Conservation of cofitness between AMB_RS18835 and AMB_RS08405 in Magnetospirillum magneticum AMB-1

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Magnetospirillum magneticum AMB-1 1.0 AMB_RS18835 cytochrome b 1.0 AMB_RS08405 bile acid:sodium symporter 0.63 4
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_29080 cytochrome B 0.39 AO353_13885 bile acid:sodium symporter low > 101
Ralstonia solanacearum UW163 0.34 UW163_RS07910 cytochrome b 0.40 UW163_RS08520 bile acid:sodium symporter — —
Ralstonia solanacearum IBSBF1503 0.34 RALBFv3_RS05715 cytochrome b 0.41 RALBFv3_RS05105 bile acid:sodium symporter low > 76
Sphingomonas koreensis DSMZ 15582 0.34 Ga0059261_3980 Cytochrome B561 0.32 Ga0059261_2930 Predicted Na+-dependent transporter low > 68
Acinetobacter radioresistens SK82 0.33 MPMX26_01603 Cytochrome b561 0.32 MPMX26_01062 hypothetical protein — —
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS01310 cytochrome b 0.45 ABZR87_RS00755 bile acid:sodium symporter family protein low > 80
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS29045 cytochrome B561 0.30 BPHYT_RS02065 membrane protein low > 109
Ralstonia solanacearum GMI1000 0.33 RS_RS13605 cytochrome b 0.43 RS_RS12725 bile acid:sodium symporter low > 80
Paraburkholderia bryophila 376MFSha3.1 0.33 H281DRAFT_01400 cytochrome b561 0.32 H281DRAFT_02114 solute carrier family 10 (sodium/bile acid cotransporter), member 7 low > 103
Ralstonia solanacearum PSI07 0.33 RPSI07_RS11585 cytochrome b 0.42 RPSI07_RS12190 bile acid:sodium symporter low > 81
Rhodanobacter denitrificans MT42 0.32 LRK55_RS05015 cytochrome b 0.30 LRK55_RS06805 bile acid:sodium symporter family protein low > 63
Paraburkholderia sabiae LMG 24235 0.32 QEN71_RS16665 cytochrome b 0.33 QEN71_RS00995 bile acid:sodium symporter family protein low > 153
Xanthomonas campestris pv. campestris strain 8004 0.31 Xcc-8004.1605.1 Cytochrome B561 0.37 Xcc-8004.4834.1 Sodium - Bile acid symporter low > 74
Brevundimonas sp. GW460-12-10-14-LB2 0.31 A4249_RS06105 cytochrome b 0.35 A4249_RS15185 bile acid:sodium symporter low > 48
Herbaspirillum seropedicae SmR1 0.30 HSERO_RS03420 cytochrome B561 0.36 HSERO_RS13635 membrane protein low > 78
Paraburkholderia graminis OAS925 0.30 ABIE53_005485 cytochrome b561 0.32 ABIE53_000558 sodium/bile acid cotransporter 7 low > 113
Escherichia coli Nissle 1917 0.30 ECOLIN_RS06135 cytochrome b 0.33 ECOLIN_RS13845 bile acid:sodium symporter family protein — —
Escherichia fergusonii Becca 0.30 EFB2_02917 Cytochrome b561 0.33 EFB2_01467 hypothetical protein low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.29 OHPLBJKB_02608 Cytochrome b561 0.33 OHPLBJKB_01314 hypothetical protein low > 73
Escherichia coli ECRC98 0.29 JDDGAC_07415 yceJ Cytochrome b561-like protein 0.33 JDDGAC_26175 yfeH Putative symporter YfeH low > 86
Escherichia coli ECRC62 0.29 BNILDI_19445 yceJ Cytochrome b561-like protein 0.33 BNILDI_12770 yfeH Putative symporter YfeH low > 75
Escherichia coli ECRC102 0.29 NIAGMN_24075 yceJ Cytochrome b561-like protein 0.33 NIAGMN_19995 yfeH Putative symporter YfeH — —
Escherichia coli ECRC99 0.29 KEDOAH_24000 yceJ Cytochrome b561-like protein 0.33 KEDOAH_05995 yfeH Putative symporter YfeH — —
Escherichia coli ECRC100 0.29 OKFHMN_03755 yceJ Cytochrome b561-like protein 0.33 OKFHMN_22225 yfeH Putative symporter YfeH low > 80
Escherichia coli ECRC101 0.29 MCAODC_23115 yceJ Cytochrome b561-like protein 0.33 MCAODC_12755 yfeH Putative symporter YfeH low > 87
Escherichia coli BW25113 0.29 b1057 yceJ predicted cytochrome b561 (NCBI) 0.33 b2410 yfeH predicted inner membrane protein (NCBI) low > 76
Escherichia coli ECOR27 0.29 NOLOHH_21285 yceJ Cytochrome b561-like protein 0.33 NOLOHH_13905 yfeH Putative symporter YfeH low > 75
Escherichia coli BL21 0.29 ECD_01053 putative cytochrome b561 0.33 ECD_02309 putative inorganic ion transporter low > 61
Dechlorosoma suillum PS 0.29 Dsui_2355 cytochrome B561 0.44 Dsui_0418 putative Na+-dependent transporter low > 51
