Conservation of cofitness between Sama_0764 and Sama_0779 in Shewanella amazonensis SB2B

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_0764 cobinamide kinase/cobinamide phosphate guanylyltransferase (RefSeq) 1.0 Sama_0779 glutamyl-tRNA synthetase domain-containing protein (RefSeq) 0.26 20
Shewanella sp. ANA-3 0.50 Shewana3_3276 adenosylcobinamide kinase (RefSeq) 0.71 Shewana3_3405 glutamyl-tRNA synthetase, class Ic (RefSeq) low > 73
Shewanella oneidensis MR-1 0.50 SO1037 cobU cobinamide kinase/cobinamide phosphate guanylyltransferase (NCBI ptt file) 0.70 SO0873 glutamyl-tRNA synthetase domain protein (NCBI ptt file) low > 76
Pseudomonas stutzeri RCH2 0.49 Psest_3007 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase 0.38 Psest_1002 glutamyl-queuosine tRNA(Asp) synthetase low > 67
Pseudomonas fluorescens FW300-N2E3 0.48 AO353_02610 adenosylcobinamide kinase 0.40 AO353_14415 glutamyl-Q tRNA(Asp) ligase low > 101
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.1397.1 Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) 0.43 Xcc-8004.2261.1 glutamyl-Q-tRNA synthetase low > 74
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_3712 Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) 0.40 Pf1N1B4_2861 glutamyl-Q-tRNA synthetase low > 87
Pseudomonas sp. S08-1 0.46 OH686_04960 Adenosylcobinamide kinase / Adenosylcobinamide-phosphate guanylyltransferase 0.43 OH686_17275 glutamyl-queuosine tRNA(Asp) synthetase low > 80
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_5743 Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) 0.41 Pf6N2E2_5159 glutamyl-Q-tRNA synthetase low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_3675 adenosylcobinamide kinase 0.39 Psyr_0834 Glutamyl-tRNA synthetase, class Ic low > 86
Pseudomonas fluorescens SBW25 0.45 PFLU_RS22000 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 0.40 PFLU_RS25720 tRNA glutamyl-Q(34) synthetase GluQRS low > 109
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS10895 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 0.40 ABZR86_RS00575 tRNA glutamyl-Q(34) synthetase GluQRS low > 74
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_4237 Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) 0.40 PfGW456L13_1527 glutamyl-Q-tRNA synthetase low > 87
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_19165 adenosylcobinamide kinase 0.40 AO356_16090 glutamyl-Q tRNA(Asp) ligase low > 104
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS22000 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 0.40 PFLU_RS25720 tRNA glutamyl-Q(34) synthetase GluQRS low > 109
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_3675 adenosylcobinamide kinase 0.39 Psyr_0834 Glutamyl-tRNA synthetase, class Ic low > 86
Pseudomonas putida KT2440 0.45 PP_1678 bifunctional cobinamide-P guanylyltransferase - adenosylcobinamide kinase 0.42 PP_4694 Glutamyl-Q tRNA(Asp) synthetase low > 96
Lysobacter sp. OAE881 0.44 ABIE51_RS04970 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 0.42 ABIE51_RS13520 tRNA glutamyl-Q(34) synthetase GluQRS low > 62
Pseudomonas sp. RS175 0.44 PFR28_03203 Bifunctional adenosylcobalamin biosynthesis protein CobP 0.40 PFR28_03715 Glutamyl-Q tRNA(Asp) synthetase low > 88
Pseudomonas simiae WCS417 0.44 PS417_20035 adenosylcobinamide kinase 0.41 PS417_23880 glutamyl-Q tRNA(Asp) ligase low > 88
Vibrio cholerae E7946 ATCC 55056 0.44 CSW01_06270 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 0.50 CSW01_03150 tRNA glutamyl-Q(34) synthetase GluQRS low > 62
Acinetobacter radioresistens SK82 0.44 MPMX26_01613 Bifunctional adenosylcobalamin biosynthesis protein CobP 0.36 MPMX26_00176 Glutamyl-Q tRNA(Asp) synthetase — —
Shewanella loihica PV-4 0.42 Shew_0716 cobalbumin biosynthesis enzyme (RefSeq) 0.65 Shew_3130 glutamate--tRNA ligase (RefSeq) low > 60
Rhodanobacter sp. FW510-T8 0.41 OKGIIK_05505 cobU bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 0.41 OKGIIK_03640 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS low > 52
Variovorax sp. SCN45 0.39 GFF448 Adenosylcobinamide kinase (EC 2.7.1.156) / Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) 0.29 GFF592 Glutamyl-Q tRNA(Asp) synthetase low > 127
Paraburkholderia sabiae LMG 24235 0.38 QEN71_RS25100 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 0.35 QEN71_RS24480 tRNA glutamyl-Q(34) synthetase GluQRS low > 153
Variovorax sp. OAS795 0.37 ABID97_RS17415 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 0.28 ABID97_RS18025 tRNA glutamyl-Q(34) synthetase GluQRS — —
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS13245 adenosylcobinamide kinase 0.35 HSERO_RS17850 glutamyl-Q tRNA(Asp) ligase — —
Ralstonia solanacearum IBSBF1503 0.37 RALBFv3_RS04450 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 0.32 RALBFv3_RS03645 tRNA glutamyl-Q(34) synthetase GluQRS low > 76
