Conservation of cofitness between b3958 and b2763 in Escherichia coli BW25113

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3958 argC N-acetyl-gamma-glutamyl-phosphate reductase (NCBI) 1.0 b2763 cysI sulfite reductase, beta subunit, NAD(P)-binding, heme-binding (NCBI) 0.91 6
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04092 N-acetyl-gamma-glutamyl-phosphate reductase 0.99 OHPLBJKB_00970 Sulfite reductase [NADPH] hemoprotein beta-component low > 73
Escherichia coli ECRC62 1.00 BNILDI_05795 argC N-acetyl-gamma-glutamyl-phosphate reductase 1.00 BNILDI_10740 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit
Escherichia coli BL21 1.00 ECD_03843 N-acetyl-gamma-glutamylphosphate reductase, NAD(P)-binding 1.00 ECD_02608 sulfite reductase, beta subunit, NAD(P)-binding, heme-binding low > 60
Escherichia coli ECOR27 1.00 NOLOHH_05730 argC N-acetyl-gamma-glutamyl-phosphate reductase 1.00 NOLOHH_12190 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit low > 57
Escherichia coli ECOR38 0.99 HEPCGN_12230 argC N-acetyl-gamma-glutamyl-phosphate reductase 0.99 HEPCGN_19090 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit low > 85
Escherichia fergusonii Becca 0.99 EFB2_04656 N-acetyl-gamma-glutamyl-phosphate reductase 1.00 EFB2_01154 Sulfite reductase [NADPH] hemoprotein beta-component low > 86
Escherichia coli ECRC98 0.99 JDDGAC_17210 argC N-acetyl-gamma-glutamyl-phosphate reductase 1.00 JDDGAC_24040 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit
Escherichia coli ECRC102 0.99 NIAGMN_11335 argC N-acetyl-gamma-glutamyl-phosphate reductase 1.00 NIAGMN_18145 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit
Escherichia coli ECRC101 0.99 OKFHMN_13585 argC N-acetyl-gamma-glutamyl-phosphate reductase 1.00 OKFHMN_20375 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit
Escherichia coli ECRC99 0.99 KEDOAH_14575 argC N-acetyl-gamma-glutamyl-phosphate reductase 1.00 KEDOAH_07750 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit
Escherichia coli Nissle 1917 0.99 ECOLIN_RS22845 N-acetyl-gamma-glutamyl-phosphate reductase 1.00 ECOLIN_RS15405 assimilatory sulfite reductase (NADPH) hemoprotein subunit low > 52
Escherichia coli ECRC101 0.99 MCAODC_04085 argC N-acetyl-gamma-glutamyl-phosphate reductase 1.00 MCAODC_10900 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF2344 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) 0.95 GFF4819 Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) low > 78
Klebsiella michiganensis M5al 0.91 BWI76_RS00845 N-acetyl-gamma-glutamyl-phosphate reductase 0.95 BWI76_RS22760 sulfite reductase subunit beta 0.84 44
Enterobacter asburiae PDN3 0.90 EX28DRAFT_4420 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) 0.95 EX28DRAFT_2852 sulfite reductase (NADPH) hemoprotein, beta-component 0.74 15
Enterobacter sp. TBS_079 0.89 MPMX20_04522 N-acetyl-gamma-glutamyl-phosphate reductase 0.96 MPMX20_03642 Sulfite reductase [NADPH] hemoprotein beta-component 0.63 71
Serratia liquefaciens MT49 0.82 IAI46_24515 N-acetyl-gamma-glutamyl-phosphate reductase 0.87 IAI46_03690 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.69 71
