Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Ralstonia sp. UNC404CL21Col | 1.0 | ABZR87_RS14025 | | LysR family transcriptional regulator ArgP | 1.0 | ABZR87_RS22920 | | phosphogluconate dehydratase | 0.32 | 9 |
Ralstonia solanacearum IBSBF1503 | 0.85 | RALBFv3_RS18360 | | transcriptional regulator ArgP | 0.94 | RALBFv3_RS16385 | | phosphogluconate dehydratase | low | > 76 |
Ralstonia solanacearum UW163 | 0.85 | UW163_RS20770 | | transcriptional regulator ArgP | 0.94 | UW163_RS17125 | | phosphogluconate dehydratase | — | — |
Ralstonia solanacearum PSI07 | 0.84 | RPSI07_RS03900 | | transcriptional regulator ArgP | 0.94 | RPSI07_RS07320 | | phosphogluconate dehydratase | low | > 81 |
Cupriavidus basilensis FW507-4G11 | 0.79 | RR42_RS31465 | | LysR family transcriptional regulator | 0.77 | RR42_RS37440 | | phosphogluconate dehydratase | low | > 128 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.76 | GFF5065 | | Chromosome initiation inhibitor | 0.60 | GFF5495 | | Phosphogluconate dehydratase (EC 4.2.1.12) | — | — |
Azospirillum sp. SherDot2 | 0.58 | MPMX19_01759 | | putative HTH-type transcriptional regulator | 0.60 | MPMX19_05118 | | Phosphogluconate dehydratase | — | — |
Variovorax sp. OAS795 | 0.56 | ABID97_RS23875 | | LysR family transcriptional regulator ArgP | 0.58 | ABID97_RS21300 | | phosphogluconate dehydratase | low | > 91 |
Agrobacterium fabrum C58 | 0.53 | Atu0928 | | transcriptional regulator, LysR family | 0.63 | Atu0598 | | phosphogluconate dehydratase | low | > 89 |
Variovorax sp. SCN45 | 0.53 | GFF2318 | | Transcriptional regulator ArgP, LysR family | 0.57 | GFF6513 | | Phosphogluconate dehydratase (EC 4.2.1.12) | low | > 127 |
Paraburkholderia graminis OAS925 | 0.47 | ABIE53_001719 | | LysR family transcriptional regulator (chromosome initiation inhibitor) | 0.61 | ABIE53_003517 | | phosphogluconate dehydratase | low | > 113 |
Paraburkholderia bryophila 376MFSha3.1 | 0.47 | H281DRAFT_04882 | | transcriptional regulator, LysR family | 0.61 | H281DRAFT_04278 | | 6-phosphogluconate dehydratase | — | — |
Paraburkholderia sabiae LMG 24235 | 0.47 | QEN71_RS23610 | | LysR family transcriptional regulator ArgP | 0.60 | QEN71_RS26920 | | phosphogluconate dehydratase | low | > 153 |
Phaeobacter inhibens DSM 17395 | 0.46 | PGA1_c21740 | | transcriptional regulator, ArgP family | 0.60 | PGA1_c28000 | | phosphogluconate dehydratase Edd | — | — |
Burkholderia phytofirmans PsJN | 0.46 | BPHYT_RS07440 | | LysR family transcriptional regulator | 0.61 | BPHYT_RS16735 | | phosphogluconate dehydratase | — | — |
Dinoroseobacter shibae DFL-12 | 0.45 | Dshi_0711 | | transcriptional regulator, LysR family (RefSeq) | 0.56 | Dshi_1769 | | 6-phosphogluconate dehydratase (RefSeq) | low | > 64 |
Acidovorax sp. GW101-3H11 | 0.44 | Ac3H11_3378 | | chromosome replication initiation inhibitor protein | 0.58 | Ac3H11_2082 | | Phosphogluconate dehydratase (EC 4.2.1.12) | — | — |
Xanthomonas campestris pv. campestris strain 8004 | 0.44 | Xcc-8004.1463.1 | | Transcriptional regulator lysR family | 0.57 | Xcc-8004.2447.1 | | Phosphogluconate dehydratase (EC 4.2.1.12) | low | > 74 |
Rhodanobacter sp. FW510-T8 | 0.44 | OKGIIK_01770 | | Transcriptional regulator ArgP | 0.58 | OKGIIK_14370 | edd | phosphogluconate dehydratase | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.43 | AO356_04995 | | LysR family transcriptional regulator | 0.62 | AO356_05220 | | phosphogluconate dehydratase | — | — |