Ralstonia solanacearum UW163 0.37 UW163_RS09220 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 0.32 UW163_RS10025 tRNA glutamyl-Q(34) synthetase GluQRS — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.37 GFF3979 Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) 0.36 GFF5183 glutamyl-Q-tRNA synthetase — —
Dechlorosoma suillum PS 0.37 Dsui_0473 adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase 0.41 Dsui_1040 glutamyl-queuosine tRNA(Asp) synthetase low > 51
Burkholderia phytofirmans PsJN 0.37 BPHYT_RS04895 adenosylcobinamide kinase 0.37 BPHYT_RS06160 glutamyl-Q tRNA(Asp) ligase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_00145 adenosylcobinamide kinase /adenosylcobinamide-phosphate guanylyltransferase 0.35 H281DRAFT_00309 glutamyl-Q tRNA(Asp) synthetase 0.45 34
Ralstonia solanacearum PSI07 0.36 RPSI07_RS12920 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 0.31 RPSI07_RS13585 tRNA glutamyl-Q(34) synthetase GluQRS low > 81
Ralstonia solanacearum GMI1000 0.36 RS_RS12005 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 0.32 RS_RS11090 tRNA glutamyl-Q(34) synthetase GluQRS low > 80
Ralstonia sp. UNC404CL21Col 0.36 ABZR87_RS00045 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 0.32 ABZR87_RS15535 tRNA glutamyl-Q(34) synthetase GluQRS low > 80
Acidovorax sp. GW101-3H11 0.35 Ac3H11_987 Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) 0.35 Ac3H11_4162 glutamyl-Q-tRNA synthetase low > 79
Paraburkholderia graminis OAS925 0.35 ABIE53_001254 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 0.36 ABIE53_001439 glutamyl-Q tRNA(Asp) synthetase low > 113
Echinicola vietnamensis KMM 6221, DSM 17526 0.29 Echvi_3757 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase 0.19 Echvi_2874 Glutamyl- and glutaminyl-tRNA synthetases low > 79
Rahnella sp. WP5 0.29 EX31_RS09935 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 0.51 EX31_RS03255 tRNA glutamyl-Q(34) synthetase GluQRS low > 89
Escherichia coli Nissle 1917 0.29 ECOLIN_RS11630 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 0.53 ECOLIN_RS00795 tRNA glutamyl-Q(34) synthetase GluQRS low > 55
Escherichia coli ECRC101 0.28 MCAODC_20265 cobU bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 0.53 MCAODC_00865 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS low > 87
Escherichia coli ECRC98 0.28 JDDGAC_29255 cobU bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 0.53 JDDGAC_13945 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS low > 86
Escherichia fergusonii Becca 0.28 EFB2_01896 Bifunctional adenosylcobalamin biosynthesis protein CobU 0.53 EFB2_03900 Glutamyl-Q tRNA(Asp) synthetase low > 86
Escherichia coli ECOR38 0.28 HEPCGN_03460 cobU bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 0.53 HEPCGN_08300 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS low > 87
Escherichia coli BW25113 0.28 b1993 cobU adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase (NCBI) 0.53 b0144 yadB glutamyl-Q tRNA(Asp) synthetase (RefSeq) low > 76
Escherichia coli BL21 0.28 ECD_01902 cobinamide kinase and cobinamide phosphate guanylyltransferase 0.53 ECD_00143 glutamyl-Q tRNA(Asp) synthetase — —
Escherichia coli ECRC99 0.28 KEDOAH_02985 cobU bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 0.53 KEDOAH_17805 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS — —
Escherichia coli ECRC100 0.28 OKFHMN_25125 cobU bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 0.53 OKFHMN_10350 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS low > 80
Escherichia coli ECRC102 0.28 NIAGMN_22630 cobU bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 0.53 NIAGMN_08200 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.28 GFF3967 Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62) 0.54 GFF88 glutamyl-Q-tRNA synthetase low > 78
Escherichia coli ECOR27 0.28 NOLOHH_16035 cobU bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 0.53 NOLOHH_02695 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS low > 75
Escherichia coli ECRC62 0.28 BNILDI_14865 cobU bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 0.53 BNILDI_08975 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.27 OHPLBJKB_01715 Bifunctional adenosylcobalamin biosynthesis protein CobU 0.53 OHPLBJKB_03518 Glutamyl-Q tRNA(Asp) synthetase low > 73
Klebsiella michiganensis M5al 0.27 BWI76_RS23005 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 0.52 BWI76_RS05010 tRNA glutamyl-Q synthetase low > 92
Synechococcus elongatus PCC 7942 0.22 Synpcc7942_0990 cobU adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase 0.35 Synpcc7942_0922 gltX Glutamate--tRNA ligase — —

Not shown: 20 genomes with orthologs for Sama_0764 only; 16 genomes with orthologs for Sama_0779 only