Conservation of cofitness between ABZR87_RS05700 and ABZR87_RS10245 in Ralstonia sp. UNC404CL21Col

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia sp. UNC404CL21Col 1.0 ABZR87_RS05700 tRNA 2-thiocytidine(32) synthetase TtcA 1.0 ABZR87_RS10245 excinuclease ABC subunit UvrC 0.42 20
Ralstonia solanacearum IBSBF1503 0.93 RALBFv3_RS10245 tRNA 2-thiocytidine(32) synthetase TtcA 0.89 RALBFv3_RS14525 excinuclease ABC subunit UvrC low > 76
Ralstonia solanacearum UW163 0.93 UW163_RS03335 tRNA 2-thiocytidine(32) synthetase TtcA 0.89 UW163_RS11990 excinuclease ABC subunit UvrC — —
Ralstonia solanacearum PSI07 0.93 RPSI07_RS23130 tRNA 2-thiocytidine(32) synthetase TtcA 0.89 RPSI07_RS18935 excinuclease ABC subunit UvrC low > 81
Ralstonia solanacearum GMI1000 0.93 RS_RS00865 tRNA 2-thiocytidine(32) synthetase TtcA 0.88 RS_RS05305 excinuclease ABC subunit UvrC low > 80
Cupriavidus basilensis FW507-4G11 0.81 RR42_RS01445 tRNA 2-thiocytidine biosynthesis protein TtcA 0.78 RR42_RS14000 excinuclease ABC subunit C low > 128
Dechlorosoma suillum PS 0.63 Dsui_0695 putative ATPase of the PP-loop superfamily implicated in cell cycle control 0.47 Dsui_2470 excinuclease ABC, C subunit low > 51
Kangiella aquimarina DSM 16071 0.62 B158DRAFT_2154 tRNA s(2)C-32 sulfurtransferase (EC 2.8.1.4) 0.37 B158DRAFT_1273 Excinuclease ABC subunit C low > 40
Alteromonas macleodii MIT1002 0.61 MIT1002_02139 tRNA 2-thiocytidine biosynthesis protein TtcA 0.39 MIT1002_02153 Excinuclease ABC subunit C low > 70
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_02337 tRNA-cytidine(32) 2-sulfurtransferase 0.41 OHPLBJKB_01816 UvrABC system protein C low > 73
Escherichia coli ECRC99 0.61 KEDOAH_26600 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.41 KEDOAH_02265 uvrC excinuclease ABC subunit UvrC — —
Escherichia coli ECRC62 0.61 BNILDI_18020 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.41 BNILDI_15235 uvrC excinuclease ABC subunit UvrC low > 75
Escherichia coli ECOR38 0.61 HEPCGN_26005 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.41 HEPCGN_04180 uvrC excinuclease ABC subunit UvrC low > 87
Escherichia coli ECRC101 0.61 MCAODC_16100 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.41 MCAODC_19565 uvrC excinuclease ABC subunit UvrC low > 87
Escherichia coli BW25113 0.61 b1344 ydaO predicted C32 tRNA thiolase (NCBI) 0.41 b1913 uvrC excinuclease ABC, subunit C; repair of UV damage to DNA (VIMSS) low > 76
Escherichia coli BL21 0.61 ECD_01321 tRNA s(2)C32 thioltransferase, iron sulfur cluster protein 0.41 ECD_01878 excinuclease UvrABC, endonuclease subunit low > 61
Escherichia coli ECRC102 0.61 NIAGMN_26325 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.41 NIAGMN_02225 uvrC excinuclease ABC subunit UvrC — —
Escherichia coli ECRC98 0.61 JDDGAC_04715 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.41 JDDGAC_00415 uvrC excinuclease ABC subunit UvrC low > 86
Escherichia coli ECOR27 0.61 NOLOHH_19870 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.41 NOLOHH_16445 uvrC excinuclease ABC subunit UvrC low > 75
Escherichia coli ECRC100 0.61 OKFHMN_02155 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.41 OKFHMN_25825 uvrC excinuclease ABC subunit UvrC — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF2648 tRNA(Cytosine32)-2-thiocytidine synthetase 0.41 GFF1700 Excinuclease ABC subunit C low > 78
