Conservation of cofitness between BT0652 and BT1336 in Bacteroides thetaiotaomicron VPI-5482

69 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT0652 putative thiamine-phosphate pyrophosphorylase (NCBI ptt file) 1.0 BT1336 putative translation initiation inhibitor (NCBI ptt file) 0.36 14
Bacteroides ovatus ATCC 8483 0.88 BACOVA_02360 thiamine-phosphate diphosphorylase 0.96 BACOVA_00589 putative endoribonuclease L-PSP 0.56 92
Phocaeicola vulgatus CL09T03C04 0.73 HMPREF1058_RS03290 thiamine phosphate synthase 0.71 HMPREF1058_RS18400 RidA family protein low > 67
Phocaeicola dorei CL03T12C01 0.71 ABI39_RS17750 thiamine phosphate synthase 0.70 ABI39_RS14715 RidA family protein low > 72
Bacteroides stercoris CC31F 0.63 HMPREF1181_RS14675 thiamine phosphate synthase 0.88 HMPREF1181_RS10885 RidA family protein low > 56
Parabacteroides merdae CL09T00C40 0.47 HMPREF1078_RS03480 thiamine phosphate synthase 0.63 HMPREF1078_RS02020 RidA family protein low > 61
Mucilaginibacter yixingensis YX-36 DSM 26809 0.46 ABZR88_RS08830 thiamine phosphate synthase 0.48 ABZR88_RS17245 RidA family protein — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.45 CA264_20425 thiamine phosphate synthase 0.44 CA264_17590 RidA family protein 0.59 66
Pedobacter sp. GW460-11-11-14-LB5 0.42 CA265_RS20175 thiamine-phosphate diphosphorylase 0.49 CA265_RS22825 reactive intermediate/imine deaminase low > 88
Echinicola vietnamensis KMM 6221, DSM 17526 0.36 Echvi_3565 Thiamine monophosphate synthase 0.43 Echvi_1327 endoribonuclease L-PSP, putative low > 79
Fusobacterium nucleatum SB010 0.26 HUW76_10295 thiamine phosphate synthase 0.49 HUW76_10065 RidA family protein low > 35
Agrobacterium fabrum C58 0.22 Atu3289 thiamine-phosphate pyrophosphorylase 0.32 Atu2498 hypothetical protein low > 89
Pseudomonas fluorescens GW456-L13 0.22 PfGW456L13_1384 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 0.47 PfGW456L13_779 Bona fide RidA/YjgF/TdcF/RutC subgroup low > 87
Caulobacter crescentus NA1000 0.21 CCNA_03373 thiamin-phosphate pyrophosphorylase 0.30 CCNA_02886 RutC-family pyrimidine utilization protein C — —
Caulobacter crescentus NA1000 Δfur 0.21 CCNA_03373 thiamin-phosphate pyrophosphorylase 0.30 CCNA_02886 RutC-family pyrimidine utilization protein C — —
Pseudomonas fluorescens FW300-N1B4 0.21 Pf1N1B4_2717 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 0.47 Pf1N1B4_2112 Bona fide RidA/YjgF/TdcF/RutC subgroup — —
Pseudomonas fluorescens FW300-N2E3 0.21 AO353_06355 thiamine-phosphate pyrophosphorylase 0.47 AO353_09285 reactive intermediate/imine deaminase low > 101
Rhodanobacter sp. FW510-T8 0.21 OKGIIK_17095 Thiamine-phosphate synthase 0.43 OKGIIK_12095 ridA reactive intermediate/imine deaminase low > 52
Rhizobium sp. OAE497 0.21 ABIE40_RS25925 thiamine phosphate synthase 0.27 ABIE40_RS21405 RidA family protein low > 107
Pseudomonas syringae pv. syringae B728a 0.21 Psyr_4341 thiamine-phosphate diphosphorylase 0.49 Psyr_0208 endoribonuclease L-PSP low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.21 Psyr_4341 thiamine-phosphate diphosphorylase 0.49 Psyr_0208 endoribonuclease L-PSP low > 86
Herbaspirillum seropedicae SmR1 0.20 HSERO_RS02140 thiamine-phosphate synthase 0.32 HSERO_RS05705 endoribonuclease L-PSP low > 78
Dyella japonica UNC79MFTsu3.2 0.20 ABZR86_RS17410 thiamine phosphate synthase 0.46 ABZR86_RS11845 RidA family protein — —
