Conservation of cofitness between BT0682 and BT3186 in Bacteroides thetaiotaomicron VPI-5482

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT0682 two-component system response regulator (NCBI ptt file) 1.0 BT3186 dihydrolipoamide dehydrogenase (NCBI ptt file) 0.37 16
Bacteroides ovatus ATCC 8483 0.86 BACOVA_02385 response regulator receiver domain protein 0.93 BACOVA_02890 dihydrolipoyl dehydrogenase low > 94
Phocaeicola dorei CL03T12C01 0.72 ABI39_RS05370 response regulator transcription factor 0.80 ABI39_RS05965 dihydrolipoyl dehydrogenase low > 72
Mucilaginibacter yixingensis YX-36 DSM 26809 0.44 ABZR88_RS09450 response regulator transcription factor 0.30 ABZR88_RS16575 dihydrolipoyl dehydrogenase — —
Enterobacter sp. TBS_079 0.40 MPMX20_02319 Transcriptional regulatory protein CusR 0.29 MPMX20_00809 Dihydrolipoyl dehydrogenase — —
Enterobacter asburiae PDN3 0.40 EX28DRAFT_1165 heavy metal response regulator 0.29 EX28DRAFT_3712 dihydrolipoamide dehydrogenase — —
Shewanella loihica PV-4 0.40 Shew_3258 two component heavy metal response transcriptional regulator (RefSeq) 0.28 Shew_3429 dihydrolipoamide dehydrogenase (RefSeq) — —
Dickeya dianthicola 67-19 0.39 HGI48_RS03485 heavy metal response regulator transcription factor 0.29 HGI48_RS17840 dihydrolipoyl dehydrogenase — —
Dickeya dianthicola ME23 0.39 DZA65_RS03595 copper/silver response regulator transcription factor SilR 0.29 DZA65_RS18990 dihydrolipoyl dehydrogenase — —
Azospirillum sp. SherDot2 0.39 MPMX19_00794 Transcriptional activator protein CopR 0.32 MPMX19_01102 Dihydrolipoyl dehydrogenase — —
Escherichia coli ECRC98 0.38 JDDGAC_11350 cusR copper response regulator transcription factor CusR 0.29 JDDGAC_14085 lpdA dihydrolipoyl dehydrogenase — —
Burkholderia phytofirmans PsJN 0.38 BPHYT_RS25955 transcriptional regulator 0.29 BPHYT_RS08120 dihydrolipoamide dehydrogenase — —
Escherichia coli ECOR38 0.38 HEPCGN_00585 cusR copper response regulator transcription factor CusR 0.29 HEPCGN_08470 lpdA dihydrolipoyl dehydrogenase — —
Escherichia coli ECRC102 0.38 NIAGMN_05760 cusR copper response regulator transcription factor CusR 0.29 NIAGMN_08340 lpdA dihydrolipoyl dehydrogenase — —
Escherichia coli Nissle 1917 0.38 ECOLIN_RS03125 copper response regulator transcription factor CusR 0.29 ECOLIN_RS00650 dihydrolipoyl dehydrogenase — —
Escherichia fergusonii Becca 0.38 EFB2_03523 Transcriptional regulatory protein CusR 0.29 EFB2_03929 Dihydrolipoyl dehydrogenase — —
Escherichia coli ECRC62 0.38 BNILDI_22095 cusR copper response regulator transcription factor CusR 0.29 BNILDI_08775 lpdA dihydrolipoyl dehydrogenase — —
Escherichia coli BW25113 0.38 b0571 cusR DNA-binding response regulator in two-component regulatory system with CusS (NCBI) 0.29 b0116 lpd dihydrolipoamide dehydrogenase (NCBI) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.38 OHPLBJKB_03138 Transcriptional regulatory protein CusR 0.29 OHPLBJKB_03545 Dihydrolipoyl dehydrogenase — —
Escherichia coli ECRC99 0.38 KEDOAH_20265 cusR copper response regulator transcription factor CusR 0.29 KEDOAH_17665 lpdA dihydrolipoyl dehydrogenase — —
Escherichia coli ECRC101 0.38 MCAODC_26920 cusR copper response regulator transcription factor CusR 0.29 MCAODC_01005 lpdA dihydrolipoyl dehydrogenase — —