Escherichia coli Nissle 1917 0.60 ECOLIN_RS08065 tRNA 2-thiocytidine(32) synthetase TtcA 0.41 ECOLIN_RS10895 excinuclease ABC subunit UvrC — —
Vibrio cholerae E7946 ATCC 55056 0.60 CSW01_07180 tRNA 2-thiocytidine(32) synthetase TtcA 0.38 CSW01_06140 excinuclease ABC subunit C low > 62
Klebsiella michiganensis M5al 0.60 BWI76_RS12710 tRNA 2-thiocytidine(32) synthetase TtcA 0.41 BWI76_RS18330 excinuclease ABC subunit C low > 92
Dickeya dianthicola ME23 0.60 DZA65_RS12850 tRNA 2-thiocytidine(32) synthetase TtcA 0.39 DZA65_RS14285 excinuclease ABC subunit UvrC low > 75
Escherichia fergusonii Becca 0.60 EFB2_02583 tRNA-cytidine(32) 2-sulfurtransferase 0.41 EFB2_02033 UvrABC system protein C low > 86
Dickeya dianthicola 67-19 0.60 HGI48_RS12410 tRNA 2-thiocytidine(32) synthetase TtcA 0.39 HGI48_RS13795 excinuclease ABC subunit UvrC 0.42 67
Enterobacter asburiae PDN3 0.60 EX28DRAFT_1007 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 0.40 EX28DRAFT_0634 Excinuclease ABC subunit C 0.44 28
Pantoea sp. MT58 0.60 IAI47_09475 tRNA 2-thiocytidine(32) synthetase TtcA 0.40 IAI47_12465 excinuclease ABC subunit UvrC low > 76
Enterobacter sp. TBS_079 0.60 MPMX20_02440 tRNA-cytidine(32) 2-sulfurtransferase 0.40 MPMX20_02838 UvrABC system protein C low > 85
Pseudomonas fluorescens FW300-N1B4 0.60 Pf1N1B4_3491 tRNA(Cytosine32)-2-thiocytidine synthetase 0.40 Pf1N1B4_5618 Excinuclease ABC subunit C 0.21 44
Dickeya dadantii 3937 0.60 DDA3937_RS12330 tRNA 2-thiocytidine(32) synthetase TtcA 0.39 DDA3937_RS13700 excinuclease ABC subunit UvrC low > 74
Pectobacterium carotovorum WPP14 0.59 HER17_RS09605 tRNA 2-thiocytidine(32) synthetase TtcA 0.38 HER17_RS07715 excinuclease ABC subunit UvrC low > 75
Pseudomonas fluorescens GW456-L13 0.59 PfGW456L13_2020 tRNA(Cytosine32)-2-thiocytidine synthetase 0.40 PfGW456L13_2886 Excinuclease ABC subunit C low > 87
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_02780 tRNA 2-thiocytidine biosynthesis protein TtcA 0.40 AO353_21835 excinuclease ABC subunit C 0.53 5
Pseudomonas simiae WCS417 0.59 PS417_16415 tRNA 2-thiocytidine biosynthesis protein TtcA 0.40 PS417_10725 excinuclease ABC subunit C low > 88
Pseudomonas fluorescens SBW25 0.59 PFLU_RS18455 tRNA 2-thiocytidine(32) synthetase TtcA 0.41 PFLU_RS10770 excinuclease ABC subunit UvrC low > 109
Serratia liquefaciens MT49 0.59 IAI46_13420 tRNA 2-thiocytidine(32) synthetase TtcA 0.40 IAI46_09210 excinuclease ABC subunit UvrC low > 86
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS18455 tRNA 2-thiocytidine(32) synthetase TtcA 0.41 PFLU_RS10770 excinuclease ABC subunit UvrC low > 109
Rahnella sp. WP5 0.59 EX31_RS06375 tRNA 2-thiocytidine(32) synthetase TtcA 0.39 EX31_RS24150 excinuclease ABC subunit UvrC low > 89
Pseudomonas sp. RS175 0.59 PFR28_03236 tRNA-cytidine(32) 2-sulfurtransferase 0.39 PFR28_01411 UvrABC system protein C low > 88
Pseudomonas stutzeri RCH2 0.59 Psest_3033 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 0.42 Psest_2259 excinuclease ABC, C subunit low > 67
Pseudomonas fluorescens FW300-N2C3 0.59 AO356_19000 tRNA 2-thiocytidine biosynthesis protein TtcA 0.40 AO356_00350 excinuclease ABC subunit C 0.47 1
Variovorax sp. OAS795 0.59 ABID97_RS06505 tRNA 2-thiocytidine(32) synthetase TtcA 0.60 ABID97_RS10635 excinuclease ABC subunit UvrC low > 91