Rahnella sp. WP5 0.79 EX31_RS14190 N-acetyl-gamma-glutamyl-phosphate reductase 0.82 EX31_RS07900 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.94 44
Dickeya dianthicola 67-19 0.79 HGI48_RS00875 N-acetyl-gamma-glutamyl-phosphate reductase 0.84 HGI48_RS17010 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.73 46
Pectobacterium carotovorum WPP14 0.79 HER17_RS20630 N-acetyl-gamma-glutamyl-phosphate reductase 0.85 HER17_RS04240 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.70 74
Dickeya dadantii 3937 0.78 DDA3937_RS20350 N-acetyl-gamma-glutamyl-phosphate reductase 0.85 DDA3937_RS16940 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.70 45
Pantoea sp. MT58 0.78 IAI47_00905 N-acetyl-gamma-glutamyl-phosphate reductase 0.88 IAI47_04155 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.69 66
Dickeya dianthicola ME23 0.78 DZA65_RS00935 N-acetyl-gamma-glutamyl-phosphate reductase 0.84 DZA65_RS18085 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.66 68
Erwinia tracheiphila SCR3 0.78 LU632_RS19615 argC N-acetyl-gamma-glutamyl-phosphate reductase 0.86 LU632_RS06405 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit low > 74
Vibrio cholerae E7946 ATCC 55056 0.63 CSW01_13380 N-acetyl-gamma-glutamyl-phosphate reductase 0.73 CSW01_02015 assimilatory sulfite reductase (NADPH) hemoprotein subunit low > 62
Alteromonas macleodii MIT1002 0.47 MIT1002_00471 N-acetyl-gamma-glutamyl-phosphate reductase 0.74 MIT1002_03379 Sulfite reductase [NADPH] hemoprotein beta-component
Shewanella sp. ANA-3 0.45 Shewana3_3905 argC N-acetyl-gamma-glutamyl-phosphate reductase (RefSeq) 0.59 Shewana3_0856 sulfite reductase subunit beta (RefSeq) 0.87 41
Shewanella oneidensis MR-1 0.44 SO0275 argC N-acetyl-gamma-glutamyl-phosphate reductase (NCBI ptt file) 0.59 SO3737 cysI sulfite reductase (NADPH) hemoprotein beta-component (cysI) (NCBI ptt file) 0.93 30
Shewanella loihica PV-4 0.44 Shew_0202 argC N-acetyl-gamma-glutamyl-phosphate reductase (RefSeq) 0.58 Shew_0666 sulfite reductase subunit beta (RefSeq) 0.91 44
Shewanella amazonensis SB2B 0.44 Sama_0256 argC N-acetyl-gamma-glutamyl-phosphate reductase (RefSeq) 0.70 Sama_2838 sulfite reductase subunit beta (RefSeq) 0.93 31
Pseudomonas putida KT2440 0.32 PP_0432 N-acetyl-gamma-glutamyl-phosphate reductase 1 0.06 PP_2371 Sulphite reductase hemoprotein, beta subunit low > 96
Pseudomonas fluorescens FW300-N1B4 0.31 Pf1N1B4_2559 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) 0.08 Pf1N1B4_4656 Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2)
Rhodospirillum rubrum S1H 0.31 Rru_A2421 N-acetyl-gamma-glutamyl-phosphate reductase (NCBI) 0.08 Rru_A1931 Ferredoxin--nitrite reductase (NCBI)
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_4836 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) 0.06 Pf6N2E2_2073 Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) low > 103
Herbaspirillum seropedicae SmR1 0.30 HSERO_RS19210 N-acetyl-gamma-glutamyl-phosphate reductase 0.08 HSERO_RS15550 sulfite reductase low > 78
Castellaniella sp019104865 MT123 0.30 ABCV34_RS10590 N-acetyl-gamma-glutamyl-phosphate reductase 0.45 ABCV34_RS00215 assimilatory sulfite reductase (NADPH) hemoprotein subunit
