | HP15_3871 | | glutamine amidotransferase class-II | 0.56 | HP15_1307 | | N-acetyl-anhydromuranmyl-L-alanine amidase | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.61 | CSW01_11360 | | class II glutamine amidotransferase | 0.51 | CSW01_12260 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 62 |
| Shewanella sp. ANA-3 | 0.60 | Shewana3_2322 | | glutamine amidotransferase, class-II (RefSeq) | 0.55 | Shewana3_0423 | | N-acetyl-anhydromuranmyl-L-alanine amidase (RefSeq) | low | > 73 |
| Shewanella amazonensis SB2B | 0.60 | Sama_1869 | | amidotransferase (RefSeq) | 0.59 | Sama_0372 | | N-acetyl-anhydromuranmyl-L-alanine amidase (RefSeq) | low | > 62 |
| Shewanella loihica PV-4 | 0.60 | Shew_2107 | | glutamine amidotransferase, class-II (RefSeq) | 0.54 | Shew_3434 | | N-acetyl-anhydromuranmyl-L-alanine amidase (RefSeq) | — | — |
| Shewanella oneidensis MR-1 | 0.60 | SO2535 | | hypothetical amidotransferase (NCBI ptt file) | 0.54 | SO0421 | ampD | AmpD protein (NCBI ptt file) | low | > 76 |
| Enterobacter sp. TBS_079 | 0.59 | MPMX20_00912 | | Putative glutamine amidotransferase YafJ | 0.53 | MPMX20_00801 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 85 |
| Escherichia coli BW25113 | 0.59 | b0223 | yafJ | predicted amidotransfease (NCBI) | 0.50 | b0110 | ampD | N-acetyl-anhydromuranmyl-L-alanine amidase (NCBI) | low | > 76 |
| Escherichia coli ECRC62 | 0.59 | BNILDI_00335 | yafJ | Putative glutamine amidotransferase YafJ | 0.50 | BNILDI_08740 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 75 |
| Escherichia coli ECOR38 | 0.59 | HEPCGN_07875 | yafJ | Putative glutamine amidotransferase YafJ | 0.51 | HEPCGN_08505 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 87 |
| Escherichia coli Nissle 1917 | 0.59 | ECOLIN_RS01755 | | class II glutamine amidotransferase | 0.51 | ECOLIN_RS00590 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 55 |
| Escherichia coli BL21 | 0.59 | ECD_00218 | | type 2 glutamine amidotransferase family protein | 0.50 | ECD_00109 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase, Zn-dependent; murein amidase | low | > 61 |
| Escherichia coli ECOR27 | 0.59 | NOLOHH_02140 | yafJ | Putative glutamine amidotransferase YafJ | 0.50 | NOLOHH_02870 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 75 |
| Enterobacter asburiae PDN3 | 0.59 | EX28DRAFT_2666 | | Predicted glutamine amidotransferase | 0.52 | EX28DRAFT_3703 | | N-acetylmuramoyl-L-alanine amidase | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.59 | OHPLBJKB_03416 | | Putative glutamine amidotransferase YafJ | 0.50 | OHPLBJKB_03551 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 73 |
| Escherichia fergusonii Becca | 0.59 | EFB2_03794 | | Putative glutamine amidotransferase YafJ | 0.51 | EFB2_03939 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 86 |
| Escherichia coli ECRC99 | 0.59 | KEDOAH_18385 | yafJ | class II glutamine amidotransferase | 0.51 | KEDOAH_17630 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.59 | GFF4102 | | Predicted glutamine amidotransferase | 0.50 | GFF129 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD | low | > 78 |
| Rahnella sp. WP5 | 0.59 | EX31_RS21015 | | class II glutamine amidotransferase | 0.52 | EX31_RS03510 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 89 |
| Escherichia coli ECRC100 | 0.59 | OKFHMN_09770 | yafJ | class II glutamine amidotransferase | 0.51 | OKFHMN_10525 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 80 |
| Escherichia coli ECRC101 | 0.59 | MCAODC_00290 | yafJ | class II glutamine amidotransferase | 0.51 | MCAODC_01040 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | 0.59 | 44 |
| Escherichia coli ECRC98 | 0.59 | JDDGAC_13395 | yafJ | class II glutamine amidotransferase | 0.51 | JDDGAC_14120 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 86 |
| Klebsiella michiganensis M5al | 0.59 | BWI76_RS05480 | | class II glutamine amidotransferase | 0.53 | BWI76_RS04850 | | N-acetylmuramoyl-L-alanine amidase | low | > 92 |
| Escherichia coli ECRC102 | 0.59 | NIAGMN_07630 | yafJ | class II glutamine amidotransferase | 0.51 | NIAGMN_08375 | ampD | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | — | — |