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_3705 conserved hypothetical protein 0.41 Psyr_2896 Excinuclease ABC subunit C low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_3705 conserved hypothetical protein 0.41 Psyr_2896 Excinuclease ABC subunit C low > 86
Pseudomonas sp. S08-1 0.58 OH686_05145 tRNA-(cytosine32)-2-thiocytidine synthetase TtcA 0.40 OH686_00340 excinuclease ABC subunit C low > 80
Acidovorax sp. GW101-3H11 0.58 Ac3H11_1817 tRNA(Cytosine32)-2-thiocytidine synthetase 0.59 Ac3H11_373 Excinuclease ABC subunit C low > 79
Pseudomonas putida KT2440 0.58 PP_1641 tRNA 2-thiocytidine biosynthesis protein TtcA 0.42 PP_4098 UvrABC system protein C low > 96
Pseudomonas fluorescens FW300-N2E2 0.58 Pf6N2E2_5711 tRNA(Cytosine32)-2-thiocytidine synthetase 0.39 Pf6N2E2_2021 Excinuclease ABC subunit C low > 103
Variovorax sp. SCN45 0.58 GFF7310 tRNA-(cytosine32)-2-thiocytidine synthetase TtcA 0.60 GFF2859 Excinuclease ABC subunit C low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.56 GFF1658 tRNA(Cytosine32)-2-thiocytidine synthetase 0.59 GFF3847 Excinuclease ABC subunit C — —
Shewanella oneidensis MR-1 0.56 SO2354 conserved hypothetical protein (NCBI ptt file) 0.38 SO1861 uvrC excinuclease ABC, C subunit (NCBI ptt file) low > 76
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS18570 tRNA 2-thiocytidine biosynthesis protein TtcA 0.36 BPHYT_RS14320 UvrABC system protein C low > 109
Erwinia tracheiphila SCR3 0.55 LU632_RS12165 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.40 LU632_RS10195 uvrC excinuclease ABC subunit UvrC low > 74
Castellaniella sp019104865 MT123 0.55 ABCV34_RS10450 tRNA 2-thiocytidine(32) synthetase TtcA 0.56 ABCV34_RS06980 excinuclease ABC subunit UvrC low > 48
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS28595 tRNA 2-thiocytidine(32) synthetase TtcA 0.69 QEN71_RS04665 excinuclease ABC subunit UvrC low > 153
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS22035 tRNA 2-thiocytidine biosynthesis protein TtcA 0.68 HSERO_RS09690 excinuclease ABC subunit C low > 78
Paraburkholderia graminis OAS925 0.55 ABIE53_000036 tRNA 2-thiocytidine biosynthesis protein TtcA 0.68 ABIE53_003025 excinuclease ABC subunit C low > 113
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_13200 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.41 OKGIIK_06930 uvrC excinuclease ABC subunit UvrC low > 52
Acinetobacter radioresistens SK82 0.51 MPMX26_00810 tRNA-cytidine(32) 2-sulfurtransferase 0.37 MPMX26_00228 UvrABC system protein C low > 36
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.5211.1 tRNA(Cytosine32)-2-thiocytidine synthetase 0.40 Xcc-8004.2477.1 Excinuclease ABC subunit C low > 74
Sinorhizobium meliloti 1021 0.45 SMc00534 C32 tRNA thiolase 0.33 SMc00602 excinuclease ABC subunit C low > 103
Phaeobacter inhibens DSM 17395 0.44 PGA1_c02110 tRNA 2-thiocytidine biosynthesis protein TtcA 0.32 PGA1_c02880 uvrABC system protein C low > 62
Dinoroseobacter shibae DFL-12 0.43 Dshi_0330 PP-loop domain protein (RefSeq) 0.34 Dshi_0644 excinuclease ABC, C subunit (RefSeq) low > 64
Rhizobium sp. OAE497 0.43 ABIE40_RS10230 tRNA 2-thiocytidine(32) synthetase TtcA 0.32 ABIE40_RS06500 excinuclease ABC subunit UvrC — —
Agrobacterium fabrum C58 0.43 Atu1858 hypothetical protein 0.33 Atu1129 excinuclease ABC chain C low > 89

Not shown: 1 genomes with orthologs for ABZR87_RS05700 only; 33 genomes with orthologs for ABZR87_RS10245 only