Conservation of cofitness between BT4572 and BT0155 in Bacteroides thetaiotaomicron VPI-5482

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT4572 enolase (NCBI ptt file) 1.0 BT0155 putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) 0.74 2
Bacteroides ovatus ATCC 8483 0.98 BACOVA_05370 phosphopyruvate hydratase 0.90 BACOVA_01282 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase low > 94
Bacteroides stercoris CC31F 0.90 HMPREF1181_RS13285 phosphopyruvate hydratase 0.82 HMPREF1181_RS05285 tRNA 2-thiouridine(34) synthase MnmA low > 56
Phocaeicola dorei CL03T12C01 0.89 ABI39_RS04000 phosphopyruvate hydratase 0.77 ABI39_RS02190 tRNA 2-thiouridine(34) synthase MnmA low > 72
Parabacteroides merdae CL09T00C40 0.86 HMPREF1078_RS16810 phosphopyruvate hydratase 0.67 HMPREF1078_RS10900 tRNA 2-thiouridine(34) synthase MnmA — —
Phocaeicola vulgatus CL09T03C04 0.85 HMPREF1058_RS17225 phosphopyruvate hydratase 0.76 HMPREF1058_RS02880 tRNA 2-thiouridine(34) synthase MnmA low > 67
Echinicola vietnamensis KMM 6221, DSM 17526 0.71 Echvi_0225 phosphopyruvate hydratase 0.26 Echvi_3454 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase — —
Acidovorax sp. GW101-3H11 0.63 Ac3H11_291 Enolase (EC 4.2.1.11) 0.27 Ac3H11_4372 tRNA-specific 2-thiouridylase MnmA — —
Variovorax sp. SCN45 0.63 GFF2753 Enolase (EC 4.2.1.11) 0.30 GFF4912 tRNA-specific 2-thiouridylase MnmA (EC 2.8.1.13) — —
Paraburkholderia graminis OAS925 0.62 ABIE53_002762 enolase 0.28 ABIE53_000810 tRNA-specific 2-thiouridylase — —
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS13910 enolase 0.26 HSERO_RS03470 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase — —
Paraburkholderia bryophila 376MFSha3.1 0.62 H281DRAFT_00497 enolase 0.28 H281DRAFT_04651 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase — —
Variovorax sp. OAS795 0.62 ABID97_RS20195 phosphopyruvate hydratase 0.28 ABID97_RS04415 tRNA 2-thiouridine(34) synthase MnmA — —
Burkholderia phytofirmans PsJN 0.62 BPHYT_RS12675 enolase 0.27 BPHYT_RS03360 tRNA-specific 2-thiouridylase MnmA — —
Paraburkholderia sabiae LMG 24235 0.61 QEN71_RS05880 phosphopyruvate hydratase 0.28 QEN71_RS26740 tRNA 2-thiouridine(34) synthase MnmA — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF5442 Enolase (EC 4.2.1.11) 0.29 GFF2600 tRNA-specific 2-thiouridylase MnmA — —
Dechlorosoma suillum PS 0.61 Dsui_2317 phosphopyruvate hydratase 0.28 Dsui_3336 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase — —
Kangiella aquimarina DSM 16071 0.60 B158DRAFT_2283 phosphopyruvate hydratase 0.30 B158DRAFT_1839 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase — —
Castellaniella sp019104865 MT123 0.60 ABCV34_RS00805 phosphopyruvate hydratase 0.27 ABCV34_RS06800 tRNA 2-thiouridine(34) synthase MnmA — —
Lysobacter sp. OAE881 0.59 ABIE51_RS06445 phosphopyruvate hydratase 0.28 ABIE51_RS11510 tRNA 2-thiouridine(34) synthase MnmA — —
Pseudomonas putida KT2440 0.59 PP_1612 Enolase 0.30 PP_4014 tRNA-specific 2-thiouridylase MnmA — —
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_3104 Enolase (EC 4.2.1.11) 0.30 Pf1N1B4_4048 tRNA-specific 2-thiouridylase MnmA — —
Pseudomonas fluorescens FW300-N2E3 0.58 AO353_16560 enolase 0.30 AO353_27705 tRNA 2-thiouridylase — —
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_4686 Enolase (EC 4.2.1.11) 0.30 PfGW456L13_2639 tRNA-specific 2-thiouridylase MnmA — —
Pseudomonas fluorescens SBW25 0.58 PFLU_RS06375 phosphopyruvate hydratase 0.30 PFLU_RS18580 tRNA 2-thiouridine(34) synthase MnmA — —
Pseudomonas fluorescens FW300-N2E2 0.58 Pf6N2E2_3048 Enolase (EC 4.2.1.11) 0.30 Pf6N2E2_286 tRNA-specific 2-thiouridylase MnmA — —
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS06375 phosphopyruvate hydratase 0.30 PFLU_RS18580 tRNA 2-thiouridine(34) synthase MnmA — —
Pseudomonas fluorescens FW300-N2C3 0.58 AO356_05940 enolase 0.29 AO356_22110 tRNA 2-thiouridylase — —
Pseudomonas simiae WCS417 0.58 PS417_06310 enolase 0.30 PS417_16540 tRNA 2-thiouridylase — —
Shewanella amazonensis SB2B 0.58 Sama_1036 eno phosphopyruvate hydratase (RefSeq) 0.31 Sama_2062 mnmA tRNA-specific 2-thiouridylase MnmA (RefSeq) — —