Pseudomonas putida KT2440 0.29 PP_4982 putative cytochrome b561, iron-regulated 0.30 PP_2877 putative osmotic pressure-regulated transporter low > 96
Escherichia coli ECOR38 0.29 HEPCGN_23735 yceJ Cytochrome b561-like protein 0.33 HEPCGN_21405 yfeH Putative symporter YfeH 0.47 64
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS05235 cytochrome b 0.30 LRK54_RS07065 bile acid:sodium symporter low > 59
Pseudomonas stutzeri RCH2 0.28 Psest_0307 Cytochrome B561 0.29 Psest_4207 Predicted Na+-dependent transporter low > 67
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_4460 Cytochrome b561 0.38 Pf1N1B4_1269 Sodium/bile acid symporter family low > 87
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_30170 cytochrome B 0.41 AO356_08085 bile acid:sodium symporter low > 104
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_1897 Cytochrome B561 0.40 Pf6N2E2_3491 Sodium/bile acid symporter family low > 103
Azospirillum sp. SherDot2 0.27 MPMX19_00292 Cytochrome b561 0.34 MPMX19_03934 hypothetical protein low > 112
Pseudomonas fluorescens SBW25 0.27 PFLU_RS15115 cytochrome b 0.31 PFLU_RS18220 bile acid:sodium symporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS15115 cytochrome b 0.31 PFLU_RS18220 bile acid:sodium symporter low > 109
Enterobacter sp. TBS_079 0.27 MPMX20_01737 Cytochrome b561 0.31 MPMX20_03303 hypothetical protein low > 85
Pectobacterium carotovorum WPP14 0.27 HER17_RS08580 cytochrome b 0.32 HER17_RS10785 bile acid:sodium symporter low > 75
Rhodanobacter sp. FW510-T8 0.26 OKGIIK_01590 cytochrome B 0.29 OKGIIK_16570 Bile acid:sodium symporter low > 52
Enterobacter asburiae PDN3 0.26 EX28DRAFT_1874 Cytochrome B561 0.31 EX28DRAFT_0219 Predicted Na+-dependent transporter low > 76
Castellaniella sp019104865 MT123 0.26 ABCV34_RS06055 cytochrome b 0.30 ABCV34_RS10910 bile acid:sodium symporter family protein low > 48
Pseudomonas simiae WCS417 0.26 PS417_26535 cytochrome B561 0.31 PS417_16190 bile acid:sodium symporter low > 88
Pseudomonas sp. RS175 0.25 PFR28_04206 Cytochrome b561 0.40 PFR28_05240 hypothetical protein low > 88
Dickeya dianthicola ME23 0.24 DZA65_RS13725 cytochrome b 0.33 DZA65_RS11100 bile acid:sodium symporter low > 75
Dickeya dianthicola 67-19 0.24 HGI48_RS13250 cytochrome b 0.33 HGI48_RS10620 bile acid:sodium symporter low > 71
Cupriavidus basilensis FW507-4G11 0.24 RR42_RS04290 cytochrome B561 0.43 RR42_RS03420 bile acid:sodium symporter low > 128
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.24 GFF3336 Cytochrome B561 0.33 GFF2039 Putative cytochrome oxidase low > 78
Rahnella sp. WP5 0.24 EX31_RS24345 cytochrome b 0.32 EX31_RS06855 bile acid:sodium symporter low > 89
Dickeya dadantii 3937 0.24 DDA3937_RS13185 cytochrome b 0.33 DDA3937_RS10620 bile acid:sodium symporter low > 74
Variovorax sp. SCN45 0.24 GFF6977 Cytochrome b561 0.33 GFF6063 Sodium/bile acid symporter family low > 127
Agrobacterium fabrum C58 0.23 Atu1483 cytochrome b561 0.31 Atu3888 hypothetical protein low > 89
Pantoea sp. MT58 0.23 IAI47_12240 cytochrome b 0.30 IAI47_05465 bile acid:sodium symporter low > 76
Dyella japonica UNC79MFTsu3.2 0.22 ABZR86_RS19080 cytochrome b 0.33 ABZR86_RS17040 bile acid:sodium symporter family protein low > 74
Pseudomonas syringae pv. syringae B728a 0.22 Psyr_0456 Cytochrome B561, bacterial 0.38 Psyr_0648 transporter, putative low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.22 Psyr_0456 Cytochrome B561, bacterial 0.38 Psyr_0648 transporter, putative low > 86
Serratia liquefaciens MT49 0.22 IAI46_09695 cytochrome b 0.31 IAI46_18420 bile acid:sodium symporter low > 86
Klebsiella michiganensis M5al 0.21 BWI76_RS13250 cytochrome b561 0.32 BWI76_RS20615 sodium symporter low > 92
Erwinia tracheiphila SCR3 0.21 LU632_RS10310 cytochrome b 0.29 LU632_RS06655 bile acid:sodium symporter 0.42 33
Sinorhizobium meliloti 1021 0.20 SMc01022 cytochrome B transmembrane protein 0.32 SMc04030 hypothetical protein low > 103

Not shown: 18 genomes with orthologs for AMB_RS18835 only; 7 genomes with orthologs for AMB_RS08405 only