Escherichia coli ECRC101 0.38 OKFHMN_07705 cusR copper response regulator transcription factor CusR 0.29 OKFHMN_10490 lpdA dihydrolipoyl dehydrogenase — —
Escherichia coli BL21 0.38 ECD_00532 response regulator in two-component regulatory system with CusS 0.29 ECD_00115 dihydrolipoyl dehydrogenase; E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes; glycine cleavage system L protein; dihydrolipoamide dehydrogenase — —
Escherichia coli ECOR27 0.38 NOLOHH_24085 cusR copper response regulator transcription factor CusR 0.29 NOLOHH_02835 lpdA dihydrolipoyl dehydrogenase — —
Azospirillum brasilense Sp245 0.38 AZOBR_RS10800 XRE family transcriptional regulator 0.35 AZOBR_RS14390 dihydrolipoamide dehydrogenase — —
Pseudomonas stutzeri RCH2 0.38 Psest_1185 heavy metal response regulator 0.31 Psest_2492 dihydrolipoamide dehydrogenase — —
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS15305 heavy metal response regulator transcription factor 0.28 QEN71_RS23050 dihydrolipoyl dehydrogenase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.37 Psyr_1497 Heavy metal response regulator 0.31 Psyr_2011 dihydrolipoamide dehydrogenase — —
Pseudomonas putida KT2440 0.37 PP_1438 response regulator 0.29 PP_4187 dihydrolipoyl dehydrogenase — —
Serratia liquefaciens MT49 0.37 IAI46_16745 heavy metal response regulator transcription factor 0.28 IAI46_21315 dihydrolipoyl dehydrogenase — —
Pseudomonas simiae WCS417 0.37 PS417_18460 transcriptional regulator 0.29 PS417_08905 dihydrolipoamide dehydrogenase — —
Pseudomonas syringae pv. syringae B728a 0.37 Psyr_1497 Heavy metal response regulator 0.31 Psyr_2011 dihydrolipoamide dehydrogenase — —
Pseudomonas fluorescens FW300-N2E3 0.37 AO353_28575 transcriptional regulator 0.29 AO353_01825 dihydrolipoamide dehydrogenase — —
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS20435 heavy metal response regulator transcription factor 0.29 PFLU_RS08965 dihydrolipoyl dehydrogenase — —
Pseudomonas fluorescens SBW25 0.37 PFLU_RS20435 heavy metal response regulator transcription factor 0.29 PFLU_RS08965 dihydrolipoyl dehydrogenase — —
Pseudomonas sp. S08-1 0.37 OH686_22680 Copper-sensing two-component system response regulator CusR 0.30 OH686_01960 dihydrolipoyl dehydrogenase — —
Rahnella sp. WP5 0.37 EX31_RS18870 heavy metal response regulator transcription factor 0.28 EX31_RS03465 dihydrolipoyl dehydrogenase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.37 GFF3258 DNA-binding heavy metal response regulator 0.25 GFF4875 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) — —
Marinobacter adhaerens HP15 0.36 HP15_3484 DNA-binding response regulator 0.29 HP15_1523 dihydrolipoamide dehydrogenase — —
Dechlorosoma suillum PS 0.36 Dsui_2644 heavy metal response regulator 0.29 Dsui_2219 dihydrolipoamide dehydrogenase — —
Pseudomonas sp. RS175 0.36 PFR28_01522 Transcriptional activator protein CzcR 0.30 PFR28_04545 Dihydrolipoyl dehydrogenase 3 low > 88
Pseudomonas fluorescens FW300-N1B4 0.36 Pf1N1B4_4017 DNA-binding heavy metal response regulator 0.30 Pf1N1B4_1976 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) low > 87
Pseudomonas fluorescens GW456-L13 0.36 PfGW456L13_4017 Copper-sensing two-component system response regulator CusR 0.30 PfGW456L13_698 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) low > 87
