Conservation of cofitness between b0677 and b3197 in Escherichia coli BW25113

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b0677 nagA N-acetylglucosamine-6-phosphate deacetylase (NCBI) 1.0 b3197 kdsD D-arabinose 5-phosphate isomerase (NCBI) 0.35 14
Escherichia coli ECRC101 1.00 MCAODC_26380 nagA N-acetylglucosamine-6-phosphate deacetylase 1.00 MCAODC_08485 kdsD arabinose-5-phosphate isomerase KdsD — —
Escherichia coli ECRC62 1.00 BNILDI_21550 nagA N-acetylglucosamine-6-phosphate deacetylase 1.00 BNILDI_01770 kdsD arabinose-5-phosphate isomerase KdsD — —
Escherichia coli ECOR27 1.00 NOLOHH_23545 nagA N-acetylglucosamine-6-phosphate deacetylase 1.00 NOLOHH_09765 kdsD arabinose-5-phosphate isomerase KdsD low > 57
Escherichia coli ECRC98 1.00 JDDGAC_10815 nagA N-acetylglucosamine-6-phosphate deacetylase 1.00 JDDGAC_21590 kdsD arabinose-5-phosphate isomerase KdsD — —
Escherichia coli ECRC101 1.00 OKFHMN_07165 nagA N-acetylglucosamine-6-phosphate deacetylase 1.00 OKFHMN_17965 kdsD arabinose-5-phosphate isomerase KdsD — —
Escherichia coli ECRC102 1.00 NIAGMN_05220 nagA N-acetylglucosamine-6-phosphate deacetylase 1.00 NIAGMN_15725 kdsD arabinose-5-phosphate isomerase KdsD — —
Escherichia coli ECRC99 1.00 KEDOAH_20805 nagA N-acetylglucosamine-6-phosphate deacetylase 1.00 KEDOAH_10185 kdsD arabinose-5-phosphate isomerase KdsD — —
Escherichia coli ECOR38 1.00 HEPCGN_01065 nagA N-acetylglucosamine-6-phosphate deacetylase 1.00 HEPCGN_16840 kdsD arabinose-5-phosphate isomerase KdsD low > 85
Escherichia coli BL21 1.00 ECD_00634 N-acetylglucosamine-6-phosphate deacetylase 1.00 ECD_03062 D-arabinose 5-phosphate isomerase low > 60
Escherichia coli Nissle 1917 1.00 ECOLIN_RS03615 N-acetylglucosamine-6-phosphate deacetylase 0.99 ECOLIN_RS18400 arabinose-5-phosphate isomerase KdsD low > 52
Escherichia fergusonii Becca 1.00 EFB2_03426 N-acetylglucosamine-6-phosphate deacetylase 1.00 EFB2_00626 Arabinose 5-phosphate isomerase KdsD low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03038 N-acetylglucosamine-6-phosphate deacetylase 1.00 OHPLBJKB_00503 Arabinose 5-phosphate isomerase KdsD low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF4585 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) 0.92 GFF2941 Arabinose 5-phosphate isomerase (EC 5.3.1.13) low > 78
Enterobacter asburiae PDN3 0.91 EX28DRAFT_2298 N-acetylglucosamine-6-phosphate deacetylase 0.90 EX28DRAFT_3251 KpsF/GutQ family protein low > 76
Enterobacter sp. TBS_079 0.90 MPMX20_01323 N-acetylglucosamine-6-phosphate deacetylase 0.89 MPMX20_04103 Arabinose 5-phosphate isomerase KdsD low > 85
Klebsiella michiganensis M5al 0.89 BWI76_RS08210 N-acetylglucosamine-6-phosphate deacetylase 0.83 BWI76_RS25240 D-arabinose 5-phosphate isomerase low > 92
Serratia liquefaciens MT49 0.78 IAI46_06085 N-acetylglucosamine-6-phosphate deacetylase 0.81 IAI46_22445 arabinose-5-phosphate isomerase KdsD low > 86
Rahnella sp. WP5 0.78 EX31_RS23260 N-acetylglucosamine-6-phosphate deacetylase 0.80 EX31_RS12425 arabinose-5-phosphate isomerase KdsD — —
Pantoea sp. MT58 0.76 IAI47_13885 N-acetylglucosamine-6-phosphate deacetylase 0.78 IAI47_17160 arabinose-5-phosphate isomerase KdsD — —
Pectobacterium carotovorum WPP14 0.75 HER17_RS15110 N-acetylglucosamine-6-phosphate deacetylase 0.78 HER17_RS20035 arabinose-5-phosphate isomerase KdsD — —
