| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Ralstonia sp. UNC404CL21Col | 1.0 | ABZR87_RS01840 | | HlyC/CorC family transporter | 1.0 | ABZR87_RS13315 | | RluA family pseudouridine synthase | 0.68 | 7 |
| Ralstonia solanacearum IBSBF1503 | 0.90 | RALBFv3_RS06175 | | HlyC/CorC family transporter | 0.88 | RALBFv3_RS01520 | | RluA family pseudouridine synthase | low | > 76 |
| Ralstonia solanacearum UW163 | 0.90 | UW163_RS07450 | | HlyC/CorC family transporter | 0.88 | UW163_RS14830 | | RluA family pseudouridine synthase | — | — |
| Ralstonia solanacearum GMI1000 | 0.90 | RS_RS14125 | | HlyC/CorC family transporter | 0.89 | RS_RS08205 | | RluA family pseudouridine synthase | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.89 | RPSI07_RS11065 | | HlyC/CorC family transporter | 0.91 | RPSI07_RS15970 | | RluA family pseudouridine synthase | low | > 81 |
| Burkholderia phytofirmans PsJN | 0.64 | BPHYT_RS17140 | | magnesium and cobalt efflux protein CorC | 0.53 | BPHYT_RS09135 | | ribosomal large subunit pseudouridine synthase D | low | > 109 |
| Paraburkholderia graminis OAS925 | 0.64 | ABIE53_003593 | | Mg2+/Co2+ transporter CorB | 0.53 | ABIE53_002062 | | 23S rRNA pseudouridine1911/1915/1917 synthase | low | > 113 |
| Paraburkholderia sabiae LMG 24235 | 0.64 | QEN71_RS27300 | | HlyC/CorC family transporter | 0.54 | QEN71_RS22215 | | RluA family pseudouridine synthase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.59 | H281DRAFT_06258 | | Mg2+ and Co2+ transporter CorB, contains DUF21, CBS pair, and CorC-HlyC domains | 0.53 | H281DRAFT_00848 | | ribosomal large subunit pseudouridine synthase D (EC 5.4.99.-) | low | > 103 |
| Herbaspirillum seropedicae SmR1 | 0.57 | HSERO_RS01775 | | hypothetical protein | 0.44 | HSERO_RS15070 | | ribosomal large subunit pseudouridine synthase D | low | > 78 |
| Marinobacter adhaerens HP15 | 0.42 | HP15_755 | | Mg2+ and Co2+ transporter CorB | 0.40 | HP15_527 | | pseudouridine synthase, RluA family | low | > 73 |
| Pseudomonas stutzeri RCH2 | 0.39 | Psest_3136 | | Putative Mg2+ and Co2+ transporter CorB | 0.39 | Psest_0709 | | pseudouridine synthase, RluA family | 0.26 | 44 |
| Vibrio cholerae E7946 ATCC 55056 | 0.39 | CSW01_02980 | | HlyC/CorC family transporter | 0.34 | CSW01_03695 | | ribosomal large subunit pseudouridine synthase D | 0.79 | 17 |
| Shewanella loihica PV-4 | 0.39 | Shew_1060 | | hypothetical protein (RefSeq) | 0.37 | Shew_2950 | | RluA family pseudouridine synthase (RefSeq) | low | > 60 |
| Kangiella aquimarina DSM 16071 | 0.38 | B158DRAFT_2258 | | Putative Mg2+ and Co2+ transporter CorB | 0.36 | B158DRAFT_2532 | | Pseudouridylate synthases, 23S RNA-specific | low | > 40 |
| Shewanella sp. ANA-3 | 0.38 | Shewana3_3020 | | hypothetical protein (RefSeq) | 0.37 | Shewana3_3171 | | ribosomal large subunit pseudouridine synthase D (RefSeq) | low | > 73 |
| Shewanella amazonensis SB2B | 0.38 | Sama_0886 | | hypothetical protein (RefSeq) | 0.37 | Sama_2605 | | pseudouridylate synthase (RefSeq) | — | — |
| Alteromonas macleodii MIT1002 | 0.38 | MIT1002_01294 | | Hemolysin C | 0.36 | MIT1002_02679 | | Ribosomal large subunit pseudouridine synthase D | low | > 70 |
| Escherichia coli ECOR27 | 0.37 | NOLOHH_12835 | yfjD | UPF0053 inner membrane protein YfjD | 0.36 | NOLOHH_12925 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 75 |
