Conservation of cofitness between b3942 and b3353 in Escherichia coli BW25113

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3942 katG catalase/hydroperoxidase HPI(I) (NCBI) 1.0 b3353 yheT predicted hydrolase (NCBI) 0.27 16
Escherichia coli ECRC62 1.00 BNILDI_05730 katG catalase/peroxidase HPI 0.99 BNILDI_02460 yheT hydrolase
Escherichia coli BL21 1.00 ECD_03828 catalase-peroxidase HPI, heme b-containing 1.00 ECD_03204 UPF0017 family putative hydrolase low > 60
Escherichia coli ECRC101 1.00 MCAODC_04160 katG catalase/peroxidase HPI 0.99 MCAODC_07790 yheT hydrolase
Escherichia coli ECRC98 1.00 JDDGAC_17285 katG catalase/peroxidase HPI 0.99 JDDGAC_20890 yheT hydrolase
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04108 Catalase-peroxidase 0.99 OHPLBJKB_00349 hypothetical protein low > 73
Escherichia coli ECRC101 1.00 OKFHMN_13660 katG catalase/peroxidase HPI 0.99 OKFHMN_17260 yheT hydrolase
Escherichia coli ECOR27 1.00 NOLOHH_05805 katG catalase/peroxidase HPI 0.99 NOLOHH_09060 yheT hydrolase low > 57
Escherichia coli ECRC102 1.00 NIAGMN_11415 katG catalase/peroxidase HPI 0.99 NIAGMN_15030 yheT hydrolase
Escherichia coli ECRC99 1.00 KEDOAH_14500 katG catalase/peroxidase HPI 0.99 KEDOAH_10880 yheT hydrolase
Escherichia fergusonii Becca 1.00 EFB2_04671 Catalase-peroxidase 0.99 EFB2_00469 hypothetical protein low > 86
Escherichia coli Nissle 1917 1.00 ECOLIN_RS22765 catalase/peroxidase HPI 0.99 ECOLIN_RS19205 hydrolase low > 52
Escherichia coli ECOR38 1.00 HEPCGN_12305 katG catalase/peroxidase HPI 0.99 HEPCGN_16085 yheT hydrolase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF2330 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) 0.83 GFF3716 Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase low > 78
Enterobacter asburiae PDN3 0.87 EX28DRAFT_4414 catalase/peroxidase HPI 0.79 EX28DRAFT_4176 Predicted hydrolase of the alpha/beta-hydrolase fold low > 76
Enterobacter sp. TBS_079 0.87 MPMX20_04528 Catalase-peroxidase 0.80 MPMX20_04256 hypothetical protein low > 85
Rahnella sp. WP5 0.81 EX31_RS11140 catalase/peroxidase HPI 0.67 EX31_RS04515 hydrolase low > 89
Klebsiella michiganensis M5al 0.80 BWI76_RS13925 catalase/peroxidase HPI 0.76 BWI76_RS25965 hydrolase low > 92
Pantoea sp. MT58 0.80 IAI47_07215 catalase/peroxidase HPI 0.63 IAI47_01985 hydrolase low > 76
Pseudomonas sp. S08-1 0.69 OH686_15490 catalase/peroxidase HPI 0.32 OH686_14200 Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.68 GFF637 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) 0.24 GFF2952 Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase low > 90
Echinicola vietnamensis KMM 6221, DSM 17526 0.64 Echvi_1165 catalase/peroxidase HPI 0.24 Echvi_3887 Predicted hydrolase of the alpha/beta-hydrolase fold low > 79
Burkholderia phytofirmans PsJN 0.62 BPHYT_RS10310 catalase-peroxidase 0.30 BPHYT_RS16305 alpha/beta hydrolase low > 109
Ralstonia solanacearum PSI07 0.61 RPSI07_RS20110 catalase/peroxidase HPI 0.29 RPSI07_RS21195 alpha/beta hydrolase low > 81
Ralstonia solanacearum IBSBF1503 0.61 RALBFv3_RS13105 catalase/peroxidase HPI 0.30 RALBFv3_RS12135 alpha/beta hydrolase low > 76
Ralstonia solanacearum UW163 0.61 UW163_RS00460 catalase/peroxidase HPI 0.30 UW163_RS01475 alpha/beta hydrolase
Herbaspirillum seropedicae SmR1 0.61 HSERO_RS06245 catalase-peroxidase 0.27 HSERO_RS03315 alpha/beta hydrolase low > 78
Dickeya dadantii 3937 0.61 DDA3937_RS07265 catalase/peroxidase HPI 0.61 DDA3937_RS19425 hydrolase low > 74
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS26270 hydroperoxidase 0.29 RR42_RS03155 alpha/beta hydrolase low > 128
Serratia liquefaciens MT49 0.61 IAI46_17030 catalase/peroxidase HPI 0.63 IAI46_23560 hydrolase low > 86
