Conservation of cofitness between BT2122 and BT1146 in Bacteroides thetaiotaomicron VPI-5482

63 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT2122 lysyl-tRNA synthetase (NCBI ptt file) 1.0 BT1146 putative metallo-beta-lactamase (NCBI ptt file) 0.23 11
Bacteroides ovatus ATCC 8483 0.97 BACOVA_03235 lysine--tRNA ligase 0.99 BACOVA_04039 metallo-beta-lactamase domain protein
Bacteroides stercoris CC31F 0.91 HMPREF1181_RS08565 lysine--tRNA ligase 0.91 HMPREF1181_RS16810 MBL fold metallo-hydrolase
Parabacteroides merdae CL09T00C40 0.85 HMPREF1078_RS10065 lysine--tRNA ligase 0.48 HMPREF1078_RS15120 MBL fold metallo-hydrolase low > 61
Phocaeicola dorei CL03T12C01 0.84 ABI39_RS21140 lysine--tRNA ligase 0.85 ABI39_RS15105 MBL fold metallo-hydrolase
Phocaeicola vulgatus CL09T03C04 0.84 HMPREF1058_RS07265 lysine--tRNA ligase 0.85 HMPREF1058_RS18785 MBL fold metallo-hydrolase
Mucilaginibacter yixingensis YX-36 DSM 26809 0.61 ABZR88_RS01670 lysine--tRNA ligase 0.41 ABZR88_RS20045 MBL fold metallo-hydrolase
Echinicola vietnamensis KMM 6221, DSM 17526 0.60 Echvi_0118 Lysyl-tRNA synthetase (class II) 0.46 Echvi_2827 Zn-dependent hydrolases, including glyoxylases
Pedobacter sp. GW460-11-11-14-LB5 0.56 CA265_RS10855 lysine--tRNA ligase 0.41 CA265_RS19735 MBL fold hydrolase
Pontibacter actiniarum KMM 6156, DSM 19842 0.53 CA264_13200 lysine--tRNA ligase 0.45 CA264_14615 MBL fold hydrolase
Pectobacterium carotovorum WPP14 0.38 HER17_RS17870 lysine--tRNA ligase 0.32 HER17_RS12035 MBL fold metallo-hydrolase
Serratia liquefaciens MT49 0.38 IAI46_20710 lysine--tRNA ligase 0.33 IAI46_08745 MBL fold metallo-hydrolase
Klebsiella michiganensis M5al 0.38 BWI76_RS07205 lysine--tRNA ligase 0.33 BWI76_RS09865 MBL fold hydrolase low > 92
Escherichia coli ECRC101 0.38 OKFHMN_12485 lysS lysine--tRNA ligase 0.34 OKFHMN_05390 gloC hydroxyacylglutathione hydrolase GloC
Escherichia coli HS(pFamp)R (ATCC 700891) 0.38 OHPLBJKB_03914 Lysine--tRNA ligase, heat inducible 0.34 OHPLBJKB_02740 Hydroxyacylglutathione hydrolase GloC low > 73
Escherichia coli ECOR38 0.38 HEPCGN_11120 lysS lysine--tRNA ligase 0.34 HEPCGN_23135 gloC hydroxyacylglutathione hydrolase GloC low > 85
Dickeya dadantii 3937 0.38 DDA3937_RS03320 lysine--tRNA ligase 0.34 DDA3937_RS12920 MBL fold metallo-hydrolase
Escherichia coli ECRC101 0.38 MCAODC_02995 lysS lysine--tRNA ligase 0.34 MCAODC_24780 gloC hydroxyacylglutathione hydrolase GloC
Escherichia coli ECRC99 0.38 KEDOAH_15680 lysS lysine--tRNA ligase 0.34 KEDOAH_22345 gloC hydroxyacylglutathione hydrolase GloC
Escherichia coli ECRC98 0.38 JDDGAC_16120 lysS lysine--tRNA ligase 0.34 JDDGAC_09000 gloC hydroxyacylglutathione hydrolase GloC
Escherichia coli Nissle 1917 0.38 ECOLIN_RS23895 lysine--tRNA ligase 0.34 ECOLIN_RS04905 hydroxyacylglutathione hydrolase GloC