| Escherichia coli ECRC62 | 0.37 | BNILDI_11640 | yfjD | UPF0053 inner membrane protein YfjD | 0.36 | BNILDI_11730 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 75 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.37 | OHPLBJKB_01094 | | hypothetical protein | 0.36 | OHPLBJKB_01112 | | Ribosomal large subunit pseudouridine synthase D | low | > 73 |
| Escherichia coli ECOR38 | 0.37 | HEPCGN_20280 | yfjD | UPF0053 inner membrane protein YfjD | 0.36 | HEPCGN_20375 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 87 |
| Escherichia fergusonii Becca | 0.37 | EFB2_01280 | | hypothetical protein | 0.36 | EFB2_01296 | | Ribosomal large subunit pseudouridine synthase D | low | > 86 |
| Escherichia coli ECRC98 | 0.36 | JDDGAC_24825 | yfjD | UPF0053 inner membrane protein YfjD | 0.36 | JDDGAC_24915 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 86 |
| Escherichia coli ECRC99 | 0.36 | KEDOAH_07060 | yfjD | UPF0053 inner membrane protein YfjD | 0.36 | KEDOAH_06970 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | — | — |
| Escherichia coli ECRC100 | 0.36 | OKFHMN_21160 | yfjD | UPF0053 inner membrane protein YfjD | 0.36 | OKFHMN_21250 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 80 |
| Enterobacter sp. TBS_079 | 0.36 | MPMX20_03482 | | hypothetical protein | 0.35 | MPMX20_03463 | | Ribosomal large subunit pseudouridine synthase D | low | > 85 |
| Escherichia coli Nissle 1917 | 0.36 | ECOLIN_RS14760 | | HlyC/CorC family transporter | 0.36 | ECOLIN_RS14675 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 55 |
| Escherichia coli BW25113 | 0.36 | b4461 | yfjD | predicted inner membrane protein (RefSeq) | 0.36 | b2594 | rluD | 23S rRNA pseudouridine synthase (NCBI) | — | — |
| Enterobacter asburiae PDN3 | 0.36 | EX28DRAFT_2715 | | Putative Mg2+ and Co2+ transporter CorB | 0.35 | EX28DRAFT_2695 | | pseudouridine synthase, RluA family | low | > 76 |
| Escherichia coli ECRC102 | 0.36 | NIAGMN_18930 | yfjD | UPF0053 inner membrane protein YfjD | 0.36 | NIAGMN_19020 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | — | — |
| Pantoea sp. MT58 | 0.36 | IAI47_04360 | | HlyC/CorC family transporter | 0.35 | IAI47_04425 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 76 |
| Rahnella sp. WP5 | 0.36 | EX31_RS07740 | | HlyC/CorC family transporter | 0.36 | EX31_RS07570 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 89 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.35 | GFF4166 | | Hemolysins and related proteins containing CBS domains | 0.36 | GFF4182 | | Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) | low | > 78 |
| Erwinia tracheiphila SCR3 | 0.35 | LU632_RS15680 | | HlyC/CorC family transporter | 0.37 | LU632_RS16945 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 74 |
| Klebsiella michiganensis M5al | 0.35 | BWI76_RS21540 | | membrane protein | 0.35 | BWI76_RS21450 | | 23S rRNA pseudouridine(1911/1915/1917) synthase | low | > 92 |
| Escherichia coli BL21 | 0.35 | ECD_02501 | | UPF0053 family inner membrane protein | 0.36 | ECD_02484 | | 23S rRNA pseudouridine(1911,1915,1917) synthase | low | > 61 |
| Serratia liquefaciens MT49 | 0.34 | IAI46_03905 | | HlyC/CorC family transporter | 0.36 | IAI46_03985 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | 0.48 | 32 |