| Serratia liquefaciens MT49 | 0.58 | IAI46_04345 | | class II glutamine amidotransferase | 0.48 | IAI46_03535 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 86 |
| Pectobacterium carotovorum WPP14 | 0.57 | HER17_RS04650 | | class II glutamine amidotransferase | 0.57 | HER17_RS03260 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 75 |
| Dickeya dianthicola ME23 | 0.57 | DZA65_RS17745 | | class II glutamine amidotransferase | 0.55 | DZA65_RS19020 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 75 |
| Dickeya dianthicola 67-19 | 0.57 | HGI48_RS16655 | | class II glutamine amidotransferase | 0.55 | HGI48_RS17875 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 71 |
| Pantoea sp. MT58 | 0.57 | IAI47_15185 | | class II glutamine amidotransferase | 0.50 | IAI47_15840 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 76 |
| Dickeya dadantii 3937 | 0.57 | DDA3937_RS16585 | | class II glutamine amidotransferase | 0.55 | DDA3937_RS17945 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 74 |
| Herbaspirillum seropedicae SmR1 | 0.51 | HSERO_RS24040 | | glutamine amidotransferase | 0.54 | HSERO_RS01880 | | N-acetyl-anhydromuranmyl-L-alanine amidase | low | > 78 |
| Dechlorosoma suillum PS | 0.51 | Dsui_1425 | | putative glutamine amidotransferase | 0.48 | Dsui_0134 | | negative regulator of beta-lactamase expression | low | > 51 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.51 | H281DRAFT_04266 | | glutamine amidotransferase | 0.51 | H281DRAFT_06273 | | AmpD protein | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.51 | ABIE53_003506 | | putative glutamine amidotransferase | 0.51 | ABIE53_003579 | | AmpD protein | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.50 | QEN71_RS26860 | | class II glutamine amidotransferase | 0.51 | QEN71_RS27225 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 153 |
| Cupriavidus basilensis FW507-4G11 | 0.50 | RR42_RS02595 | | glutamine amidotransferase | 0.53 | RR42_RS17865 | | N-acetyl-anhydromuranmyl-L-alanine amidase | low | > 128 |
| Burkholderia phytofirmans PsJN | 0.49 | BPHYT_RS16680 | | glutamine amidotransferase | 0.51 | BPHYT_RS17065 | | N-acetyl-anhydromuranmyl-L-alanine amidase | — | — |
| Acinetobacter radioresistens SK82 | 0.49 | MPMX26_02412 | | Putative glutamine amidotransferase YafJ | 0.51 | MPMX26_00043 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 36 |
| Ralstonia solanacearum PSI07 | 0.48 | RPSI07_RS21635 | | class II glutamine amidotransferase | 0.52 | RPSI07_RS11160 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | — | — |
| Variovorax sp. OAS795 | 0.48 | ABID97_RS04635 | | class II glutamine amidotransferase | 0.45 | ABID97_RS06410 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | — | — |
| Ralstonia solanacearum GMI1000 | 0.48 | RS_RS02405 | | class II glutamine amidotransferase | 0.53 | RS_RS14030 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.48 | RALBFv3_RS11575 | | class II glutamine amidotransferase | 0.55 | RALBFv3_RS06080 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | — | — |
| Ralstonia solanacearum UW163 | 0.48 | UW163_RS02010 | | class II glutamine amidotransferase | 0.55 | UW163_RS07545 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | — | — |
| Ralstonia sp. UNC404CL21Col | 0.48 | ABZR87_RS07540 | | class II glutamine amidotransferase | 0.51 | ABZR87_RS01745 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 80 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.47 | GFF3024 | | Glutamine amidotransferase, class-II | 0.48 | GFF594 | | N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) AmpD | — | — |
| Variovorax sp. SCN45 | 0.46 | GFF6320 | | Putative glutamine amidotransferase YafJ | 0.45 | GFF4433 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase | low | > 127 |
| Castellaniella sp019104865 MT123 | 0.44 | ABCV34_RS06215 | | class II glutamine amidotransferase | 0.52 | ABCV34_RS09025 | | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | low | > 48 |
Not shown: 4 genomes with orthologs for AO356_04350 only; 3 genomes with orthologs for AO356_07360 only