Brevundimonas sp. GW460-12-10-14-LB2 0.20 A4249_RS08810 thiamine phosphate synthase 0.20 A4249_RS08755 RidA family protein — —
Pseudomonas fluorescens SBW25-INTG 0.20 PFLU_RS26535 thiamine phosphate synthase 0.47 PFLU_RS29515 RidA family protein 0.40 12
Pseudomonas stutzeri RCH2 0.20 Psest_0536 thiamine-phosphate pyrophosphorylase 0.44 Psest_3818 endoribonuclease L-PSP, putative low > 67
Pseudomonas fluorescens SBW25 0.20 PFLU_RS26535 thiamine phosphate synthase 0.47 PFLU_RS29515 RidA family protein low > 109
Pseudomonas sp. RS175 0.20 PFR28_03844 Thiamine-phosphate synthase 0.47 PFR28_04425 2-iminobutanoate/2-iminopropanoate deaminase low > 88
Pseudomonas simiae WCS417 0.20 PS417_24605 thiamine-phosphate pyrophosphorylase 0.47 PS417_27835 endoribonuclease low > 88
Pseudomonas fluorescens FW300-N2C3 0.19 AO356_15430 thiamine-phosphate pyrophosphorylase 0.48 AO356_12475 reactive intermediate/imine deaminase low > 104
Dickeya dianthicola ME23 0.19 DZA65_RS01210 thiamine phosphate synthase 0.54 DZA65_RS01960 2-iminobutanoate/2-iminopropanoate deaminase low > 75
Pectobacterium carotovorum WPP14 0.19 HER17_RS20385 thiamine phosphate synthase 0.50 HER17_RS19520 2-iminobutanoate/2-iminopropanoate deaminase low > 75
Dickeya dianthicola 67-19 0.19 HGI48_RS01165 thiamine phosphate synthase 0.54 HGI48_RS01890 2-iminobutanoate/2-iminopropanoate deaminase — —
Enterobacter asburiae PDN3 0.19 EX28DRAFT_4535 thiamine-phosphate diphosphorylase 0.53 EX28DRAFT_3444 reactive intermediate/imine deaminase low > 76
Pseudomonas fluorescens FW300-N2E2 0.19 Pf6N2E2_5023 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 0.48 Pf6N2E2_4360 Bona fide RidA/YjgF/TdcF/RutC subgroup low > 103
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.19 GFF4199 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 0.55 GFF928 Endoribonuclease L-PSP low > 78
Dickeya dadantii 3937 0.19 DDA3937_RS01170 thiamine phosphate synthase 0.53 DDA3937_RS01915 2-iminobutanoate/2-iminopropanoate deaminase low > 74
Marinobacter adhaerens HP15 0.19 HP15_348 thiamine-phosphate pyrophosphorylase 0.39 HP15_306 YjgF-like protein — —
Pseudomonas putida KT2440 0.18 PP_4783 Thiamine-phosphate synthase 0.47 PP_5303 aminoacrylate/iminopropionate hydrolase/deaminase — —
Enterobacter sp. TBS_079 0.18 MPMX20_00216 Thiamine-phosphate synthase 0.54 MPMX20_00542 2-iminobutanoate/2-iminopropanoate deaminase low > 85
Rahnella sp. WP5 0.18 EX31_RS16810 thiamine phosphate synthase 0.53 EX31_RS12775 2-iminobutanoate/2-iminopropanoate deaminase low > 89
Klebsiella michiganensis M5al 0.18 BWI76_RS01550 thiamine phosphate synthase 0.54 BWI76_RS02985 reactive intermediate/imine deaminase low > 92
Castellaniella sp019104865 MT123 0.18 ABCV34_RS10745 thiamine phosphate synthase 0.41 ABCV34_RS03565 Rid family detoxifying hydrolase — —
Escherichia coli ECOR38 0.18 HEPCGN_12015 thiE thiamine phosphate synthase 0.52 HEPCGN_10070 ridA 2-iminobutanoate/2-iminopropanoate deaminase low > 85
Escherichia coli Nissle 1917 0.18 ECOLIN_RS23035 thiamine phosphate synthase 0.52 ECOLIN_RS24615 2-iminobutanoate/2-iminopropanoate deaminase low > 52
Escherichia fergusonii Becca 0.18 EFB2_04618 Thiamine-phosphate synthase 0.52 EFB2_04290 2-iminobutanoate/2-iminopropanoate deaminase low > 86
Escherichia coli ECRC62 0.18 BNILDI_06000 thiE thiamine phosphate synthase 0.52 BNILDI_07375 ridA 2-iminobutanoate/2-iminopropanoate deaminase — —