Erwinia tracheiphila SCR3 0.73 LU632_RS16250 nagA N-acetylglucosamine-6-phosphate deacetylase 0.80 LU632_RS21255 kdsD arabinose-5-phosphate isomerase KdsD — —
Dickeya dianthicola 67-19 0.73 HGI48_RS06350 N-acetylglucosamine-6-phosphate deacetylase 0.81 HGI48_RS01470 arabinose-5-phosphate isomerase KdsD — —
Dickeya dadantii 3937 0.72 DDA3937_RS06305 N-acetylglucosamine-6-phosphate deacetylase 0.81 DDA3937_RS01555 arabinose-5-phosphate isomerase KdsD — —
Dickeya dianthicola ME23 0.72 DZA65_RS06695 N-acetylglucosamine-6-phosphate deacetylase 0.81 DZA65_RS01535 arabinose-5-phosphate isomerase KdsD — —
Vibrio cholerae E7946 ATCC 55056 0.62 CSW01_05070 N-acetylglucosamine-6-phosphate deacetylase 0.62 CSW01_12790 KpsF/GutQ family sugar-phosphate isomerase — —
Lysobacter sp. OAE881 0.35 ABIE51_RS01635 N-acetylglucosamine-6-phosphate deacetylase 0.52 ABIE51_RS15930 KpsF/GutQ family sugar-phosphate isomerase — —
Azospirillum brasilense Sp245 0.34 AZOBR_RS11675 N-acetylglucosamine 6-phosphate deacetylase 0.43 AZOBR_RS18850 arabinose 5-phosphate isomerase — —
Rhodanobacter denitrificans FW104-10B01 0.34 LRK54_RS07855 N-acetylglucosamine-6-phosphate deacetylase 0.52 LRK54_RS12900 KpsF/GutQ family sugar-phosphate isomerase — —
Rhodanobacter denitrificans MT42 0.34 LRK55_RS07585 N-acetylglucosamine-6-phosphate deacetylase 0.52 LRK55_RS12600 KpsF/GutQ family sugar-phosphate isomerase — —
Dyella japonica UNC79MFTsu3.2 0.34 ABZR86_RS16045 N-acetylglucosamine-6-phosphate deacetylase 0.52 ABZR86_RS19840 KpsF/GutQ family sugar-phosphate isomerase — —
Rhodanobacter sp. FW510-T8 0.33 OKGIIK_14345 nagA N-acetylglucosamine-6-phosphate deacetylase 0.53 OKGIIK_02290 gutQ D-arabinose 5-phosphate isomerase — —
Caulobacter crescentus NA1000 0.33 CCNA_00452 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) 0.40 CCNA_02346 arabinose-5-phosphate isomerase — —
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_00452 N-acetylglucosamine-6-phosphate deacetylase 0.40 CCNA_02346 arabinose-5-phosphate isomerase 0.75 14
Azospirillum sp. SherDot2 0.32 MPMX19_03613 N-acetylglucosamine-6-phosphate deacetylase 0.42 MPMX19_02664 Arabinose 5-phosphate isomerase KdsD low > 112
Mucilaginibacter yixingensis YX-36 DSM 26809 0.32 ABZR88_RS01260 N-acetylglucosamine-6-phosphate deacetylase 0.37 ABZR88_RS12810 SIS domain-containing protein — —
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.957.1 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) 0.54 Xcc-8004.1667.1 Arabinose 5-phosphate isomerase (EC 5.3.1.13) — —
Agrobacterium fabrum C58 0.29 Atu2608 N-acetylglucosamine-6-phosphate deacetylase 0.40 Atu3774 capsule expression protein — —
Phaeobacter inhibens DSM 17395 0.29 PGA1_c27880 N-acetylglucosamine-6-phosphate deacetylase NagA 0.40 PGA1_c36010 arabinose 5-phosphate isomerase KdsD — —
Pedobacter sp. GW460-11-11-14-LB5 0.29 CA265_RS18930 N-acetylglucosamine-6-phosphate deacetylase 0.37 CA265_RS08900 D-arabinose 5-phosphate isomerase low > 88
Sinorhizobium meliloti 1021 0.28 SMc02878 N-acetylglucosamine-6-phosphate deacetylase 0.36 SM_b20830 arabinose-5-phosphate isomerase — —
Shewanella sp. ANA-3 0.28 Shewana3_3112 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) 0.58 Shewana3_0677 KpsF/GutQ family protein (RefSeq) — —