Pseudomonas fluorescens FW300-N2E2 0.61 Pf6N2E2_3430 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) 0.34 Pf6N2E2_4578 Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase low > 103
Pseudomonas fluorescens FW300-N2C3 0.61 AO356_07735 hydroperoxidase 0.34 AO356_13315 alpha/beta hydrolase low > 104
Variovorax sp. SCN45 0.60 GFF4692 Catalase-peroxidase KatG (EC 1.11.1.21) 0.25 GFF3721 Hydrolase, alpha/beta fold family low > 127
Paraburkholderia sabiae LMG 24235 0.60 QEN71_RS29740 catalase/peroxidase HPI 0.30 QEN71_RS02390 hydrolase low > 153
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_4208 heme catalase/peroxidase 0.34 Psyr_4755 hydrolase, alpha/beta fold family low > 86
Pseudomonas fluorescens FW300-N2E3 0.60 AO353_23210 hydroperoxidase 0.30 AO353_08270 alpha/beta hydrolase low > 101
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_4208 heme catalase/peroxidase 0.34 Psyr_4755 hydrolase, alpha/beta fold family low > 86
Xanthomonas campestris pv. campestris strain 8004 0.60 Xcc-8004.3762.1 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) 0.08 Xcc-8004.237.1 FIG01211085: hypothetical protein low > 74
Rhodopseudomonas palustris CGA009 0.60 TX73_002230 catalase/peroxidase HPI 0.25 TX73_003645 alpha/beta fold hydrolase low > 86
Pseudomonas putida KT2440 0.60 PP_3668 Catalase-peroxidase 0.35 PP_5117 putative hydrolase low > 96
Dyella japonica UNC79MFTsu3.2 0.60 ABZR86_RS00615 catalase/peroxidase HPI 0.12 ABZR86_RS15340 alpha/beta fold hydrolase low > 74
Paraburkholderia bryophila 376MFSha3.1 0.60 H281DRAFT_00053 catalase-peroxidase 0.27 H281DRAFT_04197 hypothetical protein low > 103
Pseudomonas fluorescens FW300-N1B4 0.58 Pf1N1B4_4230 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) 0.32 Pf1N1B4_2319 Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase low > 87
Acidovorax sp. GW101-3H11 0.58 Ac3H11_135 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) 0.25 Ac3H11_4444 Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase low > 79
Vibrio cholerae E7946 ATCC 55056 0.58 CSW01_07835 catalase-peroxidase 0.48 CSW01_13215 hydrolase low > 62
Pseudomonas stutzeri RCH2 0.58 Psest_2741 catalase/peroxidase HPI 0.31 Psest_0253 Predicted hydrolase of the alpha/beta-hydrolase fold low > 67
Dechlorosoma suillum PS 0.58 Dsui_2233 catalase/peroxidase HPI 0.27 Dsui_3343 putative hydrolase of the alpha/beta-hydrolase fold protein low > 51
Synechococcus elongatus PCC 7942 0.56 Synpcc7942_1656 katG catalase/peroxidase HPI 0.11 Synpcc7942_0582 hypothetical protein low > 38
Pectobacterium carotovorum WPP14 0.56 HER17_RS09165 catalase/peroxidase HPI 0.64 HER17_RS01935 hydrolase low > 75
Kangiella aquimarina DSM 16071 0.56 B158DRAFT_0317 catalase/peroxidase HPI 0.32 B158DRAFT_0767 Predicted hydrolase of the alpha/beta-hydrolase fold low > 40
Marinobacter adhaerens HP15 0.56 HP15_1397 peroxidase/catalase HPI 0.21 HP15_1383 AB-hydrolase YheT, putative low > 73
Shewanella oneidensis MR-1 0.55 SO4405 katG-2 catalase/peroxidase HPI (NCBI ptt file) 0.38 SO0880 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.54 Sama_0745 catalase (RefSeq) 0.38 Sama_3000 hypothetical protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.54 Shewana3_0306 catalase/peroxidase HPI (RefSeq) 0.37 Shewana3_3398 alpha/beta hydrolase fold (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.51 MIT1002_03345 Catalase-peroxidase 2 precursor 0.39 MIT1002_03999 putative hydrolase low > 70
Shewanella loihica PV-4 0.50 Shew_0709 catalase/peroxidase HPI (RefSeq) 0.37 Shew_0589 alpha/beta hydrolase fold (RefSeq) low > 60

Not shown: 19 genomes with orthologs for b3942 only; 16 genomes with orthologs for b3353 only