Conservation of cofitness between b2565 and b2616 in Escherichia coli BW25113

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2565 recO DNA repair protein RecO (NCBI) 1.0 b2616 recN recombination and repair protein (NCBI) 0.49 14
Escherichia coli Nissle 1917 1.00 ECOLIN_RS14520 DNA repair protein RecO 0.99 ECOLIN_RS14775 DNA repair protein RecN — —
Escherichia coli ECRC101 1.00 OKFHMN_21420 recO DNA repair protein RecO 0.99 OKFHMN_21145 recN DNA repair protein RecN — —
Escherichia coli ECRC101 1.00 MCAODC_11950 recO DNA repair protein RecO 0.99 MCAODC_11670 recN DNA repair protein RecN — —
Escherichia coli ECRC99 1.00 KEDOAH_06800 recO DNA repair protein RecO 0.99 KEDOAH_07075 recN DNA repair protein RecN — —
Escherichia coli ECRC102 1.00 NIAGMN_19190 recO DNA repair protein RecO 0.99 NIAGMN_18915 recN DNA repair protein RecN — —
Escherichia coli ECRC98 1.00 JDDGAC_25085 recO DNA repair protein RecO 0.99 JDDGAC_24810 recN DNA repair protein RecN — —
Escherichia coli BL21 1.00 ECD_02459 gap repair protein 1.00 ECD_02504 recombination and repair protein low > 60
Escherichia fergusonii Becca 1.00 EFB2_01331 DNA repair protein RecO 0.99 EFB2_01277 DNA repair protein RecN low > 86
Escherichia coli ECOR27 1.00 NOLOHH_13095 recO DNA repair protein RecO 1.00 NOLOHH_12815 recN DNA repair protein RecN low > 57
Escherichia coli ECRC62 1.00 BNILDI_11895 recO DNA repair protein RecO 1.00 BNILDI_11620 recN DNA repair protein RecN — —
Escherichia coli ECOR38 1.00 HEPCGN_20565 recO DNA repair protein RecO 0.99 HEPCGN_20265 recN DNA repair protein RecN low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01142 DNA repair protein RecO 1.00 OHPLBJKB_01091 DNA repair protein RecN low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF2473 DNA recombination and repair protein RecO 0.92 GFF4162 DNA repair protein RecN low > 78
Klebsiella michiganensis M5al 0.90 BWI76_RS21310 DNA repair protein RecO 0.84 BWI76_RS21560 DNA repair protein RecN 0.23 62
Enterobacter asburiae PDN3 0.90 EX28DRAFT_0081 DNA replication and repair protein RecO 0.86 EX28DRAFT_2719 DNA repair protein RecN low > 76
Enterobacter sp. TBS_079 0.81 MPMX20_03436 DNA repair protein RecO 0.85 MPMX20_03486 DNA repair protein RecN low > 85
Dickeya dadantii 3937 0.81 DDA3937_RS15725 DNA repair protein RecO 0.73 DDA3937_RS04325 DNA repair protein RecN low > 74
Pantoea sp. MT58 0.80 IAI47_04890 DNA repair protein RecO 0.77 IAI47_04810 DNA repair protein RecN low > 76
Dickeya dianthicola 67-19 0.80 HGI48_RS15810 DNA repair protein RecO 0.72 HGI48_RS04320 DNA repair protein RecN low > 71
Dickeya dianthicola ME23 0.80 DZA65_RS16890 DNA repair protein RecO 0.72 DZA65_RS04235 DNA repair protein RecN low > 75
Erwinia tracheiphila SCR3 0.78 LU632_RS15375 recO DNA repair protein RecO 0.73 LU632_RS16985 recN DNA repair protein RecN low > 74
Rahnella sp. WP5 0.78 EX31_RS21845 DNA repair protein RecO 0.75 EX31_RS21760 DNA repair protein RecN low > 89
Pectobacterium carotovorum WPP14 0.78 HER17_RS05825 DNA repair protein RecO 0.72 HER17_RS17420 DNA repair protein RecN 0.63 4
Serratia liquefaciens MT49 0.76 IAI46_19540 DNA repair protein RecO 0.77 IAI46_19635 DNA repair protein RecN 0.57 26
Vibrio cholerae E7946 ATCC 55056 0.62 CSW01_12445 DNA repair protein RecO 0.53 CSW01_04395 DNA repair protein RecN low > 62
Marinobacter adhaerens HP15 0.31 HP15_786 DNA repair protein RecO 0.40 HP15_3084 DNA repair protein RecN 0.63 1
Pseudomonas sp. S08-1 0.29 OH686_20090 DNA repair protein RecO 0.39 OH686_17050 DNA repair protein RecN low > 80
Shewanella loihica PV-4 0.29 Shew_1056 DNA repair protein RecO (RefSeq) 0.53 Shew_1196 recombination and repair protein (RefSeq) 0.66 13
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_17505 DNA repair protein RecO 0.38 AO356_07510 DNA repair protein RecN 0.67 5
Shewanella oneidensis MR-1 0.29 SO1350 recO DNA repair protein RecO (NCBI ptt file) 0.55 SO3462 recN DNA repair protein RecN (NCBI ptt file) 0.44 10
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_5428 DNA recombination and repair protein RecO 0.39 Pf6N2E2_3370 DNA repair protein RecN 0.66 3
Pseudomonas stutzeri RCH2 0.28 Psest_3090 DNA repair protein RecO 0.38 Psest_0962 DNA repair protein RecN 0.75 5