| Dinoroseobacter shibae DFL-12 | 0.25 | Dshi_1613 | | protein of unknown function DUF21 (RefSeq) | 0.26 | Dshi_2610 | | pseudouridine synthase, RluA family (RefSeq) | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.24 | PfGW456L13_1713 | | Magnesium and cobalt efflux protein CorC | 0.38 | PfGW456L13_1493 | | Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.24 | Pf1N1B4_876 | | Magnesium and cobalt efflux protein CorC | 0.38 | Pf1N1B4_2822 | | Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.24 | Psyr_1279 | | CBS:Transporter-associated region | 0.39 | Psyr_0726 | | ribosomal large subunit pseudouridine synthase D | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.24 | Psyr_1279 | | CBS:Transporter-associated region | 0.39 | Psyr_0726 | | ribosomal large subunit pseudouridine synthase D | low | > 86 |
| Pseudomonas simiae WCS417 | 0.24 | PS417_22935 | | hypothetical protein | 0.38 | PS417_03820 | | ribosomal large subunit pseudouridine synthase D | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.23 | Pf6N2E2_3152 | | Magnesium and cobalt efflux protein CorC | 0.38 | Pf6N2E2_5127 | | Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.23 | AO356_06420 | | transporter | 0.39 | AO356_15925 | | ribosomal large subunit pseudouridine synthase D | low | > 104 |
| Sinorhizobium meliloti 1021 | 0.23 | SMc00697 | | hypothetical protein | 0.28 | SMc00647 | | ribosomal large subunit pseudouridine synthase | low | > 103 |
| Magnetospirillum magneticum AMB-1 | 0.23 | AMB_RS19860 | | HlyC/CorC family transporter | 0.30 | AMB_RS16095 | | RluA family pseudouridine synthase | low | > 64 |
| Pseudomonas fluorescens FW300-N2E3 | 0.23 | AO353_04400 | | transporter | 0.39 | AO353_14220 | | ribosomal large subunit pseudouridine synthase D | low | > 101 |
| Pseudomonas fluorescens SBW25 | 0.22 | PFLU_RS24595 | | DUF21 domain-containing protein | 0.38 | PFLU_RS03870 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.22 | PFLU_RS24595 | | DUF21 domain-containing protein | 0.38 | PFLU_RS03870 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 109 |
| Pseudomonas sp. RS175 | 0.22 | PFR28_00324 | | hypothetical protein | 0.39 | PFR28_03748 | | Ribosomal large subunit pseudouridine synthase D | low | > 88 |
| Phaeobacter inhibens DSM 17395 | 0.22 | PGA1_c14050 | | inner membrane protein | 0.27 | PGA1_c09000 | | ribosomal large subunit pseudouridine synthase D | — | — |
| Pseudomonas putida KT2440 | 0.22 | PP_1459 | | CBS domain protein | 0.40 | PP_0623 | | 23S rRNA pseudouridine(1911,1915,1917) synthase | — | — |
| Rhizobium sp. OAE497 | 0.21 | ABIE40_RS17665 | | HlyC/CorC family transporter | 0.28 | ABIE40_RS14790 | | RluA family pseudouridine synthase | low | > 107 |
| Caulobacter crescentus NA1000 Δfur | 0.20 | CCNA_03112 | | magnesium and cobalt efflux protein corB | 0.27 | CCNA_00485 | | ribosomal large subunit pseudouridine synthase D | low | > 67 |
| Caulobacter crescentus NA1000 | 0.20 | CCNA_03112 | | magnesium and cobalt efflux protein corB | 0.27 | CCNA_00485 | | ribosomal large subunit pseudouridine synthase D | low | > 66 |
| Fusobacterium nucleatum SB010 | 0.19 | HUW76_09050 | | HlyC/CorC family transporter | 0.28 | HUW76_08575 | | RluA family pseudouridine synthase | low | > 35 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.19 | ABZR88_RS17090 | | hemolysin family protein | 0.29 | ABZR88_RS03985 | | RluA family pseudouridine synthase | low | > 71 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.14 | Echvi_1246 | | gliding motility-associated protein GldE | 0.35 | Echvi_0642 | | pseudouridine synthase, RluA family | low | > 79 |
Not shown: 2 genomes with orthologs for ABZR87_RS01840 only; 36 genomes with orthologs for ABZR87_RS13315 only