Conservation of cofitness between b3008 and b3770 in Escherichia coli BW25113

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3008 metC cystathionine beta-lyase (NCBI) 1.0 b3770 ilvE branched-chain amino acid aminotransferase (NCBI) 0.94 4
Escherichia coli Nissle 1917 1.00 ECOLIN_RS17315 cystathionine beta-lyase 1.00 ECOLIN_RS21660 branched-chain-amino-acid transaminase low > 52
Escherichia coli ECOR27 1.00 NOLOHH_10735 metC cystathionine beta-lyase 1.00 NOLOHH_06780 ilvE branched-chain-amino-acid transaminase low > 57
Escherichia coli ECRC62 1.00 BNILDI_00780 metC cystathionine beta-lyase 1.00 BNILDI_04745 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00693 Cystathionine beta-lyase MetC 1.00 OHPLBJKB_04283 Branched-chain-amino-acid aminotransferase low > 73
Escherichia fergusonii Becca 0.99 EFB2_00802 Cystathionine beta-lyase MetC 1.00 EFB2_04866 Branched-chain-amino-acid aminotransferase low > 86
Escherichia coli ECRC99 0.99 KEDOAH_09185 metC cystathionine beta-lyase 1.00 KEDOAH_13505 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC101 0.99 OKFHMN_18960 metC cystathionine beta-lyase 1.00 OKFHMN_14645 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECOR38 0.99 HEPCGN_17825 metC cystathionine beta-lyase 1.00 HEPCGN_13355 ilvE branched-chain-amino-acid transaminase low > 85
Escherichia coli ECRC98 0.99 JDDGAC_22595 metC cystathionine beta-lyase 1.00 JDDGAC_18265 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli ECRC102 0.99 NIAGMN_16725 metC cystathionine beta-lyase 1.00 NIAGMN_12400 ilvE branched-chain-amino-acid transaminase — —
Escherichia coli BL21 0.99 ECD_02881 cystathionine beta-lyase, PLP-dependent 1.00 ECD_03648 branched-chain amino acid aminotransferase 0.71 41
Escherichia coli ECRC101 0.99 MCAODC_09475 metC cystathionine beta-lyase 1.00 MCAODC_05150 ilvE branched-chain-amino-acid transaminase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.90 GFF3120 Cystathionine beta-lyase (EC 4.4.1.8) 0.98 GFF2902 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 78
Klebsiella michiganensis M5al 0.88 BWI76_RS24285 cystathionine beta-lyase 0.97 BWI76_RS00970 branched chain amino acid aminotransferase low > 92
Enterobacter asburiae PDN3 0.88 EX28DRAFT_3046 cystathionine beta-lyase, bacterial 0.98 EX28DRAFT_4442 branched-chain amino acid aminotransferase, group I 0.94 4
Enterobacter sp. TBS_079 0.87 MPMX20_03852 Cystathionine beta-lyase MetC 0.99 MPMX20_04500 Branched-chain-amino-acid aminotransferase low > 85
Pectobacterium carotovorum WPP14 0.78 HER17_RS19690 cystathionine beta-lyase 0.90 HER17_RS01070 branched-chain amino acid transaminase 0.87 73
Dickeya dadantii 3937 0.77 DDA3937_RS01815 cystathionine beta-lyase 0.91 DDA3937_RS20160 branched-chain-amino-acid transaminase 0.81 46
Rahnella sp. WP5 0.77 EX31_RS08025 cystathionine beta-lyase 0.90 EX31_RS15000 branched-chain amino acid transaminase 0.50 6
Dickeya dianthicola 67-19 0.76 HGI48_RS01710 cystathionine beta-lyase 0.90 HGI48_RS20300 branched-chain-amino-acid transaminase low > 71
Dickeya dianthicola ME23 0.76 DZA65_RS01785 cystathionine beta-lyase 0.91 DZA65_RS21340 branched-chain amino acid transaminase 0.84 22
Serratia liquefaciens MT49 0.76 IAI46_21725 cystathionine beta-lyase 0.92 IAI46_24350 branched-chain-amino-acid transaminase low > 86
Pantoea sp. MT58 0.75 IAI47_03215 cystathionine beta-lyase 0.91 IAI47_01030 branched-chain amino acid transaminase low > 76
Erwinia tracheiphila SCR3 0.73 LU632_RS20545 metC cystathionine beta-lyase 0.90 LU632_RS24405 branched-chain amino acid transaminase 0.89 9
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_08400 cystathionine beta-lyase 0.75 CSW01_00145 branched-chain-amino-acid transaminase low > 62
Shewanella loihica PV-4 0.53 Shew_1789 cystathionine beta-lyase (RefSeq) 0.68 Shew_0291 branched-chain amino acid aminotransferase (RefSeq) 0.92 38
Shewanella oneidensis MR-1 0.52 SO2191 metC cystathionine beta-lyase (NCBI ptt file) 0.19 SO0340 ilvE branched-chain amino acid aminotransferase (NCBI ptt file) 0.86 57
Shewanella sp. ANA-3 0.51 Shewana3_2414 cystathionine beta-lyase (RefSeq) 0.19 Shewana3_3830 branched-chain amino acid aminotransferase (RefSeq) 0.88 42
Shewanella amazonensis SB2B 0.50 Sama_2008 cystathionine beta-lyase (RefSeq) 0.19 Sama_3299 branched-chain amino acid aminotransferase (RefSeq) 0.81 21
Azospirillum brasilense Sp245 0.44 AZOBR_RS08650 cystathionine beta-lyase 0.31 AZOBR_RS16425 branched-chain amino acid aminotransferase low > 97
Sphingomonas koreensis DSMZ 15582 0.44 Ga0059261_1388 cystathionine beta-lyase, bacterial 0.23 Ga0059261_3811 branched-chain amino acid aminotransferase, group II low > 68