Pseudomonas fluorescens GW456-L13 | 0.43 | PfGW456L13_1782 | | Chromosome initiation inhibitor | 0.61 | PfGW456L13_1889 | | Phosphogluconate dehydratase (EC 4.2.1.12) | low | > 87 |
Pseudomonas sp. RS175 | 0.43 | PFR28_00608 | | HTH-type transcriptional regulator ArgP | 0.62 | PFR28_00561 | | Phosphogluconate dehydratase | low | > 88 |
Pseudomonas fluorescens FW300-N2E2 | 0.43 | Pf6N2E2_2849 | | Chromosome initiation inhibitor | 0.62 | Pf6N2E2_2898 | | Phosphogluconate dehydratase (EC 4.2.1.12) | — | — |
Pseudomonas fluorescens FW300-N2E3 | 0.43 | AO353_03915 | | LysR family transcriptional regulator | 0.62 | AO353_03420 | | phosphogluconate dehydratase | low | > 101 |
Dyella japonica UNC79MFTsu3.2 | 0.42 | ABZR86_RS10990 | | LysR family transcriptional regulator ArgP | 0.58 | ABZR86_RS14690 | | phosphogluconate dehydratase | low | > 74 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.42 | Psyr_4057 | | regulatory protein, LysR:LysR, substrate-binding protein | 0.62 | Psyr_1109 | | 6-phosphogluconate dehydratase | low | > 86 |
Pseudomonas fluorescens FW300-N1B4 | 0.42 | Pf1N1B4_708 | | Chromosome initiation inhibitor | 0.61 | Pf1N1B4_601 | | Phosphogluconate dehydratase (EC 4.2.1.12) | — | — |
Pseudomonas syringae pv. syringae B728a | 0.42 | Psyr_4057 | | regulatory protein, LysR:LysR, substrate-binding protein | 0.62 | Psyr_1109 | | 6-phosphogluconate dehydratase | low | > 86 |
Pseudomonas fluorescens SBW25-INTG | 0.42 | PFLU_RS23790 | | LysR family transcriptional regulator ArgP | 0.63 | PFLU_RS24330 | | phosphogluconate dehydratase | low | > 109 |
Pseudomonas simiae WCS417 | 0.42 | PS417_22165 | | LysR family transcriptional regulator | 0.62 | PS417_22690 | | phosphogluconate dehydratase | low | > 88 |
Pseudomonas fluorescens SBW25 | 0.42 | PFLU_RS23790 | | LysR family transcriptional regulator ArgP | 0.63 | PFLU_RS24330 | | phosphogluconate dehydratase | low | > 109 |
Pseudomonas stutzeri RCH2 | 0.41 | Psest_1166 | | transcriptional regulator, ArgP family | 0.63 | Psest_1892 | | 6-phosphogluconate dehydratase | low | > 67 |
Pseudomonas sp. S08-1 | 0.41 | OH686_07195 | | Transcriptional regulator ArgP, LysR family | 0.62 | OH686_21145 | | phosphogluconate dehydratase | low | > 80 |
Pseudomonas putida KT2440 | 0.40 | PP_0917 | | Chromosome initiation inhibitor | 0.62 | PP_1010 | | phosphogluconate dehydratase | — | — |
Shewanella loihica PV-4 | 0.40 | Shew_1844 | | chromosome replication initiation inhibitor protein (RefSeq) | 0.61 | Shew_2046 | | phosphogluconate dehydratase (RefSeq) | — | — |
Shewanella amazonensis SB2B | 0.39 | Sama_2987 | | chromosome replication initiation inhibitor protein (RefSeq) | 0.59 | Sama_1810 | | phosphogluconate dehydratase (RefSeq) | — | — |
Shewanella sp. ANA-3 | 0.39 | Shewana3_1652 | | chromosome replication initiation inhibitor protein (RefSeq) | 0.61 | Shewana3_2149 | | phosphogluconate dehydratase (RefSeq) | low | > 73 |
Shewanella oneidensis MR-1 | 0.38 | SO2866 | iciA | chromosome initiation inhibitor (NCBI ptt file) | 0.61 | SO2487 | edd | 6-phosphogluconate dehydratase (NCBI ptt file) | low | > 76 |
Marinobacter adhaerens HP15 | 0.36 | HP15_868 | | transcriptional regulator, LysR family | 0.59 | HP15_2174 | | 6-phosphogluconate dehydratase | low | > 73 |
Vibrio cholerae E7946 ATCC 55056 | 0.34 | CSW01_02560 | | chromosome initiation inhibitor | 0.50 | CSW01_01480 | | phosphogluconate dehydratase | low | > 62 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.31 | GFF3015 | | Chromosome initiation inhibitor | 0.61 | GFF1630 | | Phosphogluconate dehydratase (EC 4.2.1.12) | low | > 78 |