Pseudomonas syringae pv. syringae B728a 0.58 Psyr_1363 enolase 0.30 Psyr_3190 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.58 Psyr_1363 enolase 0.30 Psyr_3190 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.58 OHPLBJKB_00952 Enolase 0.29 OHPLBJKB_02535 tRNA-specific 2-thiouridylase MnmA — —
Pseudomonas sp. RS175 0.58 PFR28_00416 Enolase 0.30 PFR28_02619 tRNA-specific 2-thiouridylase MnmA — —
Escherichia coli ECRC102 0.58 NIAGMN_18045 eno phosphopyruvate hydratase 0.29 NIAGMN_24890 mnmA tRNA 2-thiouridine(34) synthase MnmA — —
Escherichia coli ECOR38 0.58 HEPCGN_19525 eno phosphopyruvate hydratase 0.29 HEPCGN_24220 mnmA tRNA 2-thiouridine(34) synthase MnmA — —
Escherichia fergusonii Becca 0.58 EFB2_01136 Enolase 0.30 EFB2_02842 tRNA-specific 2-thiouridylase MnmA — —
Escherichia coli ECRC99 0.58 KEDOAH_07855 eno phosphopyruvate hydratase 0.29 KEDOAH_24830 mnmA tRNA 2-thiouridine(34) synthase MnmA — —
Escherichia coli ECRC62 0.58 BNILDI_10655 eno phosphopyruvate hydratase 0.29 BNILDI_19065 mnmA tRNA 2-thiouridine(34) synthase MnmA — —
Escherichia coli BW25113 0.58 b2779 eno phosphopyruvate hydratase (NCBI) 0.29 b1133 ycfB orf, hypothetical protein (VIMSS) — —
Escherichia coli ECRC98 0.58 JDDGAC_23940 eno phosphopyruvate hydratase 0.29 JDDGAC_06620 mnmA tRNA 2-thiouridine(34) synthase MnmA — —
Escherichia coli ECRC101 0.58 MCAODC_10800 eno phosphopyruvate hydratase 0.29 MCAODC_22340 mnmA tRNA 2-thiouridine(34) synthase MnmA — —
Escherichia coli ECRC101 0.58 OKFHMN_20275 eno phosphopyruvate hydratase 0.29 OKFHMN_00745 mnmA tRNA 2-thiouridine(34) synthase MnmA — —
Escherichia coli ECOR27 0.58 NOLOHH_12150 eno phosphopyruvate hydratase 0.29 NOLOHH_20900 mnmA tRNA 2-thiouridine(34) synthase MnmA — —
Escherichia coli Nissle 1917 0.58 ECOLIN_RS15500 phosphopyruvate hydratase 0.29 ECOLIN_RS06625 tRNA 2-thiouridine(34) synthase MnmA — —
Escherichia coli BL21 0.58 ECD_02624 enolase 0.29 ECD_01131 tRNA(Gln,Lys,Glu) U34 2-thiouridylase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF4832 Enolase (EC 4.2.1.11) 0.29 GFF3418 tRNA-specific 2-thiouridylase MnmA — —
Enterobacter sp. TBS_079 0.58 MPMX20_03650 Enolase 0.30 MPMX20_01817 tRNA-specific 2-thiouridylase MnmA — —
Klebsiella michiganensis M5al 0.58 BWI76_RS22790 phosphopyruvate hydratase 0.29 BWI76_RS11315 tRNA 2-thiouridine(34) synthase MnmA — —
Marinobacter adhaerens HP15 0.57 HP15_1274 phosphopyruvate hydratase 0.27 HP15_2086 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase — —
Enterobacter asburiae PDN3 0.57 EX28DRAFT_2861 phosphopyruvate hydratase 0.30 EX28DRAFT_1797 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase — —
Dickeya dianthicola 67-19 0.57 HGI48_RS17055 phosphopyruvate hydratase 0.32 HGI48_RS11530 tRNA 2-thiouridine(34) synthase MnmA — —
Dickeya dianthicola ME23 0.57 DZA65_RS18130 phosphopyruvate hydratase 0.32 DZA65_RS11865 tRNA 2-thiouridine(34) synthase MnmA — —
Shewanella sp. ANA-3 0.57 Shewana3_1116 eno phosphopyruvate hydratase (RefSeq) 0.29 Shewana3_1747 mnmA tRNA-specific 2-thiouridylase MnmA (RefSeq) — —
Shewanella loihica PV-4 0.57 Shew_1205 phosphopyruvate hydratase (RefSeq) 0.31 Shew_1560 trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (RefSeq) — —
Dickeya dadantii 3937 0.57 DDA3937_RS17000 phosphopyruvate hydratase 0.32 DDA3937_RS11485 tRNA 2-thiouridine(34) synthase MnmA — —
Pseudomonas sp. S08-1 0.56 OH686_06385 phosphopyruvate hydratase 0.29 OH686_00210 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase — —
Pectobacterium carotovorum WPP14 0.56 HER17_RS04130 phosphopyruvate hydratase 0.31 HER17_RS11625 tRNA 2-thiouridine(34) synthase MnmA — —
Pseudomonas stutzeri RCH2 0.56 Psest_2822 phosphopyruvate hydratase 0.30 Psest_2021 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase — —
Pantoea sp. MT58 0.56 IAI47_04135 phosphopyruvate hydratase 0.28 IAI47_11915 tRNA 2-thiouridine(34) synthase MnmA — —
Serratia liquefaciens MT49 0.56 IAI46_03615 phosphopyruvate hydratase 0.31 IAI46_10440 tRNA 2-thiouridine(34) synthase MnmA — —
Vibrio cholerae E7946 ATCC 55056 0.55 CSW01_12390 enolase 0.28 CSW01_05725 tRNA 2-thiouridine(34) synthase MnmA — —
Shewanella oneidensis MR-1 0.53 SO3440 eno enolase (NCBI ptt file) 0.30 SO2633 trmU tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (NCBI ptt file) — —

Not shown: 41 genomes with orthologs for BT4572 only; 0 genomes with orthologs for BT0155 only