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF5026 Cystathionine beta-lyase (EC 4.4.1.8) 0.46 GFF1835 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 90
Rhodopseudomonas palustris CGA009 0.41 TX73_013235 cystathionine beta-lyase 0.18 TX73_022650 branched-chain amino acid aminotransferase — —
Rhizobium sp. OAE497 0.40 ABIE40_RS08820 cystathionine beta-lyase 0.19 ABIE40_RS22240 branched-chain amino acid aminotransferase low > 107
Magnetospirillum magneticum AMB-1 0.40 AMB_RS06585 cystathionine beta-lyase 0.31 AMB_RS02850 branched-chain amino acid aminotransferase — —
Sinorhizobium meliloti 1021 0.40 SMc02117 cystathionine beta-lyase 0.21 SMc02896 branched-chain amino acid aminotransferase low > 103
Rhodospirillum rubrum S1H 0.40 Rru_A1613 Cystathionine beta-lyase (NCBI) 0.32 Rru_A2223 Branched-chain amino acid aminotransferase I (NCBI) low > 58
Azospirillum sp. SherDot2 0.40 MPMX19_01339 Cystathionine beta-lyase MetC 0.18 MPMX19_02406 Branched-chain-amino-acid aminotransferase low > 112
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_24330 cystathionine beta-lyase 0.20 AO353_26655 branched-chain amino acid aminotransferase low > 101
Agrobacterium fabrum C58 0.38 Atu1575 cystathionine beta lyase 0.18 Atu0871 branched-chain-amino-acid aminotransferase low > 89
Caulobacter crescentus NA1000 Δfur 0.37 CCNA_01491 cystathionine beta-lyase 0.31 CCNA_03024 branched-chain amino acid aminotransferase low > 67
Caulobacter crescentus NA1000 0.37 CCNA_01491 cystathionine beta-lyase 0.31 CCNA_03024 branched-chain amino acid aminotransferase low > 66
Ralstonia sp. UNC404CL21Col 0.37 ABZR87_RS11250 cystathionine beta-lyase 0.25 ABZR87_RS18540 branched-chain amino acid aminotransferase low > 80
Variovorax sp. SCN45 0.36 GFF1749 Cystathionine beta-lyase (EC 4.4.1.8) 0.44 GFF5079 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 127
Variovorax sp. OAS795 0.36 ABID97_RS22430 cystathionine beta-lyase 0.44 ABID97_RS03790 branched-chain amino acid transaminase low > 91
Ralstonia solanacearum PSI07 0.35 RPSI07_RS02185 cystathionine beta-lyase 0.45 RPSI07_RS21175 branched-chain amino acid transaminase 0.35 81
Ralstonia solanacearum UW163 0.35 UW163_RS18620 cystathionine beta-lyase 0.46 UW163_RS01455 branched-chain amino acid transaminase — —
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS20555 cystathionine beta-lyase 0.46 RALBFv3_RS12155 branched-chain amino acid transaminase low > 76
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS22165 cystathionine beta-lyase 0.44 QEN71_RS02410 branched-chain amino acid transaminase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_00859 cystathionine beta-lyase 0.43 H281DRAFT_04193 branched chain amino acid aminotransferase apoenzyme low > 103
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS09190 cystathionine beta-lyase 0.43 BPHYT_RS16285 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) low > 109
Cupriavidus basilensis FW507-4G11 0.34 RR42_RS07655 cystathionine beta-lyase 0.20 RR42_RS25890 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) low > 128
Pseudomonas syringae pv. syringae B728a ΔmexB 0.33 Psyr_0607 cystathionine beta-lyase 0.22 Psyr_1148 branched chain amino acid aminotransferase apoenzyme low > 86
Pseudomonas syringae pv. syringae B728a 0.33 Psyr_0607 cystathionine beta-lyase 0.22 Psyr_1148 branched chain amino acid aminotransferase apoenzyme low > 86
Castellaniella sp019104865 MT123 0.33 ABCV34_RS12385 PLP-dependent aspartate aminotransferase family protein 0.45 ABCV34_RS07930 branched-chain amino acid transaminase low > 48
Ralstonia solanacearum GMI1000 0.32 RS_RS08260 cystathionine beta-lyase 0.45 RS_RS02840 branched-chain amino acid transaminase low > 80
Herbaspirillum seropedicae SmR1 0.31 HSERO_RS14995 cystathionine beta-lyase 0.44 HSERO_RS03330 branched-chain amino acid aminotransferase low > 78
Brevundimonas sp. GW460-12-10-14-LB2 0.31 A4249_RS05585 cystathionine beta-lyase 0.27 A4249_RS09820 branched-chain amino acid aminotransferase — —
Bosea sp. OAE506 0.29 ABIE41_RS01480 cystathionine beta-lyase 0.28 ABIE41_RS11405 branched-chain amino acid aminotransferase low > 77
Acidovorax sp. GW101-3H11 0.28 Ac3H11_4146 Cystathionine beta-lyase (EC 4.4.1.8) 0.46 Ac3H11_3369 Branched-chain amino acid aminotransferase (EC 2.6.1.42) low > 79
Acinetobacter radioresistens SK82 0.22 MPMX26_02724 Cystathionine beta-lyase 0.40 MPMX26_00445 Branched-chain-amino-acid aminotransferase low > 36
Phaeobacter inhibens DSM 17395 0.21 PGA1_c16720 putative pyridoxal phosphate-dependent transferase 0.29 PGA1_c34110 branched-chain-amino-acid aminotransferase IlvE low > 62

Not shown: 0 genomes with orthologs for b3008 only; 40 genomes with orthologs for b3770 only