Dickeya dianthicola ME23 0.38 DZA65_RS03505 lysine--tRNA ligase 0.34 DZA65_RS13455 MBL fold metallo-hydrolase
Escherichia coli BW25113 0.38 b4129 lysU lysine tRNA synthetase, inducible (NCBI) 0.34 b0927 ycbL predicted metal-binding enzyme (NCBI) low > 76
Escherichia coli ECRC102 0.38 NIAGMN_10330 lysS lysine--tRNA ligase 0.34 NIAGMN_03110 gloC hydroxyacylglutathione hydrolase GloC
Escherichia coli ECOR27 0.38 NOLOHH_04750 lysS lysine--tRNA ligase 0.34 NOLOHH_21950 gloC hydroxyacylglutathione hydrolase GloC
Escherichia coli BL21 0.38 ECD_04000 lysine tRNA synthetase, inducible 0.34 ECD_00931 putative metal-binding enzyme low > 60
Dickeya dianthicola 67-19 0.38 HGI48_RS03460 lysine--tRNA ligase 0.35 HGI48_RS12995 MBL fold metallo-hydrolase
Erwinia tracheiphila SCR3 0.38 LU632_RS05995 lysS lysine--tRNA ligase 0.32 LU632_RS09895 MBL fold metallo-hydrolase
Escherichia coli ECRC62 0.38 BNILDI_06740 lysS lysine--tRNA ligase 0.34 BNILDI_20205 gloC hydroxyacylglutathione hydrolase GloC
Escherichia fergusonii Becca 0.38 EFB2_04453 Lysine--tRNA ligase, heat inducible 0.34 EFB2_03137 Hydroxyacylglutathione hydrolase GloC low > 86
Ralstonia solanacearum GMI1000 0.38 RS_RS05090 lysine--tRNA ligase 0.32 RS_RS16370 MBL fold metallo-hydrolase
Ralstonia solanacearum PSI07 0.38 RPSI07_RS19155 lysine--tRNA ligase 0.32 RPSI07_RS08720 MBL fold metallo-hydrolase
Ralstonia sp. UNC404CL21Col 0.38 ABZR87_RS10025 lysine--tRNA ligase 0.32 ABZR87_RS03825 MBL fold metallo-hydrolase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF2987 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) 0.35 GFF3684 Hypothetical metal-binding enzyme, YcbL homolog
Rahnella sp. WP5 0.38 EX31_RS13460 lysine--tRNA ligase 0.29 EX31_RS18150 MBL fold metallo-hydrolase
Enterobacter asburiae PDN3 0.37 EX28DRAFT_2941 Lysyl-tRNA synthetase (class II) 0.33 EX28DRAFT_2009 Zn-dependent hydrolases, including glyoxylases
Pantoea sp. MT58 0.37 IAI47_03840 lysine--tRNA ligase 0.33 IAI47_12770 MBL fold metallo-hydrolase
Ralstonia solanacearum UW163 0.37 UW163_RS11775 lysine--tRNA ligase 0.32 UW163_RS05105 MBL fold metallo-hydrolase
Ralstonia solanacearum IBSBF1503 0.37 RALBFv3_RS14310 lysine--tRNA ligase 0.32 RALBFv3_RS08505 MBL fold metallo-hydrolase
Fusobacterium nucleatum SB010 0.37 HUW76_07700 lysine--tRNA ligase 0.19 HUW76_06550 MBL fold metallo-hydrolase
Enterobacter sp. TBS_079 0.37 MPMX20_03749 Lysine--tRNA ligase 0.33 MPMX20_01585 Hydroxyacylglutathione hydrolase GloC
Paraburkholderia sabiae LMG 24235 0.36 QEN71_RS05825 lysine--tRNA ligase 0.31 QEN71_RS00645 MBL fold metallo-hydrolase
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS06070 lysyl-tRNA synthetase 0.32 RR42_RS19750 MBL fold metallo-hydrolase
Burkholderia phytofirmans PsJN 0.36 BPHYT_RS12740 lysine--tRNA ligase 0.30 BPHYT_RS01930 hypothetical protein