Azospirillum sp. SherDot2 0.27 MPMX19_03843 N-acetyl-gamma-glutamyl-phosphate reductase 0.09 MPMX19_00652 Sulfite reductase [ferredoxin]
Synechococcus elongatus PCC 7942 0.26 Synpcc7942_1433 argC N-acetyl-gamma-glutamyl-phosphate reductase 0.30 Synpcc7942_0019 sir Sulfite reductase, ferredoxin dependent
Azospirillum brasilense Sp245 0.26 AZOBR_RS07795 N-acetyl-gamma-glutamyl-phosphate reductase 0.08 AZOBR_RS10125 sulfite reductase
Dinoroseobacter shibae DFL-12 0.24 Dshi_1759 N-acetyl-gamma-glutamyl-phosphate reductase (RefSeq) 0.08 Dshi_1153 nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein (RefSeq)
Phaeobacter inhibens DSM 17395 0.23 PGA1_c17050 N-acetyl-gamma-glutamyl-phosphate reductase ArgC 0.08 PGA1_c20760 putative nitrite/sulfite reductase
Mycobacterium tuberculosis H37Rv 0.21 Rv1652 Probable N-acetyl-gamma-glutamyl-phoshate reductase ArgC 0.10 Rv2391 Ferredoxin-dependent sulfite reductase SirA
Lysobacter sp. OAE881 0.20 ABIE51_RS13385 N-acetyl-gamma-glutamyl-phosphate reductase 0.46 ABIE51_RS15830 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.98 6
Dyella japonica UNC79MFTsu3.2 0.18 ABZR86_RS08700 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) 0.49 ABZR86_RS05900 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.90 46
Bosea sp. OAE506 0.18 ABIE41_RS15755 N-acetyl-gamma-glutamyl-phosphate reductase 0.07 ABIE41_RS21305 NirA family protein low > 77
Kangiella aquimarina DSM 16071 0.18 B158DRAFT_1979 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) 0.49 B158DRAFT_2161 sulfite reductase (NADPH) beta subunit (EC 1.8.1.2) low > 40
Xanthomonas campestris pv. campestris strain 8004 0.17 Xcc-8004.2322.1 N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) 0.45 Xcc-8004.1257.1 Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) low > 74
Rhodanobacter sp. FW510-T8 0.17 OKGIIK_09435 argC N-acetyl-gamma-glutamyl-phosphate reductase 0.45 OKGIIK_05965 cysI assimilatory sulfite reductase (NADPH) hemoprotein subunit low > 52
Rhodanobacter denitrificans FW104-10B01 0.17 LRK54_RS02385 N-acetyl-gamma-glutamyl-phosphate reductase 0.45 LRK54_RS00925 assimilatory sulfite reductase (NADPH) hemoprotein subunit 0.64 46
Ralstonia solanacearum GMI1000 0.14 RS_RS00700 N-acetyl-gamma-glutamyl-phosphate reductase 0.08 RS_RS12170 nitrite/sulfite reductase
Ralstonia sp. UNC404CL21Col 0.14 ABZR87_RS05600 N-acetyl-gamma-glutamyl-phosphate reductase 0.08 ABZR87_RS00210 nitrite/sulfite reductase low > 80
Ralstonia solanacearum UW163 0.14 UW163_RS03490 N-acetyl-gamma-glutamyl-phosphate reductase 0.08 UW163_RS09070 sulfite reductase
Ralstonia solanacearum IBSBF1503 0.14 RALBFv3_RS10090 N-acetyl-gamma-glutamyl-phosphate reductase 0.08 RALBFv3_RS04600 sulfite reductase low > 76
Ralstonia solanacearum PSI07 0.14 RPSI07_RS23280 N-acetyl-gamma-glutamyl-phosphate reductase 0.08 RPSI07_RS12775 nitrite/sulfite reductase low > 81
Sphingomonas koreensis DSMZ 15582 0.10 Ga0059261_0351 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) 0.08 Ga0059261_1498 Sulfite reductase, beta subunit (hemoprotein) 0.89 59

Not shown: 34 genomes with orthologs for b3958 only; 8 genomes with orthologs for b2763 only