Shewanella sp. ANA-3 0.28 Shewana3_3024 DNA repair protein RecO (RefSeq) 0.55 Shewana3_1104 recombination and repair protein (RefSeq) 0.72 8
Ralstonia solanacearum GMI1000 0.28 RS_RS05275 DNA repair protein RecO 0.35 RS_RS13275 DNA repair protein RecN low > 80
Alteromonas macleodii MIT1002 0.28 MIT1002_00790 Recombination protein O 0.43 MIT1002_01443 Recombination protein N low > 70
Pseudomonas putida KT2440 0.28 PP_1435 DNA repair protein RecO 0.37 PP_4729 factor used in recombination and DNA repair low > 96
Ralstonia solanacearum PSI07 0.28 RPSI07_RS18965 DNA repair protein RecO 0.36 RPSI07_RS11890 DNA repair protein RecN low > 81
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_04500 DNA repair protein RecO 0.38 AO353_05660 DNA repair protein RecN low > 101
Pseudomonas sp. RS175 0.28 PFR28_03521 DNA repair protein RecO 0.39 PFR28_00071 DNA repair protein RecN low > 88
Ralstonia solanacearum UW163 0.28 UW163_RS11960 DNA repair protein RecO 0.36 UW163_RS08210 DNA repair protein RecN — —
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_890 DNA recombination and repair protein RecO 0.39 Pf1N1B4_1178 DNA repair protein RecN 0.32 14
Ralstonia solanacearum IBSBF1503 0.28 RALBFv3_RS14495 DNA repair protein RecO 0.36 RALBFv3_RS05415 DNA repair protein RecN low > 76
Shewanella amazonensis SB2B 0.28 Sama_0882 DNA repair protein RecO (RefSeq) 0.54 Sama_1026 recombination and repair protein (RefSeq) 0.67 7
Dyella japonica UNC79MFTsu3.2 0.28 ABZR86_RS07140 DNA repair protein RecO 0.34 ABZR86_RS05665 DNA repair protein RecN 0.67 11
Ralstonia sp. UNC404CL21Col 0.27 ABZR87_RS10215 DNA repair protein RecO 0.36 ABZR87_RS01065 DNA repair protein RecN low > 80
Pseudomonas fluorescens SBW25 0.27 PFLU_RS05270 DNA repair protein RecO 0.38 PFLU_RS25910 DNA repair protein RecN low > 109
Pseudomonas simiae WCS417 0.27 PS417_05200 DNA recombination protein RecO 0.39 PS417_24070 recombination and repair protein 0.24 74
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS05270 DNA repair protein RecO 0.38 PFLU_RS25910 DNA repair protein RecN 0.27 13
Rhodanobacter denitrificans MT42 0.27 LRK55_RS16695 DNA repair protein RecO 0.33 LRK55_RS17815 DNA repair protein RecN low > 63
Rhodanobacter denitrificans FW104-10B01 0.27 LRK54_RS16980 DNA repair protein RecO 0.33 LRK54_RS17960 DNA repair protein RecN 0.34 13
Pseudomonas fluorescens GW456-L13 0.27 PfGW456L13_4838 DNA recombination and repair protein RecO 0.40 PfGW456L13_5106 DNA repair protein RecN 0.39 7
Rhodanobacter sp. FW510-T8 0.27 OKGIIK_07860 recO DNA repair protein RecO 0.33 OKGIIK_07340 recN DNA repair protein RecN low > 52
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_3949 DNA replication and repair protein RecO 0.38 Psyr_4197 DNA replication and repair protein RecN 0.33 26
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_3949 DNA replication and repair protein RecO 0.38 Psyr_4197 DNA replication and repair protein RecN 0.30 10
Lysobacter sp. OAE881 0.25 ABIE51_RS13850 DNA repair protein RecO 0.31 ABIE51_RS11655 DNA repair protein RecN low > 62
Kangiella aquimarina DSM 16071 0.25 B158DRAFT_2189 DNA replication and repair protein RecO 0.37 B158DRAFT_0601 DNA replication and repair protein RecN 0.60 9
Dechlorosoma suillum PS 0.25 Dsui_2462 DNA repair protein RecO 0.33 Dsui_3072 DNA repair protein RecN 0.93 5
Xanthomonas campestris pv. campestris strain 8004 0.24 Xcc-8004.3671.1 DNA recombination and repair protein RecO 0.30 Xcc-8004.3431.1 DNA repair protein RecN low > 74
Acinetobacter radioresistens SK82 0.18 MPMX26_02153 DNA repair protein RecO 0.29 MPMX26_00239 DNA repair protein RecN low > 36
Hydrogenophaga sp. GW460-11-11-14-LB1 0.17 GFF3348 DNA recombination and repair protein RecO 0.32 GFF829 DNA repair protein RecN low > 90
Variovorax sp. SCN45 0.16 GFF3872 DNA recombination and repair protein RecO 0.32 GFF2357 DNA repair protein RecN low > 127
Acidovorax sp. GW101-3H11 0.14 Ac3H11_1564 DNA recombination and repair protein RecO 0.32 Ac3H11_3460 DNA repair protein RecN low > 79

Not shown: 1 genomes with orthologs for b2565 only; 37 genomes with orthologs for b2616 only