Paraburkholderia graminis OAS925 0.36 ABIE53_002773 lysyl-tRNA synthetase class 2 0.31 ABIE53_000468 hydroxyacylglutathione hydrolase
Paraburkholderia bryophila 376MFSha3.1 0.35 H281DRAFT_00486 lysyl-tRNA synthetase, class II 0.30 H281DRAFT_02154 Glyoxylase, beta-lactamase superfamily II
Herbaspirillum seropedicae SmR1 0.35 HSERO_RS13995 lysyl-tRNA synthetase 0.17 HSERO_RS17120 hydroxyacylglutathione hydrolase
Acinetobacter radioresistens SK82 0.35 MPMX26_02328 Lysine--tRNA ligase, heat inducible 0.32 MPMX26_00296 Hydroxyacylglutathione hydrolase GloC
Pseudomonas stutzeri RCH2 0.34 Psest_1549 Lysyl-tRNA synthetase (class II) 0.29 Psest_3219 Zn-dependent hydrolases, including glyoxylases
Shewanella loihica PV-4 0.34 Shew_0812 lysS lysyl-tRNA synthetase (RefSeq) 0.33 Shew_2269 beta-lactamase domain-containing protein (RefSeq)
Vibrio cholerae E7946 ATCC 55056 0.34 CSW01_03495 lysine--tRNA ligase 0.36 CSW01_06415 MBL fold metallo-hydrolase
Desulfovibrio vulgaris Hildenborough JW710 0.34 DVU2376 lysS lysyl-tRNA synthetase (TIGR) 0.27 DVU2765 metallo-beta-lactamase family protein (TIGR)
Desulfovibrio vulgaris Miyazaki F 0.34 DvMF_2993 lysyl-tRNA synthetase (RefSeq) 0.30 DvMF_2853 beta-lactamase domain protein (RefSeq)
Shewanella amazonensis SB2B 0.33 Sama_2877 lysS lysyl-tRNA synthetase (RefSeq) 0.33 Sama_2142 metallo-beta-lactamase family protein (RefSeq)
Pseudomonas putida KT2440 0.33 PP_1496 Lysine--tRNA ligase 0.27 PP_0772 Metallo-beta-lactamase family protein
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_4749 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) 0.28 PfGW456L13_1623 Hypothetical metal-binding enzyme, YcbL homolog
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_04205 lysine--tRNA ligase 0.28 AO353_15160 MBL fold metallo-hydrolase
Pseudomonas fluorescens FW300-N1B4 0.33 Pf1N1B4_3042 Lysyl-tRNA synthetase (class II) (EC 6.1.1.6) 0.28 Pf1N1B4_2963 Hypothetical metal-binding enzyme, YcbL homolog
Alteromonas macleodii MIT1002 0.33 MIT1002_01216 Lysine--tRNA ligase, heat inducible 0.35 MIT1002_03450 Beta-lactamase hydrolase-like protein
Marinobacter adhaerens HP15 0.33 HP15_768 lysyl-tRNA synthetase 0.36 HP15_1191 metallo-beta-lactamase family protein
Sinorhizobium meliloti 1021 0.32 SMc03173 lysyl-tRNA synthetase 0.31 SMc01587 hypothetical protein
Rhizobium sp. OAE497 0.32 ABIE40_RS16880 lysine--tRNA ligase 0.29 ABIE40_RS12965 MBL fold metallo-hydrolase
Agrobacterium fabrum C58 0.31 Atu4473 lysyl-tRNA synthetase 0.29 Atu2201 hydrolase
Mycobacterium tuberculosis H37Rv 0.30 Rv3598c Lysyl-tRNA synthetase 1 LysS (lysine--tRNA ligase 1) (LysRS 1) (lysine translase) 0.30 Rv2581c Possible glyoxalase II (hydroxyacylglutathione hydrolase) (GLX II)

Not shown: 12 genomes with orthologs for BT2122 only; 21 genomes with orthologs for BT1146 only