Escherichia coli BL21 0.18 ECD_03870 thiamine phosphate synthase (thiamine phosphate pyrophosphorylase) 0.52 ECD_04111 enamine/imine deaminase, reaction intermediate detoxification low > 60
Escherichia coli ECOR27 0.18 NOLOHH_05525 thiE thiamine phosphate synthase 0.52 NOLOHH_04135 ridA 2-iminobutanoate/2-iminopropanoate deaminase low > 57
Escherichia coli BW25113 0.18 b3993 thiE thiamine-phosphate pyrophosphorylase (NCBI) 0.52 b4243 yjgF orf, hypothetical protein (VIMSS) low > 76
Escherichia coli ECRC101 0.18 OKFHMN_13380 thiE thiamine phosphate synthase 0.52 OKFHMN_11875 ridA 2-iminobutanoate/2-iminopropanoate deaminase — —
Escherichia coli ECRC99 0.18 KEDOAH_14780 thiE thiamine phosphate synthase 0.52 KEDOAH_16280 ridA 2-iminobutanoate/2-iminopropanoate deaminase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.18 OHPLBJKB_04057 Thiamine-phosphate synthase 0.52 OHPLBJKB_03791 2-iminobutanoate/2-iminopropanoate deaminase low > 73
Escherichia coli ECRC102 0.18 NIAGMN_11130 thiE thiamine phosphate synthase 0.52 NIAGMN_09725 ridA 2-iminobutanoate/2-iminopropanoate deaminase — —
Escherichia coli ECRC101 0.18 MCAODC_03880 thiE thiamine phosphate synthase 0.52 MCAODC_02380 ridA 2-iminobutanoate/2-iminopropanoate deaminase — —
Escherichia coli ECRC98 0.18 JDDGAC_17005 thiE thiamine phosphate synthase 0.52 JDDGAC_15515 ridA 2-iminobutanoate/2-iminopropanoate deaminase — —
Dinoroseobacter shibae DFL-12 0.17 Dshi_0911 Thiamine-phosphate diphosphorylase (RefSeq) 0.35 Dshi_0720 Endoribonuclease L-PSP (RefSeq) low > 64
Pantoea sp. MT58 0.17 IAI47_18090 thiamine phosphate synthase 0.55 IAI47_16870 2-iminobutanoate/2-iminopropanoate deaminase 0.27 56
Magnetospirillum magneticum AMB-1 0.17 AMB_RS14385 thiamine phosphate synthase 0.20 AMB_RS19400 RidA family protein — —
Rhodanobacter denitrificans FW104-10B01 0.16 LRK54_RS06575 thiamine phosphate synthase 0.43 LRK54_RS11800 RidA family protein low > 59
Rhodanobacter denitrificans MT42 0.16 LRK55_RS06320 thiamine phosphate synthase 0.43 LRK55_RS11525 RidA family protein low > 63
Ralstonia solanacearum IBSBF1503 0.16 RALBFv3_RS16440 thiamine phosphate synthase 0.40 RALBFv3_RS20925 endoribonuclease L-PSP — —
Ralstonia solanacearum UW163 0.16 UW163_RS17185 thiamine phosphate synthase 0.40 UW163_RS22060 endoribonuclease L-PSP — —
Serratia liquefaciens MT49 0.16 IAI46_01315 thiamine phosphate synthase 0.48 IAI46_02265 2-iminobutanoate/2-iminopropanoate deaminase low > 86
Ralstonia solanacearum GMI1000 0.15 RS_RS21865 thiamine phosphate synthase 0.31 RS_RS23660 RidA family protein — —
Sinorhizobium meliloti 1021 0.15 SM_b20618 thiamine-phosphate pyrophosphorylase 0.32 SM_b21139 translation initiation inhibitors low > 103
Ralstonia solanacearum PSI07 0.15 RPSI07_RS04350 thiamine phosphate synthase 0.29 RPSI07_RS05465 RidA family protein low > 81
Erwinia tracheiphila SCR3 0.13 LU632_RS00965 thiE thiamine phosphate synthase 0.51 LU632_RS20960 ridA 2-iminobutanoate/2-iminopropanoate deaminase low > 74
Bosea sp. OAE506 0.13 ABIE41_RS20180 thiamine phosphate synthase 0.27 ABIE41_RS17855 RidA family protein — —
Rhodopseudomonas palustris CGA009 0.12 TX73_018535 thiamine phosphate synthase 0.24 TX73_018610 RidA family protein — —

Not shown: 4 genomes with orthologs for BT0652 only; 30 genomes with orthologs for BT1336 only