Conservation of cofitness between b1297 and b2517 in Escherichia coli BW25113

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b1297 b1297 putative glutamine synthetase (EC 6.3.1.2) (VIMSS) 1.0 b2517 yfgB predicted enzyme (NCBI) 0.23 14
Escherichia coli ECOR27 1.00 NOLOHH_20130 puuA glutamate-putrescine ligase 1.00 NOLOHH_13360 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 57
Escherichia coli ECRC101 1.00 OKFHMN_02445 puuA glutamate-putrescine ligase 1.00 OKFHMN_21710 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN — —
Escherichia coli ECRC62 1.00 BNILDI_18280 puuA glutamate-putrescine ligase 1.00 BNILDI_12160 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN — —
Escherichia coli ECRC102 1.00 NIAGMN_26615 puuA glutamate-putrescine ligase 1.00 NIAGMN_19480 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN — —
Escherichia coli ECOR38 1.00 HEPCGN_25755 puuA glutamate-putrescine ligase 1.00 HEPCGN_20830 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 85
Escherichia coli ECRC99 1.00 KEDOAH_26330 puuA glutamate-putrescine ligase 1.00 KEDOAH_06510 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN — —
Escherichia coli ECRC101 1.00 MCAODC_15825 puuA glutamate-putrescine ligase 1.00 MCAODC_12240 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN — —
Escherichia coli ECRC98 1.00 JDDGAC_04990 puuA glutamate-putrescine ligase 1.00 JDDGAC_25385 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN — —
Escherichia coli BL21 1.00 ECD_01274 glutamate--putrescine ligase 1.00 ECD_02409 dual specificity 23S rRNA m(2)A2503, tRNA m(2)A37 methyltransferase, SAM-dependent low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_02385 Gamma-glutamylputrescine synthetase PuuA 1.00 OHPLBJKB_01192 Dual-specificity RNA methyltransferase RlmN low > 73
Klebsiella michiganensis M5al 0.95 BWI76_RS10710 Glutamate--putrescine ligase (EC 6.3.1.11) (from data) 0.94 BWI76_RS21095 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 92
Enterobacter asburiae PDN3 0.93 EX28DRAFT_1498 Glutamine synthetase 0.94 EX28DRAFT_0126 23S rRNA (adenine(2503)-C(2))-methyltransferase 0.47 59
Serratia liquefaciens MT49 0.83 IAI46_10560 glutamine synthetase 0.88 IAI46_19290 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 86
Rahnella sp. WP5 0.76 EX31_RS17895 glutamine synthetase 0.86 EX31_RS20525 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 89
Pantoea sp. MT58 0.74 IAI47_07125 glutamine synthetase 0.87 IAI47_05040 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN low > 76
Acinetobacter radioresistens SK82 0.42 MPMX26_02239 Gamma-glutamylputrescine synthetase PuuA 0.54 MPMX26_00426 Dual-specificity RNA methyltransferase RlmN — —
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_29300 gamma-glutamylputrescine synthetase 0.56 AO353_15875 23S rRNA (adenine(2503)-C2)-methyltransferase low > 101
Pseudomonas putida KT2440 0.40 PP_5299 glutamate-putrescine ligase 0.55 PP_0850 Dual-specificity RNA methyltransferase RlmN low > 96
Pseudomonas sp. S08-1 0.40 OH686_11485 glutamine synthetase family protein 0.55 OH686_17515 23S rRNA (adenine(2503)-C(2))-methyltransferase low > 80
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_4354 Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) 0.56 Pf1N1B4_857 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) — —
Pseudomonas stutzeri RCH2 0.40 Psest_4288 Glutamate--putrescine ligase (EC 6.3.1.11) (from data) 0.55 Psest_1259 23S rRNA m2A2503 methyltransferase low > 67
Pseudomonas sp. RS175 0.40 PFR28_04298 Gamma-glutamylputrescine synthetase PuuA 0.55 PFR28_00294 Dual-specificity RNA methyltransferase RlmN low > 88
Marinobacter adhaerens HP15 0.40 HP15_942 glutamate-putrescine ligase 0.53 HP15_1490 conserved hypothetical protein low > 73
Pseudomonas syringae pv. syringae B728a 0.39 Psyr_4868 glutamate--putrescine ligase 0.56 Psyr_1245 23S rRNA m(2)A-2503 methyltransferase 0.28 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.39 Psyr_4868 glutamate--putrescine ligase 0.56 Psyr_1245 23S rRNA m(2)A-2503 methyltransferase low > 86
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_13135 Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) (from data) 0.56 AO356_06605 23S rRNA (adenine(2503)-C2)-methyltransferase low > 104
Pseudomonas fluorescens SBW25-INTG 0.39 PFLU_RS28795 glutamine synthetase 0.55 PFLU_RS24815 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 109