Rhizobium sp. OAE497 0.28 ABIE40_RS18570 N-acetylglucosamine-6-phosphate deacetylase 0.37 ABIE40_RS16240 KpsF/GutQ family sugar-phosphate isomerase — —
Shewanella oneidensis MR-1 0.28 SO3505 nagA N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) 0.58 SO3956 carbohydrate isomerase, KpsF/GutQ family (NCBI ptt file) — —
Shewanella loihica PV-4 0.27 Shew_1117 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) 0.57 Shew_3306 KpsF/GutQ family protein (RefSeq) — —
Shewanella amazonensis SB2B 0.27 Sama_0946 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) 0.58 Sama_3083 arabinose-5-phosphate isomerase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.26 MIT1002_00910 N-acetylglucosamine-6-phosphate deacetylase 0.55 MIT1002_00832 Arabinose 5-phosphate isomerase KdsD — —
Synechococcus elongatus PCC 7942 0.24 Synpcc7942_0440 nagA N-acetylglucosamine 6-phosphate deacetylase 0.36 Synpcc7942_2291 KpsF/GutQ family protein — —
Fusobacterium nucleatum SB010 0.19 HUW76_07090 N-acetylglucosamine-6-phosphate deacetylase 0.40 HUW76_05670 KpsF/GutQ family sugar-phosphate isomerase — —
Pseudomonas fluorescens GW456-L13 0.18 PfGW456L13_4830 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) 0.55 PfGW456L13_5009 Arabinose 5-phosphate isomerase (EC 5.3.1.13) — —
Pseudomonas fluorescens FW300-N2E3 0.18 AO353_04450 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) 0.56 AO353_05155 D-arabinose 5-phosphate isomerase — —
Burkholderia phytofirmans PsJN 0.18 BPHYT_RS02730 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) 0.49 BPHYT_RS02930 KpsF/GutQ family protein low > 109
Paraburkholderia bryophila 376MFSha3.1 0.18 H281DRAFT_01979 N-acetylglucosamine 6-phosphate deacetylase 0.49 H281DRAFT_01922 arabinose-5-phosphate isomerase low > 103
Pseudomonas fluorescens SBW25-INTG 0.18 PFLU_RS24645 N-acetylglucosamine-6-phosphate deacetylase 0.57 PFLU_RS04425 KpsF/GutQ family sugar-phosphate isomerase — —
Pseudomonas fluorescens SBW25 0.18 PFLU_RS24645 N-acetylglucosamine-6-phosphate deacetylase 0.57 PFLU_RS04425 KpsF/GutQ family sugar-phosphate isomerase — —
Paraburkholderia graminis OAS925 0.18 ABIE53_000689 N-acetylglucosamine-6-phosphate deacetylase 0.48 ABIE53_000723 arabinose-5-phosphate isomerase low > 113
Paraburkholderia sabiae LMG 24235 0.18 QEN71_RS01585 N-acetylglucosamine-6-phosphate deacetylase 0.49 QEN71_RS01780 KpsF/GutQ family sugar-phosphate isomerase low > 153
Pseudomonas simiae WCS417 0.18 PS417_22985 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) 0.58 PS417_04370 D-arabinose 5-phosphate isomerase — —
Herbaspirillum seropedicae SmR1 0.18 HSERO_RS22760 N-acetylglucosamine-6-phosphate deacetylase 0.49 HSERO_RS19830 sugar phosphate isomerase — —
Pseudomonas fluorescens FW300-N2C3 0.17 AO356_17550 N-acetylglucosamine-6-phosphate deacetylase (EC 3.5.1.25) (from data) 0.55 AO356_07010 D-arabinose 5-phosphate isomerase — —
Pseudomonas sp. RS175 0.16 PFR28_03512 N-acetylgalactosamine-6-phosphate deacetylase 0.54 PFR28_00178 Arabinose 5-phosphate isomerase KdsD — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.14 Echvi_4311 N-acetylglucosamine-6-phosphate deacetylase 0.40 Echvi_0165 KpsF/GutQ family protein low > 79

Not shown: 9 genomes with orthologs for b0677 only; 31 genomes with orthologs for b3197 only