Pseudomonas fluorescens FW300-N2C3 0.36 AO356_26830 transcriptional regulator 0.30 AO356_19705 dihydrolipoamide dehydrogenase — —
Caulobacter crescentus NA1000 0.36 CCNA_01351 two-component response regulator protein 0.31 CCNA_01805 dihydrolipoamide dehydrogenase — —
Caulobacter crescentus NA1000 Δfur 0.36 CCNA_01351 two-component response regulator protein 0.31 CCNA_01805 dihydrolipoamide dehydrogenase low > 67
Rhodospirillum rubrum S1H 0.36 Rru_A2913 Two component Transcriptional regulator, Winged helix family (NCBI) 0.29 Rru_A1215 Dihydrolipoamide dehydrogenase (NCBI) — —
Pectobacterium carotovorum WPP14 0.36 HER17_RS13650 heavy metal response regulator transcription factor 0.29 HER17_RS03300 dihydrolipoyl dehydrogenase — —
Rhodanobacter sp. FW510-T8 0.36 OKGIIK_04905 DNA-binding response regulator 0.28 OKGIIK_05930 lpdA dihydrolipoyl dehydrogenase — —
Alteromonas macleodii MIT1002 0.36 MIT1002_00247 Transcriptional regulatory protein CusR 0.28 MIT1002_03001 Dihydrolipoyl dehydrogenase — —
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_15165 DNA-binding response regulator 0.30 CSW01_12210 dihydrolipoyl dehydrogenase — —
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_5366 DNA-binding heavy metal response regulator 0.29 Pf6N2E2_4251 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) low > 103
Acidovorax sp. GW101-3H11 0.35 Ac3H11_4585 DNA-binding heavy metal response regulator 0.25 Ac3H11_2465 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) — —
Paraburkholderia bryophila 376MFSha3.1 0.35 H281DRAFT_01736 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR 0.28 H281DRAFT_05115 dihydrolipoamide dehydrogenase — —
Dickeya dadantii 3937 0.35 DDA3937_RS03385 heavy metal response regulator transcription factor 0.29 DDA3937_RS17915 dihydrolipoyl dehydrogenase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.34 GFF3273 Putative two-component system response regulator YedW 0.29 GFF120 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) — —
Mycobacterium tuberculosis H37Rv 0.34 Rv0602c Two component DNA binding transcriptional regulatory protein TcrA 0.23 Rv0462 Dihydrolipoamide dehydrogenase LpdC (lipoamide reductase (NADH)) (lipoyl dehydrogenase) (dihydrolipoyl dehydrogenase) (diaphorase) — —
Agrobacterium fabrum C58 0.33 Atu0978 two component response regulator 0.29 Atu1434 dihydrolipoamide dehydrogenase — —
Sinorhizobium meliloti 1021 0.32 SMc00458 transcriptional regulator 0.31 SMc02487 dihydrolipoamide dehydrogenase — —
Xanthomonas campestris pv. campestris strain 8004 0.32 Xcc-8004.5008.1 Two-component system regulatory protein 0.26 Xcc-8004.3414.1 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) — —
Dyella japonica UNC79MFTsu3.2 0.32 ABZR86_RS18360 response regulator transcription factor 0.28 ABZR86_RS05930 dihydrolipoyl dehydrogenase — —
Synechococcus elongatus PCC 7942 0.31 Synpcc7942_1404 two component transcriptional regulator, winged helix family 0.23 Synpcc7942_1198 phdD dihydrolipoamide dehydrogenase — —
Phaeobacter inhibens DSM 17395 0.28 PGA1_c13010 two-component system response regulator 0.31 PGA1_78p00260 dihydrolipoyl dehydrogenase LpdA — —
Pantoea sp. MT58 0.27 IAI47_00340 response regulator 0.30 IAI47_15800 dihydrolipoyl dehydrogenase — —

Not shown: 13 genomes with orthologs for BT0682 only; 21 genomes with orthologs for BT3186 only