Pseudomonas simiae WCS417 0.39 PS417_27140 Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) (from data) 0.55 PS417_23160 50S rRNA methyltransferase low > 88
Pseudomonas fluorescens SBW25 0.39 PFLU_RS28795 glutamine synthetase 0.55 PFLU_RS24815 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 109
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_925 Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) (from data) 0.56 PfGW456L13_4865 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) low > 87
Enterobacter sp. TBS_079 0.39 MPMX20_03117 Gamma-glutamylputrescine synthetase PuuA 0.94 MPMX20_03395 Dual-specificity RNA methyltransferase RlmN low > 85
Pseudomonas fluorescens FW300-N2E2 0.37 Pf6N2E2_4509 Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) (from data) 0.55 Pf6N2E2_3181 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) — —
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.2202.1 glutamine synthetase family protein 0.50 Xcc-8004.2737.1 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) low > 74
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_03240 glutamine synthetase 0.38 CCNA_00133 radical SAM family enzyme low > 67
Caulobacter crescentus NA1000 0.33 CCNA_03240 glutamine synthetase 0.38 CCNA_00133 radical SAM family enzyme low > 66
Agrobacterium fabrum C58 0.32 Atu0193 glutamine synthetase 0.39 Atu2673 hypothetical protein low > 89
Sinorhizobium meliloti 1021 0.30 SMc01973 glutamine synthetase 0.37 SMc03831 hypothetical protein low > 103
Shewanella amazonensis SB2B 0.30 Sama_1174 glutamate--ammonia ligase (RefSeq) 0.73 Sama_2368 hypothetical protein (RefSeq) low > 62
Rhizobium sp. OAE497 0.28 ABIE40_RS05855 glutamine synthetase family protein 0.38 ABIE40_RS18200 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 107
Rhodospirillum rubrum S1H 0.28 Rru_A1253 Glutamine synthetase, catalytic region (NCBI) 0.42 Rru_A3329 hypothetical protein (NCBI) low > 58
Phaeobacter inhibens DSM 17395 0.27 PGA1_c11540 gamma-glutamylputrescine synthetase PuuA 0.42 PGA1_c36240 ribosomal RNA large subunit methyltransferase N low > 62
Dinoroseobacter shibae DFL-12 0.26 Dshi_2226 Glutamate--putrescine ligase (RefSeq) 0.40 Dshi_3311 radical SAM enzyme, Cfr family (RefSeq) low > 64
Azospirillum brasilense Sp245 0.25 AZOBR_RS08850 glutamine synthetase 0.41 AZOBR_RS00800 50S rRNA methyltransferase low > 97
Paraburkholderia graminis OAS925 0.25 ABIE53_002230 glutamine synthetase 0.50 ABIE53_002744 23S rRNA (adenine2503-C2)-methyltransferase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.25 H281DRAFT_01081 L-glutamine synthetase 0.51 H281DRAFT_00514 23S rRNA m(2)A-2503 methyltransferase — —
Shewanella sp. ANA-3 0.25 Shewana3_3098 L-glutamine synthetase (RefSeq) 0.75 Shewana3_1226 hypothetical protein (RefSeq) low > 73
Azospirillum sp. SherDot2 0.25 MPMX19_04886 Gamma-glutamylputrescine synthetase PuuA 0.40 MPMX19_02413 Dual-specificity RNA methyltransferase RlmN low > 112
Burkholderia phytofirmans PsJN 0.25 BPHYT_RS23160 Gamma-glutamyl-putrescine synthetase (EC 6.3.1.11) (from data) 0.51 BPHYT_RS12590 dual-specificity RNA methyltransferase RlmN low > 109
Paraburkholderia sabiae LMG 24235 0.25 QEN71_RS12935 glutamine synthetase family protein 0.51 QEN71_RS05965 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 153
Shewanella loihica PV-4 0.24 Shew_0972 glutamate--ammonia ligase (RefSeq) 0.73 Shew_1287 hypothetical protein (RefSeq) low > 60
Shewanella oneidensis MR-1 0.24 SO1268 Glutamate--putrescine ligase (EC 6.3.1.11) (from data) 0.75 SO3315 conserved hypothetical protein TIGR00048 (NCBI ptt file) low > 76
Hydrogenophaga sp. GW460-11-11-14-LB1 0.23 GFF2037 glutamine synthetase family protein 0.47 GFF4866 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) low > 90
Pedobacter sp. GW460-11-11-14-LB5 0.17 CA265_RS24865 glutamine synthetase 0.33 CA265_RS19115 23S rRNA (adenine(2503)-C(2))-methyltransferase low > 88
Rhodopseudomonas palustris CGA009 0.17 TX73_007190 glutamine synthetase family protein 0.40 TX73_002060 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 86
Mucilaginibacter yixingensis YX-36 DSM 26809 0.17 ABZR88_RS10470 glutamine synthetase family protein 0.32 ABZR88_RS00655 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN low > 71

Not shown: 1 genomes with orthologs for b1297 only; 45 genomes with orthologs for b2517 only