Enterobacter sp. TBS_079 | 0.30 | MPMX20_03773 | | HTH-type transcriptional regulator ArgP | 0.60 | MPMX20_02756 | | Phosphogluconate dehydratase | low | > 85 |
Serratia liquefaciens MT49 | 0.30 | IAI46_20910 | | LysR family transcriptional regulator ArgP | 0.61 | IAI46_23175 | | phosphogluconate dehydratase | low | > 86 |
Enterobacter asburiae PDN3 | 0.30 | EX28DRAFT_2967 | | transcriptional regulator, ArgP family | 0.61 | EX28DRAFT_0705 | | 6-phosphogluconate dehydratase (EC 4.2.1.12) | low | > 76 |
Rahnella sp. WP5 | 0.30 | EX31_RS21460 | | LysR family transcriptional regulator ArgP | 0.62 | EX31_RS16630 | | phosphogluconate dehydratase | low | > 89 |
Escherichia coli ECOR27 | 0.30 | NOLOHH_11355 | argP | DNA-binding transcriptional regulator ArgP | 0.61 | NOLOHH_16850 | edd | phosphogluconate dehydratase | low | > 75 |
Escherichia coli ECRC101 | 0.30 | MCAODC_09970 | argP | DNA-binding transcriptional regulator ArgP | 0.61 | MCAODC_19065 | edd | phosphogluconate dehydratase | low | > 87 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.30 | OHPLBJKB_00800 | | HTH-type transcriptional regulator ArgP | 0.61 | OHPLBJKB_01878 | | Phosphogluconate dehydratase | low | > 73 |
Escherichia coli ECRC98 | 0.30 | JDDGAC_23090 | argP | DNA-binding transcriptional regulator ArgP | 0.61 | JDDGAC_00915 | edd | phosphogluconate dehydratase | low | > 86 |
Escherichia fergusonii Becca | 0.30 | EFB2_00987 | | HTH-type transcriptional regulator ArgP | 0.61 | EFB2_02092 | | Phosphogluconate dehydratase | low | > 86 |
Escherichia coli BL21 | 0.30 | ECD_02747 | | transcriptional regulator for arginine transport and DNA replication genes; replication initiation inhibitor | 0.61 | ECD_01822 | | 6-phosphogluconate dehydratase | low | > 61 |
Klebsiella michiganensis M5al | 0.30 | BWI76_RS23930 | | transcriptional regulator ArgP | 0.60 | BWI76_RS18100 | | phosphogluconate dehydratase | low | > 92 |
Escherichia coli ECRC102 | 0.30 | NIAGMN_17215 | argP | DNA-binding transcriptional regulator ArgP | 0.61 | NIAGMN_01720 | edd | phosphogluconate dehydratase | — | — |
Escherichia coli Nissle 1917 | 0.30 | ECOLIN_RS16225 | | DNA-binding transcriptional regulator ArgP | 0.61 | ECOLIN_RS10310 | | phosphogluconate dehydratase | — | — |
Escherichia coli ECOR38 | 0.30 | HEPCGN_18750 | argP | DNA-binding transcriptional regulator ArgP | 0.61 | HEPCGN_04745 | edd | phosphogluconate dehydratase | low | > 87 |
Escherichia coli ECRC62 | 0.30 | BNILDI_09890 | argP | DNA-binding transcriptional regulator ArgP | 0.61 | BNILDI_15645 | edd | phosphogluconate dehydratase | low | > 75 |
Escherichia coli ECRC99 | 0.30 | KEDOAH_08690 | argP | DNA-binding transcriptional regulator ArgP | 0.61 | KEDOAH_01765 | edd | phosphogluconate dehydratase | — | — |
Escherichia coli ECRC100 | 0.30 | OKFHMN_19450 | argP | DNA-binding transcriptional regulator ArgP | 0.61 | OKFHMN_26340 | edd | phosphogluconate dehydratase | low | > 80 |
Escherichia coli BW25113 | 0.30 | b2916 | argP | chromosome replication initiation inhibitor protein (NCBI) | 0.61 | b1851 | edd | phosphogluconate dehydratase (NCBI) | 0.24 | 10 |
Alteromonas macleodii MIT1002 | 0.30 | MIT1002_00129 | | OriC replication inhibitor | 0.62 | MIT1002_02405 | | Phosphogluconate dehydratase | low | > 70 |
Not shown: 11 genomes with orthologs for ABZR87_RS14025 only; 11 genomes with orthologs for ABZR87_RS22920 only